RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W PUS7Q08647 676 aaKnown RBP1.59□□□□□ -2.16
PRP16YKR086W MYO4P32492 1471 aa1.58□□□□□ -2.16
PRP16YKR086W AIM26P32858 118 aa1.58□□□□□ -2.16
PRP16YKR086W NIT1P40447 199 aa1.58□□□□□ -2.16
PRP16YKR086W ESF1Q06344 628 aaKnown RBP1.58□□□□□ -2.16
PRP16YKR086W YOR131CQ12486 218 aa1.58□□□□□ -2.16
PRP16YKR086W SMC4Q12267 1418 aa1.58□□□□□ -2.16
PRP16YKR086W CYC8P14922 966 aa1.58□□□□□ -2.16
PRP16YKR086W YCR015CP25616 317 aa1.58□□□□□ -2.16
PRP16YKR086W RCM1P53972 490 aa1.58□□□□□ -2.16
PRP16YKR086W RKM2Q03942 479 aa1.58□□□□□ -2.16
PRP16YKR086W EST2Q06163 884 aa1.58□□□□□ -2.16
PRP16YKR086W TRE1Q08919 783 aa1.58□□□□□ -2.16
PRP16YKR086W FYV10P40492 516 aa1.57□□□□□ -2.16
PRP16YKR086W IRC24P40580 263 aa1.57□□□□□ -2.16
PRP16YKR086W GTS1P40956 396 aa1.57□□□□□ -2.16
PRP16YKR086W YGR122WP53272 402 aa1.57□□□□□ -2.16
PRP16YKR086W GDE1Q02979 1223 aa1.57□□□□□ -2.16
PRP16YKR086W YPR196WQ06595 470 aa1.57□□□□□ -2.16
PRP16YKR086W YOR059CQ08448 450 aaKnown RBP1.57□□□□□ -2.16
PRP16YKR086W IQG1Q12280 1495 aa1.57□□□□□ -2.16
PRP16YKR086W RET1P22276 1149 aaKnown RBP1.57□□□□□ -2.16
PRP16YKR086W NNK1P36003 928 aa1.57□□□□□ -2.16
PRP16YKR086W YAR028WP39548 234 aa1.57□□□□□ -2.16
PRP16YKR086W GPB2P39717 880 aa1.57□□□□□ -2.16
PRP16YKR086W YJL045WP47052 634 aa1.57□□□□□ -2.16
PRP16YKR086W SLI1P53304 468 aa1.57□□□□□ -2.16
PRP16YKR086W ALD6P54115 500 aaKnown RBP1.57□□□□□ -2.16
PRP16YKR086W DUS4Q06063 367 aa1.57□□□□□ -2.16
PRP16YKR086W MKK2P32491 506 aa1.57□□□□□ -2.16
PRP16YKR086W FLR1P38124 548 aa1.57□□□□□ -2.16
PRP16YKR086W QNS1P38795 714 aaKnown RBP1.57□□□□□ -2.16
PRP16YKR086W UBP5P39944 805 aa1.57□□□□□ -2.16
PRP16YKR086W ECL1P48235 211 aa1.57□□□□□ -2.16
PRP16YKR086W MTC3P53077 123 aa1.57□□□□□ -2.16
PRP16YKR086W TPO2P53283 614 aa1.57□□□□□ -2.16
PRP16YKR086W RAT1Q02792 1006 aaKnown RBP1.57□□□□□ -2.16
PRP16YKR086W TDA5Q06417 326 aaKnown RBP1.57□□□□□ -2.16
PRP16YKR086W PTC5Q12511 572 aa1.57□□□□□ -2.16
PRP16YKR086W BCK1Q01389 1478 aa1.57□□□□□ -2.16
PRP16YKR086W COQ4O13525 335 aa1.56□□□□□ -2.16
PRP16YKR086W NAP1P25293 417 aaKnown RBP1.56□□□□□ -2.16
PRP16YKR086W SAH1P39954 449 aaKnown RBP1.56□□□□□ -2.16
PRP16YKR086W MPH1P40562 993 aa1.56□□□□□ -2.16
PRP16YKR086W HRK1Q08732 759 aaKnown RBP1.56□□□□□ -2.16
PRP16YKR086W YPL066WQ12194 479 aa1.56□□□□□ -2.16
PRP16YKR086W SPO21Q12411 609 aa1.56□□□□□ -2.16
PRP16YKR086W YLL066CQ99208 1374 aa1.56□□□□□ -2.16
PRP16YKR086W GCR1P07261 785 aa1.56□□□□□ -2.16
PRP16YKR086W RAD2P07276 1031 aa1.56□□□□□ -2.16
PRP16YKR086W ENA1P13587 1091 aa1.56□□□□□ -2.16
PRP16YKR086W DBP2P24783 546 aaKnown RBP1.56□□□□□ -2.16
PRP16YKR086W POL12P38121 705 aaPredicted RBP1.56□□□□□ -2.16
PRP16YKR086W ENA2Q01896 1091 aa1.56□□□□□ -2.16
PRP16YKR086W PLB2Q03674 706 aa1.56□□□□□ -2.16
PRP16YKR086W YLR257WQ06146 321 aaKnown RBP1.56□□□□□ -2.16
PRP16YKR086W ENA5Q12691 1091 aa1.56□□□□□ -2.16
PRP16YKR086W PRO1P32264 428 aa1.55□□□□□ -2.16
PRP16YKR086W SRP40P32583 406 aaPredicted RBP1.55□□□□□ -2.16
PRP16YKR086W YSC84P32793 468 aa1.55□□□□□ -2.16
PRP16YKR086W ADD66P36040 267 aa1.55□□□□□ -2.16
PRP16YKR086W SIW14P53965 281 aa1.55□□□□□ -2.16
PRP16YKR086W EEB1Q02891 456 aa1.55□□□□□ -2.16
PRP16YKR086W NBA1Q08229 501 aaKnown RBP1.55□□□□□ -2.16
PRP16YKR086W MCD1Q12158 566 aa1.55□□□□□ -2.16
PRP16YKR086W OSH2Q12451 1283 aa1.55□□□□□ -2.16
PRP16YKR086W NUP159P40477 1460 aa1.55□□□□□ -2.16
PRP16YKR086W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
PRP16YKR086W PUF4P25339 888 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
PRP16YKR086W UGA2P38067 497 aa1.55□□□□□ -2.16
PRP16YKR086W TIM54P47045 478 aa1.55□□□□□ -2.16
PRP16YKR086W ROD1Q02805 837 aa1.55□□□□□ -2.16
PRP16YKR086W ESC8Q08119 714 aa1.55□□□□□ -2.16
PRP16YKR086W SOD2P00447 233 aa1.55□□□□□ -2.16
PRP16YKR086W KIP1P28742 1111 aa1.55□□□□□ -2.16
PRP16YKR086W AAR2P32357 355 aaPredicted RBP1.55□□□□□ -2.16
PRP16YKR086W YKL151CP36059 337 aa1.55□□□□□ -2.16
PRP16YKR086W PTC7P38797 343 aa1.55□□□□□ -2.16
PRP16YKR086W MRPL22P53881 309 aa1.55□□□□□ -2.16
PRP16YKR086W VPS30Q02948 557 aa1.55□□□□□ -2.16
PRP16YKR086W RSC58Q07979 502 aa1.55□□□□□ -2.16
PRP16YKR086W DRS2P39524 1355 aa1.54□□□□□ -2.16
PRP16YKR086W INO1P11986 533 aa1.54□□□□□ -2.16
PRP16YKR086W GAS1P22146 559 aaKnown RBP1.54□□□□□ -2.16
PRP16YKR086W SRO9P25567 434 aaKnown RBP1.54□□□□□ -2.16
PRP16YKR086W YKL091CP33324 310 aaKnown RBP1.54□□□□□ -2.16
PRP16YKR086W SAP190P36123 1033 aa1.54□□□□□ -2.16
PRP16YKR086W ALG3P38179 458 aa1.54□□□□□ -2.16
PRP16YKR086W YDR306CQ06640 478 aa1.54□□□□□ -2.16
PRP16YKR086W MMS1Q06211 1407 aa1.54□□□□□ -2.16
PRP16YKR086W RPS9AO13516 197 aaKnown RBP1.54□□□□□ -2.16
PRP16YKR086W YER152CP10356 443 aa1.54□□□□□ -2.16
PRP16YKR086W TAF13P11747 167 aa1.54□□□□□ -2.16
PRP16YKR086W PRE10P21242 288 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
PRP16YKR086W ADP1P25371 1049 aa1.54□□□□□ -2.16
PRP16YKR086W ARE1P25628 610 aa1.54□□□□□ -2.16
PRP16YKR086W APL1P27351 700 aa1.54□□□□□ -2.16
PRP16YKR086W PPG1P32838 368 aa1.54□□□□□ -2.16
PRP16YKR086W RER2P35196 286 aa1.54□□□□□ -2.16
PRP16YKR086W SNF7P39929 240 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms