RNA–Protein interactions for RNA: YLR150W

STM1, Transcript of Protein required for optimal translation under nutrient stress, yeast

Gene STM1, Length 822 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STM1	YLR150W	LTV1	P34078	463 aa		6.31	□□□□□ -1.4
STM1	YLR150W	SLI15	P38283	698 aa		6.31	□□□□□ -1.4
STM1	YLR150W	TIF4631	P39935	952 aa	Known RBP	6.31	□□□□□ -1.4
STM1	YLR150W	VFA1	P40080	203 aa		6.31	□□□□□ -1.4
STM1	YLR150W	NDC80	P40460	691 aa		6.31	□□□□□ -1.4
STM1	YLR150W	SHQ1	P40486	507 aa	Predicted RBP	6.31	□□□□□ -1.4
STM1	YLR150W	FET4	P40988	552 aa		6.31	□□□□□ -1.4
STM1	YLR150W	RRB1	Q04225	511 aa	Known RBP	6.31	□□□□□ -1.4
STM1	YLR150W	AIM7	Q12156	149 aa		6.31	□□□□□ -1.4
STM1	YLR150W	SEC23	P15303	768 aa	Known RBP	6.3	□□□□□ -1.4
STM1	YLR150W	PFK1	P16861	987 aa	Known RBP	6.3	□□□□□ -1.4
STM1	YLR150W	RPC53	P25441	422 aa		6.3	□□□□□ -1.4
STM1	YLR150W	ISW1	P38144	1129 aa		6.3	□□□□□ -1.4
STM1	YLR150W	REI1	P38344	393 aa	Predicted RBP	6.3	□□□□□ -1.4
STM1	YLR150W	SIP3	P38717	1229 aa		6.3	□□□□□ -1.4
STM1	YLR150W	ACA1	P39970	489 aa		6.3	□□□□□ -1.4
STM1	YLR150W	BIM1	P40013	344 aa		6.3	□□□□□ -1.4
STM1	YLR150W	NIT1	P40447	199 aa		6.3	□□□□□ -1.4
STM1	YLR150W	IES1	P43579	692 aa		6.3	□□□□□ -1.4
STM1	YLR150W	ROG3	P43602	733 aa		6.3	□□□□□ -1.4
STM1	YLR150W	OYE2	Q03558	400 aa	Known RBP	6.3	□□□□□ -1.4
STM1	YLR150W	UTP5	Q04177	643 aa	Known RBP	6.3	□□□□□ -1.4
STM1	YLR150W	RBA50	Q04418	439 aa		6.3	□□□□□ -1.4
STM1	YLR150W	SML1	Q04964	104 aa		6.3	□□□□□ -1.4
STM1	YLR150W	IOC2	Q12072	812 aa		6.3	□□□□□ -1.4
STM1	YLR150W	ERG12	P07277	443 aa		6.29	□□□□□ -1.4
STM1	YLR150W	PDC6	P26263	563 aa	Known RBP	6.29	□□□□□ -1.4
STM1	YLR150W	GLC3	P32775	704 aa		6.29	□□□□□ -1.4
STM1	YLR150W	XRS2	P33301	854 aa		6.29	□□□□□ -1.4
STM1	YLR150W	MCX1	P38323	520 aa	Predicted RBP	6.29	□□□□□ -1.4
STM1	YLR150W	TPS3	P38426	1054 aa	Known RBP	6.29	□□□□□ -1.4
STM1	YLR150W	CCC2	P38995	1004 aa		6.29	□□□□□ -1.4
STM1	YLR150W	ULP2	P40537	1034 aa	Predicted RBP	6.29	□□□□□ -1.4
STM1	YLR150W	YGR117C	P53270	476 aa		6.29	□□□□□ -1.4
STM1	YLR150W	SOL4	P53315	255 aa		6.29	□□□□□ -1.4
STM1	YLR150W	ORC4	P54791	529 aa		6.29	□□□□□ -1.4
STM1	YLR150W	VAC14	Q06708	880 aa		6.29	□□□□□ -1.4
STM1	YLR150W	RKM4	Q12504	494 aa		6.29	□□□□□ -1.4
STM1	YLR150W	TOM70	P07213	617 aa	Known RBP	6.28	□□□□□ -1.4
STM1	YLR150W	PPR1	P07272	904 aa	Predicted RBP	6.28	□□□□□ -1.4
STM1	YLR150W	SSB1	P11484	613 aa	Known RBP	6.28	□□□□□ -1.4
STM1	YLR150W	RAD57	P25301	460 aa		6.28	□□□□□ -1.4
STM1	YLR150W	DPB3	P27344	201 aa		6.28	□□□□□ -1.4
STM1	YLR150W	SSB2	P40150	613 aa	Known RBP	6.28	□□□□□ -1.4
STM1	YLR150W	HUL4	P40985	892 aa		6.28	□□□□□ -1.4
STM1	YLR150W	BRE2	P43132	505 aa		6.28	□□□□□ -1.4
STM1	YLR150W	YFL034W	P43564	1073 aa		6.28	□□□□□ -1.4
STM1	YLR150W	ULI1	P43604	169 aa		6.28	□□□□□ -1.4
STM1	YLR150W	RSM7	P47150	247 aa		6.28	□□□□□ -1.4
STM1	YLR150W	NBP1	P52919	319 aa	Predicted RBP	6.28	□□□□□ -1.4
STM1	YLR150W	DIP5	P53388	608 aa		6.28	□□□□□ -1.4
STM1	YLR150W	BOP3	P53958	396 aa		6.28	□□□□□ -1.4
STM1	YLR150W	YDL057W	Q07379	328 aa		6.28	□□□□□ -1.4
STM1	YLR150W	YLR001C	Q07895	862 aa		6.28	□□□□□ -1.4
STM1	YLR150W	NEW1	Q08972	1196 aa	Known RBP	6.28	□□□□□ -1.4
STM1	YLR150W	ARP6	Q12509	438 aa		6.28	□□□□□ -1.4
STM1	YLR150W	NOP14	Q99207	810 aa	Known RBP	6.28	□□□□□ -1.4
STM1	YLR150W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.27	□□□□□ -1.41	not detected
STM1	YLR150W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.27	□□□□□ -1.41	not detected
STM1	YLR150W	MAK16	P10962	306 aa	Predicted RBP	6.27	□□□□□ -1.41
STM1	YLR150W	SUP45	P12385	437 aa	Known RBP	6.27	□□□□□ -1.41
STM1	YLR150W	DAL7	P21826	554 aa		6.27	□□□□□ -1.41
STM1	YLR150W	STE11	P23561	717 aa		6.27	□□□□□ -1.41
STM1	YLR150W	CDC60	P26637	1090 aa	Known RBP	6.27	□□□□□ -1.41
STM1	YLR150W	SRB4	P32569	687 aa		6.27	□□□□□ -1.41
STM1	YLR150W	UGA4	P32837	571 aa		6.27	□□□□□ -1.41
STM1	YLR150W	NIP100	P33420	868 aa		6.27	□□□□□ -1.41
STM1	YLR150W	PHO88	P38264	188 aa	Predicted RBP	6.27	□□□□□ -1.41
STM1	YLR150W	SMC2	P38989	1170 aa	Known RBP	6.27	□□□□□ -1.41
STM1	YLR150W	UBP5	P39944	805 aa		6.27	□□□□□ -1.41
STM1	YLR150W	VHR2	P40041	505 aa		6.27	□□□□□ -1.41
STM1	YLR150W	NUP82	P40368	713 aa		6.27	□□□□□ -1.41
STM1	YLR150W	EFM4	P40516	257 aa		6.27	□□□□□ -1.41
STM1	YLR150W	FPK1	P53739	893 aa		6.27	□□□□□ -1.41
STM1	YLR150W	TOF1	P53840	1238 aa		6.27	□□□□□ -1.41
STM1	YLR150W	YML037C	Q03703	340 aa		6.27	□□□□□ -1.41
STM1	YLR150W	FUS2	Q05670	677 aa		6.27	□□□□□ -1.41
STM1	YLR150W	OPY2	Q06810	360 aa		6.27	□□□□□ -1.41
STM1	YLR150W	PLP2	Q12017	286 aa		6.27	□□□□□ -1.41
STM1	YLR150W	THS1	P04801	734 aa	Known RBP	6.26	□□□□□ -1.41
STM1	YLR150W	SRD1	P09007	221 aa		6.26	□□□□□ -1.41
STM1	YLR150W	SAM1	P10659	382 aa	Known RBP	6.26	□□□□□ -1.41
STM1	YLR150W	RAD18	P10862	487 aa		6.26	□□□□□ -1.41
STM1	YLR150W	GAL2	P13181	574 aa		6.26	□□□□□ -1.41
STM1	YLR150W	TUP1	P16649	713 aa		6.26	□□□□□ -1.41
STM1	YLR150W	APL1	P27351	700 aa		6.26	□□□□□ -1.41
STM1	YLR150W	TRK2	P28584	889 aa		6.26	□□□□□ -1.41
STM1	YLR150W	MRF1	P30775	413 aa	Predicted RBP	6.26	□□□□□ -1.41
STM1	YLR150W	YEL043W	P32618	956 aa		6.26	□□□□□ -1.41
STM1	YLR150W	SMC1	P32908	1225 aa		6.26	□□□□□ -1.41
STM1	YLR150W	PGM1	P33401	570 aa	Known RBP	6.26	□□□□□ -1.41
STM1	YLR150W	JNM1	P36224	373 aa		6.26	□□□□□ -1.41
STM1	YLR150W	CCM1	P48237	864 aa	Predicted RBP	6.26	□□□□□ -1.41
STM1	YLR150W	LIF1	P53150	421 aa		6.26	□□□□□ -1.41
STM1	YLR150W	SEC5	P89102	971 aa		6.26	□□□□□ -1.41
STM1	YLR150W	ATG23	Q06671	453 aa		6.26	□□□□□ -1.41
STM1	YLR150W	YPR078C	Q06813	372 aa		6.26	□□□□□ -1.41
STM1	YLR150W	WHI4	Q07655	649 aa	Known RBP	6.26	□□□□□ -1.41
STM1	YLR150W	TCO89	Q08921	799 aa		6.26	□□□□□ -1.41
STM1	YLR150W	YPL277C	Q08989	487 aa		6.26	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms