RNA–Protein interactions for RNA: YKL038W

RGT1, Transcript of Glucose-responsive transcription factor, yeast

Gene RGT1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RGT1	YKL038W	YEL043W	P32618	956 aa		5.75	□□□□□ -1.49
RGT1	YKL038W	NFU1	P32860	256 aa		5.75	□□□□□ -1.49
RGT1	YKL038W	HAM1	P47119	197 aa	Known RBP	5.75	□□□□□ -1.49
RGT1	YKL038W	FMP30	Q02883	468 aa		5.75	□□□□□ -1.49
RGT1	YKL038W	HCR1	Q05775	265 aa	Known RBP	5.75	□□□□□ -1.49
RGT1	YKL038W	YLR287C	Q05881	355 aa		5.75	□□□□□ -1.49
RGT1	YKL038W	SMC1	P32908	1225 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	FES1	P38260	290 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	AMN1	P38285	549 aa	Predicted RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	CCT2	P39076	527 aa	Known RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	SGM1	P47166	707 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	MAL13	P53338	473 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	CWC15	Q03772	175 aa	Known RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	SPC24	Q04477	213 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	RRP6	Q12149	733 aa	Known RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	GPR1	Q12361	961 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	RPL24A	P04449	155 aa	Known RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	RSR1	P13856	272 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	PWP1	P21304	576 aa	Known RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	KDX1	P36005	433 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	YBR062C	P38239	180 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	ARI1	P53111	347 aa	Known RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	FUS2	Q05670	677 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	KGD2	P19262	463 aa	Predicted RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	KTR1	P27810	393 aa	Known RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	IMD4	P50094	524 aa	Known RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	MSN5	P52918	1224 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	YNR029C	P53729	429 aa	Known RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	HFD1	Q04458	532 aa		5.74	□□□□□ -1.49
RGT1	YKL038W	BRE1	Q07457	700 aa	Known RBP	5.74	□□□□□ -1.49
RGT1	YKL038W	MSS116	P15424	664 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	THR1	P17423	357 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	SLA2	P33338	968 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	SAK1	P38990	1142 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	SPC72	P39723	622 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	PDS1	P40316	373 aa	Predicted RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	BOP3	P53958	396 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	RAT1	Q02792	1006 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	OSW1	Q08692	278 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	AFT2	Q08957	416 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	RPO41	P13433	1351 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	FKS3	Q04952	1785 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	ENO1	P00924	437 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	MTF2	P10849	440 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	SWD1	P39706	426 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	MET18	P40469	1032 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	SXM1	Q04175	944 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	YML082W	Q04533	649 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	MCP2	Q06567	569 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	MSH5	Q12175	901 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	RUP1	Q12242	671 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	PGA3	Q12746	312 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	TPM1	P17536	199 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	SQT1	P35184	431 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	NOP15	P53927	220 aa	Predicted RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	REX2	P54964	269 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	PPM1	Q04081	328 aa		5.73	□□□□□ -1.49
RGT1	YKL038W	ABP140	Q08641	628 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	HTZ1	Q12692	134 aa	Known RBP	5.73	□□□□□ -1.49
RGT1	YKL038W	SSC1	P0CS90	654 aa	Known RBP	5.72	□□□□□ -1.49
RGT1	YKL038W	CDC10	P25342	322 aa	Known RBP	5.72	□□□□□ -1.49
RGT1	YKL038W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	RIP-Chip
RGT1	YKL038W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
RGT1	YKL038W	FYV8	P46949	817 aa	Known RBP	5.72	□□□□□ -1.49
RGT1	YKL038W	ECL1	P48235	211 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	HOS2	P53096	452 aa	Predicted RBP	5.72	□□□□□ -1.49
RGT1	YKL038W	CIK1	Q01649	594 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	NOG1	Q02892	647 aa	Known RBP	5.72	□□□□□ -1.49
RGT1	YKL038W	ELG1	Q12050	791 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	BBP1	Q12365	385 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	URB1	P34241	1764 aa	Known RBP	5.72	□□□□□ -1.49
RGT1	YKL038W	CDC16	P09798	840 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	RGP1	P16664	663 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	SCJ1	P25303	377 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	ADY2	P25613	283 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	POL4	P25615	582 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	MVD1	P32377	396 aa	Known RBP	5.72	□□□□□ -1.49
RGT1	YKL038W	OAF3	P36023	863 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	YHR020W	P38708	688 aa	Known RBP	5.72	□□□□□ -1.49
RGT1	YKL038W	YEL023C	P39992	682 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	FAR7	P43592	221 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	SRB7	P47822	140 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	YPT11	P48559	417 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	GDE1	Q02979	1223 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	SRT1	Q03175	343 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	RPN8	Q08723	338 aa	Known RBP	5.72	□□□□□ -1.49
RGT1	YKL038W	RIM20	Q12033	661 aa		5.72	□□□□□ -1.49
RGT1	YKL038W	RPS6A	P0CX37	236 aa	Known RBP	5.71	□□□□□ -1.49
RGT1	YKL038W	RPS6B	P0CX38	236 aa	Predicted RBP	5.71	□□□□□ -1.49
RGT1	YKL038W	PET122	P10355	254 aa		5.71	□□□□□ -1.49
RGT1	YKL038W	PRP22	P24384	1145 aa	Known RBP	5.71	□□□□□ -1.49
RGT1	YKL038W	APL1	P27351	700 aa		5.71	□□□□□ -1.49
RGT1	YKL038W	HOP2	P53187	214 aa		5.71	□□□□□ -1.49
RGT1	YKL038W	SQS1	P53866	767 aa	Known RBP	5.71	□□□□□ -1.49
RGT1	YKL038W	SSQ1	Q05931	657 aa	Predicted RBP	5.71	□□□□□ -1.49
RGT1	YKL038W	NSE1	Q07913	336 aa		5.71	□□□□□ -1.49
RGT1	YKL038W	YBL113C	Q7M4S9	792 aa		5.71	□□□□□ -1.49
RGT1	YKL038W	YML133C	Q03099	1374 aa		5.71	□□□□□ -1.5
RGT1	YKL038W	YLL067C	Q07888	1374 aa		5.71	□□□□□ -1.5
RGT1	YKL038W	YLL066C	Q99208	1374 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms