RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSP3	YOR003W	MIP1	P15801	1254 aa		11.94	□□□□□ -0.5
YSP3	YOR003W	KIN82	P25341	720 aa		11.94	□□□□□ -0.5
YSP3	YOR003W	YEL025C	P39991	1188 aa		11.94	□□□□□ -0.5
YSP3	YOR003W	PSP2	P50109	593 aa	Known RBP	11.94	□□□□□ -0.5
YSP3	YOR003W	SMC6	Q12749	1114 aa		11.94	□□□□□ -0.5
YSP3	YOR003W	YDR524C-B	Q3E6R4	66 aa		11.94	□□□□□ -0.5
YSP3	YOR003W	MOT1	P32333	1867 aa		11.93	□□□□□ -0.5
YSP3	YOR003W	PIH1	P38768	344 aa		11.92	□□□□□ -0.5
YSP3	YOR003W	FIR1	P40020	876 aa		11.92	□□□□□ -0.5
YSP3	YOR003W	FIS1	P40515	155 aa		11.92	□□□□□ -0.5
YSP3	YOR003W	UBA2	P52488	636 aa		11.92	□□□□□ -0.5
YSP3	YOR003W	RTC4	P53850	401 aa		11.92	□□□□□ -0.5
YSP3	YOR003W	MMR1	Q06324	491 aa		11.92	□□□□□ -0.5
YSP3	YOR003W	SNA3	P14359	133 aa		11.91	□□□□□ -0.5
YSP3	YOR003W	FRS2	P15625	503 aa	Known RBP	11.91	□□□□□ -0.5
YSP3	YOR003W	IRE1	P32361	1115 aa		11.91	□□□□□ -0.5
YSP3	YOR003W	PET10	P36139	283 aa		11.91	□□□□□ -0.5
YSP3	YOR003W	INP51	P40559	946 aa	Known RBP	11.91	□□□□□ -0.5
YSP3	YOR003W	SAD1	P43589	448 aa		11.91	□□□□□ -0.5
YSP3	YOR003W	CBK1	P53894	756 aa		11.91	□□□□□ -0.5
YSP3	YOR003W	SRD1	P09007	221 aa		11.9	□□□□□ -0.5
YSP3	YOR003W	DUR3	P33413	735 aa		11.9	□□□□□ -0.5
YSP3	YOR003W	PEX19	Q07418	342 aa		11.9	□□□□□ -0.5
YSP3	YOR003W	DED1	P06634	604 aa	Known RBP	11.89	□□□□□ -0.51
YSP3	YOR003W	FAR11	P53917	953 aa		11.89	□□□□□ -0.51
YSP3	YOR003W	PSR2	Q07949	397 aa		11.89	□□□□□ -0.51
YSP3	YOR003W	HIS4	P00815	799 aa	Known RBP	11.88	□□□□□ -0.51
YSP3	YOR003W	YEL076C-A	P0CX16	216 aa		11.88	□□□□□ -0.51
YSP3	YOR003W	YLR464W	P0CX17	216 aa		11.88	□□□□□ -0.51
YSP3	YOR003W	PRP22	P24384	1145 aa	Known RBP	11.88	□□□□□ -0.51
YSP3	YOR003W	SIP3	P38717	1229 aa		11.88	□□□□□ -0.51
YSP3	YOR003W	BDH2	P39713	417 aa		11.88	□□□□□ -0.51
YSP3	YOR003W	YEL076C	P39971	216 aa		11.88	□□□□□ -0.51
YSP3	YOR003W	AZR1	P50080	613 aa		11.88	□□□□□ -0.51
YSP3	YOR003W	COG8	Q04632	607 aa		11.88	□□□□□ -0.51
YSP3	YOR003W	RAM2	P29703	316 aa		11.87	□□□□□ -0.51
YSP3	YOR003W	SMY2	P32909	740 aa	Known RBP	11.87	□□□□□ -0.51
YSP3	YOR003W	RPN3	P40016	523 aa	Known RBP	11.87	□□□□□ -0.51
YSP3	YOR003W	SGM1	P47166	707 aa		11.87	□□□□□ -0.51
YSP3	YOR003W	CLA4	P48562	842 aa		11.87	□□□□□ -0.51
YSP3	YOR003W	MDR1	P53258	950 aa		11.87	□□□□□ -0.51
YSP3	YOR003W	UBC1	P21734	215 aa	Known RBP	11.86	□□□□□ -0.51
YSP3	YOR003W	MCM3	P24279	971 aa	Known RBP	11.86	□□□□□ -0.51
YSP3	YOR003W	DJP1	P40564	432 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	ROG3	P43602	733 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	ACF4	P47129	309 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	HST1	P53685	503 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	YNL115C	P53925	644 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	FMP30	Q02883	468 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	LSP1	Q12230	341 aa	Known RBP	11.86	□□□□□ -0.51
YSP3	YOR003W	HEM1	P09950	548 aa	Predicted RBP	11.86	□□□□□ -0.51
YSP3	YOR003W	DID4	P36108	232 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	TVP23	P38962	199 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	DAK2	P43550	591 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	YFL040W	P43562	540 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	GUP1	P53154	560 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	FUS2	Q05670	677 aa		11.86	□□□□□ -0.51
YSP3	YOR003W	NOC3	Q07896	663 aa	Predicted RBP	11.86	□□□□□ -0.51
YSP3	YOR003W	HIP1	P06775	603 aa		11.85	□□□□□ -0.51
YSP3	YOR003W	AFT1	P22149	690 aa		11.85	□□□□□ -0.51
YSP3	YOR003W	RME1	P32338	300 aa	Known RBP	11.85	□□□□□ -0.51
YSP3	YOR003W	VPS24	P36095	224 aa	Known RBP	11.85	□□□□□ -0.51
YSP3	YOR003W	ERC1	P38767	581 aa		11.85	□□□□□ -0.51
YSP3	YOR003W	EAF5	P39995	279 aa		11.85	□□□□□ -0.51
YSP3	YOR003W	FYV10	P40492	516 aa		11.85	□□□□□ -0.51
YSP3	YOR003W	THI6	P41835	540 aa		11.85	□□□□□ -0.51
YSP3	YOR003W	CUE3	P53137	624 aa	Known RBP	11.85	□□□□□ -0.51
YSP3	YOR003W	SMC5	Q08204	1093 aa		11.85	□□□□□ -0.51
YSP3	YOR003W	PFK1	P16861	987 aa	Known RBP	11.84	□□□□□ -0.51
YSP3	YOR003W	CKA2	P19454	339 aa		11.84	□□□□□ -0.51
YSP3	YOR003W	CDC15	P27636	974 aa		11.84	□□□□□ -0.51
YSP3	YOR003W	POT1	P27796	417 aa	Known RBP RIP-Chip data	11.84	□□□□□ -0.51	not detected
YSP3	YOR003W	WHI3	P34761	661 aa	Known RBP	11.84	□□□□□ -0.51
YSP3	YOR003W	ATG19	P35193	415 aa		11.84	□□□□□ -0.51
YSP3	YOR003W	AVT1	P47082	602 aa		11.84	□□□□□ -0.51
YSP3	YOR003W	TPO2	P53283	614 aa		11.84	□□□□□ -0.51
YSP3	YOR003W	NCS2	P53923	493 aa	Predicted RBP	11.84	□□□□□ -0.51
YSP3	YOR003W	YML020W	Q03722	664 aa		11.84	□□□□□ -0.51
YSP3	YOR003W	LDB19	Q12502	818 aa		11.84	□□□□□ -0.51
YSP3	YOR003W	ISY1	P21374	235 aa	Predicted RBP	11.83	□□□□□ -0.52
YSP3	YOR003W	EFT1	P32324	842 aa	Known RBP	11.83	□□□□□ -0.52
YSP3	YOR003W	ALD5	P40047	520 aa	Known RBP	11.83	□□□□□ -0.52
YSP3	YOR003W	ROD1	Q02805	837 aa		11.83	□□□□□ -0.52
YSP3	YOR003W	VMS1	Q04311	632 aa	Known RBP	11.83	□□□□□ -0.52
YSP3	YOR003W	COQ9	Q05779	260 aa		11.83	□□□□□ -0.52
YSP3	YOR003W	BMH1	P29311	267 aa	Known RBP	11.82	□□□□□ -0.52
YSP3	YOR003W	PGM2	P37012	569 aa	Known RBP	11.82	□□□□□ -0.52
YSP3	YOR003W	GRS1	P38088	690 aa	Known RBP	11.82	□□□□□ -0.52
YSP3	YOR003W	PPS1	P38148	807 aa		11.82	□□□□□ -0.52
YSP3	YOR003W	RFT1	P38206	574 aa	Predicted RBP	11.82	□□□□□ -0.52
YSP3	YOR003W	ARK1	P53974	638 aa		11.82	□□□□□ -0.52
YSP3	YOR003W	FOB1	O13329	566 aa		11.81	□□□□□ -0.52
YSP3	YOR003W	TCP1	P12612	559 aa	Known RBP	11.81	□□□□□ -0.52
YSP3	YOR003W	MSS51	P32335	436 aa		11.81	□□□□□ -0.52
YSP3	YOR003W	GUA1	P38625	525 aa	Known RBP	11.81	□□□□□ -0.52
YSP3	YOR003W	NUP82	P40368	713 aa		11.81	□□□□□ -0.52
YSP3	YOR003W	APC11	Q12157	165 aa		11.81	□□□□□ -0.52
YSP3	YOR003W	RIF1	P29539	1916 aa		11.8	□□□□□ -0.52
YSP3	YOR003W	DBP5	P20449	482 aa	Known RBP	11.8	□□□□□ -0.52
YSP3	YOR003W	CAD1	P24813	409 aa	Known RBP	11.8	□□□□□ -0.52

Retrieved 100 of 5,963 RNA–protein pairs in 97.6 ms