RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C SAF1P38352 637 aa6.91□□□□□ -1.3
CTF18YMR078C BUL2Q03758 920 aaKnown RBP6.91□□□□□ -1.3
CTF18YMR078C YBR284WP38150 797 aa6.91□□□□□ -1.3
CTF18YMR078C SIT1P39980 628 aa6.91□□□□□ -1.3
CTF18YMR078C MAL11P53048 616 aa6.91□□□□□ -1.3
CTF18YMR078C TNA1P53322 534 aa6.91□□□□□ -1.3
CTF18YMR078C CDC12P32468 407 aaKnown RBP6.9□□□□□ -1.3
CTF18YMR078C GEM1P39722 662 aa6.9□□□□□ -1.3
CTF18YMR078C ICP55P40051 511 aa6.9□□□□□ -1.3
CTF18YMR078C OYE3P41816 400 aaPredicted RBP6.9□□□□□ -1.3
CTF18YMR078C CIT3P43635 486 aa6.89□□□□□ -1.31
CTF18YMR078C ERT1P38140 529 aa6.89□□□□□ -1.31
CTF18YMR078C YHL012WP38709 493 aa6.89□□□□□ -1.31
CTF18YMR078C AAR2P32357 355 aaPredicted RBP6.88□□□□□ -1.31
CTF18YMR078C PEX7P39108 375 aa6.88□□□□□ -1.31
CTF18YMR078C MTC3P53077 123 aa6.88□□□□□ -1.31
CTF18YMR078C YPL034WQ03083 165 aa6.88□□□□□ -1.31
CTF18YMR078C YDL124WQ07551 312 aaKnown RBP6.88□□□□□ -1.31
CTF18YMR078C YLR122CQ12312 125 aa6.88□□□□□ -1.31
CTF18YMR078C MSD1P15179 658 aaKnown RBP6.88□□□□□ -1.31
CTF18YMR078C NPP1P25353 742 aa6.88□□□□□ -1.31
CTF18YMR078C PRO1P32264 428 aa6.88□□□□□ -1.31
CTF18YMR078C THI4P32318 326 aa6.88□□□□□ -1.31
CTF18YMR078C BI4P03879 638 aa6.87□□□□□ -1.31
CTF18YMR078C YPR071WQ12346 211 aa6.87□□□□□ -1.31
CTF18YMR078C PIK1P39104 1066 aa6.86□□□□□ -1.31
CTF18YMR078C MNN1P39106 762 aa6.86□□□□□ -1.31
CTF18YMR078C RCM1P53972 490 aa6.86□□□□□ -1.31
CTF18YMR078C PET10P36139 283 aa6.86□□□□□ -1.31
CTF18YMR078C NPP2P39997 493 aa6.86□□□□□ -1.31
CTF18YMR078C UBP6P43593 499 aaKnown RBP6.86□□□□□ -1.31
CTF18YMR078C COQ4O13525 335 aa6.85□□□□□ -1.31
CTF18YMR078C SRO9P25567 434 aaKnown RBP6.85□□□□□ -1.31
CTF18YMR078C YOR059CQ08448 450 aaKnown RBP6.85□□□□□ -1.31
CTF18YMR078C PPH3P32345 308 aa6.85□□□□□ -1.31
CTF18YMR078C CDC11P32458 415 aa6.85□□□□□ -1.31
CTF18YMR078C GDH3P39708 457 aa6.85□□□□□ -1.31
CTF18YMR078C MSH2P25847 964 aa6.84□□□□□ -1.31
CTF18YMR078C MDL2P33311 773 aa6.84□□□□□ -1.31
CTF18YMR078C FPR3P38911 411 aaKnown RBP6.84□□□□□ -1.31
CTF18YMR078C SAH1P39954 449 aaKnown RBP6.84□□□□□ -1.31
CTF18YMR078C RSC58Q07979 502 aa6.84□□□□□ -1.31
CTF18YMR078C CHS2P14180 963 aa6.84□□□□□ -1.32
CTF18YMR078C HSV2P50079 448 aaPredicted RBP6.84□□□□□ -1.32
CTF18YMR078C SRP1Q02821 542 aaKnown RBP6.84□□□□□ -1.32
CTF18YMR078C MDM38Q08179 573 aa6.84□□□□□ -1.32
CTF18YMR078C TRE1Q08919 783 aa6.84□□□□□ -1.32
CTF18YMR078C COQ2P32378 372 aa6.83□□□□□ -1.32
CTF18YMR078C YRO2P38079 344 aa6.83□□□□□ -1.32
CTF18YMR078C CCZ1P38273 704 aa6.83□□□□□ -1.32
CTF18YMR078C TOK1P40310 691 aa6.83□□□□□ -1.32
CTF18YMR078C TOM70P07213 617 aaKnown RBP6.82□□□□□ -1.32
CTF18YMR078C GCD1P09032 578 aaPredicted RBP6.82□□□□□ -1.32
CTF18YMR078C ACE2P21192 770 aa6.82□□□□□ -1.32
CTF18YMR078C MSB1P21339 1137 aaKnown RBP6.82□□□□□ -1.32
CTF18YMR078C YJR142WP47173 342 aa6.82□□□□□ -1.32
CTF18YMR078C TPO2P53283 614 aa6.82□□□□□ -1.32
CTF18YMR078C YLL058WQ12198 575 aa6.82□□□□□ -1.32
CTF18YMR078C TSL1P38427 1098 aaKnown RBP6.82□□□□□ -1.32
CTF18YMR078C GIC1P38785 314 aa6.82□□□□□ -1.32
CTF18YMR078C LCD1Q04377 747 aa6.82□□□□□ -1.32
CTF18YMR078C NTG2Q08214 380 aa6.82□□□□□ -1.32
CTF18YMR078C ADE8P04161 214 aa6.81□□□□□ -1.32
CTF18YMR078C POB3Q04636 552 aaKnown RBP6.81□□□□□ -1.32
CTF18YMR078C ATG13Q06628 738 aa6.81□□□□□ -1.32
CTF18YMR078C ABZ1P37254 787 aaPredicted RBP6.81□□□□□ -1.32
CTF18YMR078C YGR130CP53278 816 aa6.81□□□□□ -1.32
CTF18YMR078C PUS1Q12211 544 aaKnown RBP6.81□□□□□ -1.32
CTF18YMR078C DOM34P33309 386 aa6.8□□□□□ -1.32
CTF18YMR078C CCT8P47079 568 aaKnown RBP6.8□□□□□ -1.32
CTF18YMR078C SRT1Q03175 343 aa6.8□□□□□ -1.32
CTF18YMR078C MEF1P25039 761 aa6.8□□□□□ -1.32
CTF18YMR078C KAE1P36132 386 aa6.8□□□□□ -1.32
CTF18YMR078C PTC7P38797 343 aa6.8□□□□□ -1.32
CTF18YMR078C GTS1P40956 396 aa6.79□□□□□ -1.32
CTF18YMR078C SSY1Q03770 852 aa6.79□□□□□ -1.32
CTF18YMR078C XYL2Q07993 356 aa6.79□□□□□ -1.32
CTF18YMR078C TRP3P00937 484 aa6.78□□□□□ -1.32
CTF18YMR078C THS1P04801 734 aaKnown RBP6.78□□□□□ -1.32
CTF18YMR078C GYP7P48365 746 aa6.78□□□□□ -1.32
CTF18YMR078C HFM1P51979 1187 aa6.78□□□□□ -1.32
CTF18YMR078C MDM12Q92328 271 aa6.78□□□□□ -1.32
CTF18YMR078C NOP14Q99207 810 aaKnown RBP6.78□□□□□ -1.32
CTF18YMR078C RRT14P40470 206 aa6.78□□□□□ -1.32
CTF18YMR078C YKE2P52553 114 aa6.78□□□□□ -1.32
CTF18YMR078C SFB2P53953 876 aa6.78□□□□□ -1.32
CTF18YMR078C DNM1P54861 757 aa6.78□□□□□ -1.32
CTF18YMR078C SDH1Q00711 640 aa6.78□□□□□ -1.32
CTF18YMR078C RIB2Q12362 591 aaKnown RBP6.78□□□□□ -1.32
CTF18YMR078C AIM26P32858 118 aa6.77□□□□□ -1.33
CTF18YMR078C GYP8P43570 497 aa6.77□□□□□ -1.33
CTF18YMR078C UGO1Q03327 502 aa6.77□□□□□ -1.33
CTF18YMR078C NBA1Q08229 501 aaKnown RBP6.77□□□□□ -1.33
CTF18YMR078C SVS1Q12254 260 aa6.77□□□□□ -1.33
CTF18YMR078C REC104P33323 182 aa6.77□□□□□ -1.33
CTF18YMR078C ALG2P43636 503 aa6.77□□□□□ -1.33
CTF18YMR078C TY4A-JP47023 414 aa6.77□□□□□ -1.33
CTF18YMR078C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
CTF18YMR078C RSB1Q08417 382 aa6.77□□□□□ -1.33
CTF18YMR078C YKR078WP36158 585 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms