RNA–Protein interactions for RNA: YKL166C

TPK3, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK3, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK3	YKL166C	OMA1	P36163	345 aa		4.6	□□□□□ -1.67
TPK3	YKL166C	HRQ1	Q05549	1077 aa		4.6	□□□□□ -1.67
TPK3	YKL166C	ATG13	Q06628	738 aa		4.6	□□□□□ -1.67
TPK3	YKL166C	OSH2	Q12451	1283 aa		4.6	□□□□□ -1.67
TPK3	YKL166C	BI4	P03879	638 aa		4.59	□□□□□ -1.67
TPK3	YKL166C	THS1	P04801	734 aa	Known RBP	4.59	□□□□□ -1.67
TPK3	YKL166C	MTC3	P53077	123 aa		4.59	□□□□□ -1.67
TPK3	YKL166C	ERP6	P53198	216 aa		4.59	□□□□□ -1.67
TPK3	YKL166C	EAF1	Q06337	982 aa		4.59	□□□□□ -1.67
TPK3	YKL166C	FLC1	Q08967	793 aa		4.59	□□□□□ -1.67
TPK3	YKL166C	SPS1	P08458	490 aa		4.58	□□□□□ -1.68
TPK3	YKL166C	HSP60	P19882	572 aa	Known RBP	4.58	□□□□□ -1.68
TPK3	YKL166C	ACE2	P21192	770 aa		4.58	□□□□□ -1.68
TPK3	YKL166C	CDC12	P32468	407 aa	Known RBP	4.58	□□□□□ -1.68
TPK3	YKL166C	HBS1	P32769	611 aa	Known RBP	4.58	□□□□□ -1.68
TPK3	YKL166C	LIP5	P32875	414 aa		4.58	□□□□□ -1.68
TPK3	YKL166C	YKL091C	P33324	310 aa	Known RBP	4.58	□□□□□ -1.68
TPK3	YKL166C	HSP78	P33416	811 aa		4.58	□□□□□ -1.68
TPK3	YKL166C	ABZ1	P37254	787 aa	Predicted RBP	4.58	□□□□□ -1.68
TPK3	YKL166C	SEC26	P41810	973 aa	Known RBP	4.58	□□□□□ -1.68
TPK3	YKL166C	ALR2	P43553	858 aa		4.58	□□□□□ -1.68
TPK3	YKL166C	YGR125W	P53273	1036 aa		4.58	□□□□□ -1.68
TPK3	YKL166C	RPN4	Q03465	531 aa		4.58	□□□□□ -1.68
TPK3	YKL166C	DUS3	Q06053	668 aa	Known RBP	4.58	□□□□□ -1.68
TPK3	YKL166C	YDR306C	Q06640	478 aa		4.58	□□□□□ -1.68
TPK3	YKL166C	UBX5	Q06682	500 aa		4.58	□□□□□ -1.68
TPK3	YKL166C	YLL058W	Q12198	575 aa		4.58	□□□□□ -1.68
TPK3	YKL166C	CIT1	P00890	479 aa		4.57	□□□□□ -1.68
TPK3	YKL166C	ARE1	P25628	610 aa		4.57	□□□□□ -1.68
TPK3	YKL166C	RSP5	P39940	809 aa	Known RBP	4.57	□□□□□ -1.68
TPK3	YKL166C	RRT14	P40470	206 aa		4.57	□□□□□ -1.68
TPK3	YKL166C	BUD6	P41697	788 aa		4.57	□□□□□ -1.68
TPK3	YKL166C	SRP1	Q02821	542 aa	Known RBP	4.57	□□□□□ -1.68
TPK3	YKL166C	FPR4	Q06205	392 aa	Predicted RBP	4.57	□□□□□ -1.68
TPK3	YKL166C	MDM38	Q08179	573 aa		4.57	□□□□□ -1.68
TPK3	YKL166C	PPM2	Q08282	695 aa		4.57	□□□□□ -1.68
TPK3	YKL166C	SVS1	Q12254	260 aa		4.57	□□□□□ -1.68
TPK3	YKL166C	YOR131C	Q12486	218 aa		4.57	□□□□□ -1.68
TPK3	YKL166C	SAH1	P39954	449 aa	Known RBP	4.56	□□□□□ -1.68
TPK3	YKL166C	SIT1	P39980	628 aa		4.56	□□□□□ -1.68
TPK3	YKL166C	AAR2	P32357	355 aa	Predicted RBP	4.55	□□□□□ -1.68
TPK3	YKL166C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
TPK3	YKL166C	RFC5	P38251	354 aa		4.55	□□□□□ -1.68
TPK3	YKL166C	CCC2	P38995	1004 aa		4.55	□□□□□ -1.68
TPK3	YKL166C	FOL2	P51601	243 aa	Known RBP	4.55	□□□□□ -1.68
TPK3	YKL166C	ENV11	P53246	860 aa		4.55	□□□□□ -1.68
TPK3	YKL166C	TPO2	P53283	614 aa		4.55	□□□□□ -1.68
TPK3	YKL166C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
TPK3	YKL166C	TAF8	Q03750	510 aa		4.55	□□□□□ -1.68
TPK3	YKL166C	CAN1	P04817	590 aa		4.54	□□□□□ -1.68
TPK3	YKL166C	CIT2	P08679	460 aa		4.54	□□□□□ -1.68
TPK3	YKL166C	PPH3	P32345	308 aa		4.54	□□□□□ -1.68
TPK3	YKL166C	AFR1	P33304	620 aa		4.54	□□□□□ -1.68
TPK3	YKL166C	MAC1	P35192	417 aa		4.54	□□□□□ -1.68
TPK3	YKL166C	GIC1	P38785	314 aa		4.54	□□□□□ -1.68
TPK3	YKL166C	GGA2	P38817	585 aa	Known RBP	4.54	□□□□□ -1.68
TPK3	YKL166C	NPP2	P39997	493 aa		4.54	□□□□□ -1.68
TPK3	YKL166C	HUL4	P40985	892 aa		4.54	□□□□□ -1.68
TPK3	YKL166C	HFM1	P51979	1187 aa		4.54	□□□□□ -1.68
TPK3	YKL166C	SRT1	Q03175	343 aa		4.54	□□□□□ -1.68
TPK3	YKL166C	RIB2	Q12362	591 aa	Known RBP	4.54	□□□□□ -1.68
TPK3	YKL166C	HBN1	Q96VH4	193 aa		4.54	□□□□□ -1.68
TPK3	YKL166C	ADE8	P04161	214 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	GAL11	P19659	1081 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	NPP1	P25353	742 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	FUN30	P31380	1131 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	CDC11	P32458	415 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	YRO2	P38079	344 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	POL12	P38121	705 aa	Predicted RBP	4.53	□□□□□ -1.68
TPK3	YKL166C	CHZ1	P40019	153 aa	Predicted RBP	4.53	□□□□□ -1.68
TPK3	YKL166C	GYP7	P48365	746 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	RTA1	P53047	317 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
TPK3	YKL166C	BUL2	Q03758	920 aa	Known RBP	4.53	□□□□□ -1.68
TPK3	YKL166C	RSM24	Q03976	319 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	XYL2	Q07993	356 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	YDL177C	Q12257	170 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	DFG16	Q99234	619 aa		4.53	□□□□□ -1.68
TPK3	YKL166C	TOP3	P13099	656 aa		4.52	□□□□□ -1.69
TPK3	YKL166C	APL1	P27351	700 aa		4.52	□□□□□ -1.69
TPK3	YKL166C	SCT1	P32784	759 aa		4.52	□□□□□ -1.69
TPK3	YKL166C	LRG1	P35688	1017 aa		4.52	□□□□□ -1.69
TPK3	YKL166C	BET3	P36149	193 aa		4.52	□□□□□ -1.69
TPK3	YKL166C	YBR284W	P38150	797 aa		4.52	□□□□□ -1.69
TPK3	YKL166C	TSL1	P38427	1098 aa	Known RBP	4.52	□□□□□ -1.69
TPK3	YKL166C	ETP1	P38748	585 aa	Known RBP	4.52	□□□□□ -1.69
TPK3	YKL166C	SIZ1	Q04195	904 aa		4.52	□□□□□ -1.69
TPK3	YKL166C	YDL124W	Q07551	312 aa	Known RBP	4.52	□□□□□ -1.69
TPK3	YKL166C	OSW2	Q12202	724 aa		4.52	□□□□□ -1.69
TPK3	YKL166C	KIN2	P13186	1147 aa	Known RBP	4.51	□□□□□ -1.69
TPK3	YKL166C	SRM1	P21827	482 aa		4.51	□□□□□ -1.69
TPK3	YKL166C	TIM23	P32897	222 aa		4.51	□□□□□ -1.69
TPK3	YKL166C	PET10	P36139	283 aa		4.51	□□□□□ -1.69
TPK3	YKL166C	YKR078W	P36158	585 aa	Known RBP	4.51	□□□□□ -1.69
TPK3	YKL166C	YAP1801	P38856	637 aa		4.51	□□□□□ -1.69
TPK3	YKL166C	ECL1	P48235	211 aa		4.51	□□□□□ -1.69
TPK3	YKL166C	MSC2	Q03455	724 aa		4.51	□□□□□ -1.69
TPK3	YKL166C	LCD1	Q04377	747 aa		4.51	□□□□□ -1.69
TPK3	YKL166C	YPR071W	Q12346	211 aa		4.51	□□□□□ -1.69
TPK3	YKL166C	CYC1	P00044	109 aa	Predicted RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms