RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C ADY3Q07732 790 aa2.87□□□□□ -1.95
VPS55YJR044C AIM39Q08223 395 aa2.87□□□□□ -1.95
VPS55YJR044C ENA5Q12691 1091 aa2.87□□□□□ -1.95
VPS55YJR044C TAF13P11747 167 aa2.86□□□□□ -1.95
VPS55YJR044C DBP5P20449 482 aaKnown RBP2.86□□□□□ -1.95
VPS55YJR044C PRE9P23638 258 aaKnown RBP2.86□□□□□ -1.95
VPS55YJR044C SEC8P32855 1065 aa2.86□□□□□ -1.95
VPS55YJR044C ZRG8P40021 1076 aa2.86□□□□□ -1.95
VPS55YJR044C CNN1P43618 361 aa2.86□□□□□ -1.95
VPS55YJR044C MET12P46151 657 aa2.86□□□□□ -1.95
VPS55YJR044C GNP1P48813 663 aa2.86□□□□□ -1.95
VPS55YJR044C MRL1Q06815 381 aa2.86□□□□□ -1.95
VPS55YJR044C KCS1Q12494 1050 aa2.86□□□□□ -1.95
VPS55YJR044C HIS5P07172 385 aa2.85□□□□□ -1.95
VPS55YJR044C RPL11AP0C0W9 174 aaKnown RBP2.85□□□□□ -1.95
VPS55YJR044C DBP2P24783 546 aaKnown RBP2.85□□□□□ -1.95
VPS55YJR044C ATF1P40353 525 aa2.85□□□□□ -1.95
VPS55YJR044C MPH1P40562 993 aa2.85□□□□□ -1.95
VPS55YJR044C MRPS18P42847 217 aa2.85□□□□□ -1.95
VPS55YJR044C LAS17Q12446 633 aa2.85□□□□□ -1.95
VPS55YJR044C RPL11BQ3E757 174 aaPredicted RBP2.85□□□□□ -1.95
VPS55YJR044C MCM7P38132 845 aa2.84□□□□□ -1.95
VPS55YJR044C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95 RIP-Chip
VPS55YJR044C MSC6Q08818 692 aaKnown RBP2.84□□□□□ -1.95
VPS55YJR044C GCR1P07261 785 aa2.83□□□□□ -1.96
VPS55YJR044C SLA2P33338 968 aa2.83□□□□□ -1.96
VPS55YJR044C IOC3P43596 787 aa2.83□□□□□ -1.96
VPS55YJR044C CHA4P43634 648 aa2.83□□□□□ -1.96
VPS55YJR044C YGR122WP53272 402 aa2.83□□□□□ -1.96
VPS55YJR044C YLR040CQ07988 224 aa2.83□□□□□ -1.96
VPS55YJR044C MCD1Q12158 566 aa2.83□□□□□ -1.96
VPS55YJR044C RAD2P07276 1031 aa2.82□□□□□ -1.96
VPS55YJR044C SUL1P38359 859 aa2.82□□□□□ -1.96
VPS55YJR044C SSF1P38789 453 aaPredicted RBP2.82□□□□□ -1.96
VPS55YJR044C RPS26AP39938 119 aaKnown RBP2.82□□□□□ -1.96
VPS55YJR044C RPS26BP39939 119 aaKnown RBP2.82□□□□□ -1.96
VPS55YJR044C RRT14P40470 206 aa2.82□□□□□ -1.96
VPS55YJR044C BUL1P48524 976 aa2.82□□□□□ -1.96
VPS55YJR044C YMR206WQ03695 313 aa2.82□□□□□ -1.96
VPS55YJR044C TIF35Q04067 274 aaKnown RBP2.82□□□□□ -1.96
VPS55YJR044C TMN2Q04562 672 aa2.82□□□□□ -1.96
VPS55YJR044C TAF7Q05021 590 aa2.82□□□□□ -1.96
VPS55YJR044C BDF2Q07442 638 aa2.82□□□□□ -1.96
VPS55YJR044C YOL073CQ08232 322 aa2.82□□□□□ -1.96
VPS55YJR044C ACM1Q08981 209 aa2.82□□□□□ -1.96
VPS55YJR044C EFT1P32324 842 aaKnown RBP2.81□□□□□ -1.96
VPS55YJR044C SRP101P32916 621 aa2.81□□□□□ -1.96
VPS55YJR044C ENT3P47160 408 aa2.81□□□□□ -1.96
VPS55YJR044C MTC3P53077 123 aa2.81□□□□□ -1.96
VPS55YJR044C NPC2Q12408 173 aa2.81□□□□□ -1.96
VPS55YJR044C CYC8P14922 966 aa2.8□□□□□ -1.96
VPS55YJR044C MCM2P29469 868 aa2.8□□□□□ -1.96
VPS55YJR044C RER2P35196 286 aa2.8□□□□□ -1.96
VPS55YJR044C SNM1P40993 198 aa2.8□□□□□ -1.96
VPS55YJR044C QRI1P43123 477 aaKnown RBP2.8□□□□□ -1.96
VPS55YJR044C STB4P50104 949 aa2.8□□□□□ -1.96
VPS55YJR044C WHI4Q07655 649 aaKnown RBP2.8□□□□□ -1.96
VPS55YJR044C GNT1Q12096 491 aa2.8□□□□□ -1.96
VPS55YJR044C SPE1P08432 466 aa2.79□□□□□ -1.96
VPS55YJR044C KAR4P25583 335 aa2.79□□□□□ -1.96
VPS55YJR044C YAP1801P38856 637 aa2.79□□□□□ -1.96
VPS55YJR044C STM1P39015 273 aaKnown RBP2.79□□□□□ -1.96
VPS55YJR044C GEM1P39722 662 aa2.79□□□□□ -1.96
VPS55YJR044C YGR012WP53206 393 aa2.79□□□□□ -1.96
VPS55YJR044C SPP382Q06411 708 aaPredicted RBP2.79□□□□□ -1.96
VPS55YJR044C CDA1Q06702 301 aa2.79□□□□□ -1.96
VPS55YJR044C MCH5Q08777 521 aa2.79□□□□□ -1.96
VPS55YJR044C CAD1P24813 409 aaKnown RBP2.78□□□□□ -1.96
VPS55YJR044C CUE2P36075 443 aaKnown RBP2.78□□□□□ -1.96
VPS55YJR044C PNT1P38969 423 aa2.78□□□□□ -1.96
VPS55YJR044C IPL1P38991 367 aa2.78□□□□□ -1.96
VPS55YJR044C STU2P46675 888 aa2.78□□□□□ -1.96
VPS55YJR044C NCS6P53088 359 aa2.78□□□□□ -1.96
VPS55YJR044C MUK1Q02866 612 aa2.78□□□□□ -1.96
VPS55YJR044C OSW2Q12202 724 aa2.78□□□□□ -1.96
VPS55YJR044C PEX2P32800 271 aa2.77□□□□□ -1.97
VPS55YJR044C MOT2P34909 587 aaKnown RBP2.77□□□□□ -1.97
VPS55YJR044C IRC10Q08118 586 aa2.77□□□□□ -1.97
VPS55YJR044C ENB1Q08299 606 aa2.77□□□□□ -1.97
VPS55YJR044C TRM13Q12383 476 aa2.77□□□□□ -1.97
VPS55YJR044C ERG4P25340 473 aa2.76□□□□□ -1.97
VPS55YJR044C YKL151CP36059 337 aa2.76□□□□□ -1.97
VPS55YJR044C YPL066WQ12194 479 aa2.76□□□□□ -1.97
VPS55YJR044C THS1P04801 734 aaKnown RBP2.75□□□□□ -1.97
VPS55YJR044C MTH1P35198 433 aa2.75□□□□□ -1.97
VPS55YJR044C CCC2P38995 1004 aa2.75□□□□□ -1.97
VPS55YJR044C GND2P53319 492 aa2.75□□□□□ -1.97
VPS55YJR044C SPR28Q04921 423 aa2.75□□□□□ -1.97
VPS55YJR044C HRQ1Q05549 1077 aa2.75□□□□□ -1.97
VPS55YJR044C RPP2AP05319 106 aaKnown RBP2.74□□□□□ -1.97
VPS55YJR044C ECM21P38167 1117 aaKnown RBP2.74□□□□□ -1.97
VPS55YJR044C GIC1P38785 314 aa2.74□□□□□ -1.97
VPS55YJR044C PSP2P50109 593 aaKnown RBP2.74□□□□□ -1.97
VPS55YJR044C OMS1Q06668 471 aa2.74□□□□□ -1.97
VPS55YJR044C MDM38Q08179 573 aa2.74□□□□□ -1.97
VPS55YJR044C ACF2Q12168 779 aa2.74□□□□□ -1.97
VPS55YJR044C HSF1P10961 833 aa2.73□□□□□ -1.97
VPS55YJR044C INO1P11986 533 aa2.73□□□□□ -1.97
VPS55YJR044C RAD27P26793 382 aa2.73□□□□□ -1.97
VPS55YJR044C SPC42P36094 363 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms