RNA–Protein interactions for RNA: YNL073W

MSK1, Transcript of Mitochondrial lysine-tRNA synthetase, yeast

Gene MSK1, Length 1,731 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSK1	YNL073W	VTC2	P43585	828 aa		4.62	□□□□□ -1.67
MSK1	YNL073W	SCS3	P53012	380 aa		4.62	□□□□□ -1.67
MSK1	YNL073W	SDA1	P53313	767 aa	Known RBP	4.62	□□□□□ -1.67
MSK1	YNL073W	BRE5	P53741	515 aa	Known RBP	4.62	□□□□□ -1.67
MSK1	YNL073W	CBK1	P53894	756 aa		4.62	□□□□□ -1.67
MSK1	YNL073W	PIB1	Q06651	286 aa		4.62	□□□□□ -1.67
MSK1	YNL073W	CRD1	Q07560	283 aa		4.62	□□□□□ -1.67
MSK1	YNL073W	SRD1	P09007	221 aa		4.61	□□□□□ -1.67
MSK1	YNL073W	KEX1	P09620	729 aa		4.61	□□□□□ -1.67
MSK1	YNL073W	RGP1	P16664	663 aa		4.61	□□□□□ -1.67
MSK1	YNL073W	HIR1	P32479	840 aa		4.61	□□□□□ -1.67
MSK1	YNL073W	IME2	P32581	645 aa		4.61	□□□□□ -1.67
MSK1	YNL073W	UIP5	P36137	443 aa		4.61	□□□□□ -1.67
MSK1	YNL073W	CCT5	P40413	562 aa	Known RBP	4.61	□□□□□ -1.67
MSK1	YNL073W	FYV10	P40492	516 aa		4.61	□□□□□ -1.67
MSK1	YNL073W	BRE2	P43132	505 aa		4.61	□□□□□ -1.67
MSK1	YNL073W	RPS7B	P48164	190 aa	Known RBP	4.61	□□□□□ -1.67
MSK1	YNL073W	DAK1	P54838	584 aa	Known RBP	4.61	□□□□□ -1.67
MSK1	YNL073W	SEC5	P89102	971 aa		4.61	□□□□□ -1.67
MSK1	YNL073W	YPL034W	Q03083	165 aa		4.61	□□□□□ -1.67
MSK1	YNL073W	MSC2	Q03455	724 aa		4.61	□□□□□ -1.67
MSK1	YNL073W	HIS4	P00815	799 aa	Known RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	TUF1	P02992	437 aa	Known RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	YEL076C-A	P0CX16	216 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	YLR464W	P0CX17	216 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	TCP1	P12612	559 aa	Known RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	FRS2	P15625	503 aa	Known RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	ISY1	P21374	235 aa	Predicted RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	UBC1	P21734	215 aa	Known RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	WHI3	P34761	661 aa	Known RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	MAC1	P35192	417 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	YEL076C	P39971	216 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	CIR1	P42940	261 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	ROD1	Q02805	837 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	COG8	Q04632	607 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	CUR1	Q06469	252 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	YLL058W	Q12198	575 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	LDB19	Q12502	818 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	RTP1	Q12751	981 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	SUP45	P12385	437 aa	Known RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	MSP1	P28737	362 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	EFT1	P32324	842 aa	Known RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	YKT6	P36015	200 aa	Known RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	FLR1	P38124	548 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	ALD5	P40047	520 aa	Known RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	RSM25	P40496	264 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	YPT11	P48559	417 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	UBA2	P52488	636 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	DIP5	P53388	608 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	CUS1	Q02554	436 aa	Predicted RBP	4.6	□□□□□ -1.67
MSK1	YNL073W	YLH47	Q06493	454 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	YPR148C	Q06523	435 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	SMC5	Q08204	1093 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	ATG11	Q12527	1178 aa		4.6	□□□□□ -1.67
MSK1	YNL073W	MYO1	P08964	1928 aa		4.59	□□□□□ -1.67
MSK1	YNL073W	MAS2	P11914	482 aa		4.59	□□□□□ -1.67
MSK1	YNL073W	MIP1	P15801	1254 aa		4.59	□□□□□ -1.67
MSK1	YNL073W	PET10	P36139	283 aa		4.59	□□□□□ -1.67
MSK1	YNL073W	SIP3	P38717	1229 aa		4.59	□□□□□ -1.67
MSK1	YNL073W	JJJ3	P47138	172 aa		4.59	□□□□□ -1.67
MSK1	YNL073W	CAF130	P53280	1122 aa	Predicted RBP	4.59	□□□□□ -1.67
MSK1	YNL073W	PGA2	P53903	129 aa		4.59	□□□□□ -1.67
MSK1	YNL073W	KRE33	P53914	1056 aa	Known RBP	4.59	□□□□□ -1.67
MSK1	YNL073W	COQ9	Q05779	260 aa		4.59	□□□□□ -1.67
MSK1	YNL073W	ADY4	Q05955	493 aa		4.59	□□□□□ -1.67
MSK1	YNL073W	PCK1	P10963	549 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	COT1	P32798	439 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	BUD2	P33314	1104 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	DUR3	P33413	735 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	EBP2	P36049	427 aa	Known RBP	4.58	□□□□□ -1.68
MSK1	YNL073W	POA1	P38218	177 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	RPN3	P40016	523 aa	Known RBP	4.58	□□□□□ -1.68
MSK1	YNL073W	FIR1	P40020	876 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	VID30	P53076	958 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	HFI1	Q12060	488 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	HIF1	Q12373	385 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	YDR461C-A	Q2V2P7	80 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	DED1	P06634	604 aa	Known RBP	4.58	□□□□□ -1.68
MSK1	YNL073W	PFK1	P16861	987 aa	Known RBP	4.58	□□□□□ -1.68
MSK1	YNL073W	MSS51	P32335	436 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	DPH2	P32461	534 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	SMY2	P32909	740 aa	Known RBP	4.58	□□□□□ -1.68
MSK1	YNL073W	VPS35	P34110	944 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	ATG19	P35193	415 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	PAM1	P37304	830 aa	Known RBP	4.58	□□□□□ -1.68
MSK1	YNL073W	GUA1	P38625	525 aa	Known RBP	4.58	□□□□□ -1.68
MSK1	YNL073W	CLA4	P48562	842 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	AZR1	P50080	613 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	PSP2	P50109	593 aa	Known RBP	4.58	□□□□□ -1.68
MSK1	YNL073W	NCS2	P53923	493 aa	Predicted RBP	4.58	□□□□□ -1.68
MSK1	YNL073W	SVF1	Q05515	481 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	GPI13	Q07830	1017 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	MAM3	Q12296	706 aa		4.58	□□□□□ -1.68
MSK1	YNL073W	GPA1	P08539	472 aa		4.57	□□□□□ -1.68
MSK1	YNL073W	RAM2	P29703	316 aa		4.57	□□□□□ -1.68
MSK1	YNL073W	IRE1	P32361	1115 aa		4.57	□□□□□ -1.68
MSK1	YNL073W	PGM2	P37012	569 aa	Known RBP	4.57	□□□□□ -1.68
MSK1	YNL073W	UBP13	P38187	747 aa		4.57	□□□□□ -1.68
MSK1	YNL073W	BCD1	P38772	366 aa		4.57	□□□□□ -1.68
MSK1	YNL073W	GUP1	P53154	560 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 117.5 ms