RNA–Protein interactions for RNA: YHR148W

IMP3, Transcript of Component of the SSU processome, yeastyeast

Gene IMP3, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IMP3YHR148W CIT1P00890 479 aa6.22□□□□□ -1.41
IMP3YHR148W HBS1P32769 611 aaKnown RBP6.22□□□□□ -1.41
IMP3YHR148W OMA1P36163 345 aa6.22□□□□□ -1.41
IMP3YHR148W ABZ1P37254 787 aaPredicted RBP6.22□□□□□ -1.41
IMP3YHR148W INP52P50942 1183 aa6.22□□□□□ -1.41
IMP3YHR148W ERP6P53198 216 aa6.22□□□□□ -1.41
IMP3YHR148W YGR125WP53273 1036 aa6.22□□□□□ -1.41
IMP3YHR148W DUS3Q06053 668 aaKnown RBP6.22□□□□□ -1.41
IMP3YHR148W EAF1Q06337 982 aa6.22□□□□□ -1.41
IMP3YHR148W YDR306CQ06640 478 aa6.22□□□□□ -1.41
IMP3YHR148W NBA1Q08229 501 aaKnown RBP6.22□□□□□ -1.41
IMP3YHR148W PPM2Q08282 695 aa6.22□□□□□ -1.41
IMP3YHR148W RSB1Q08417 382 aa6.22□□□□□ -1.41
IMP3YHR148W FLC1Q08967 793 aa6.22□□□□□ -1.41
IMP3YHR148W OSH2Q12451 1283 aa6.22□□□□□ -1.41
IMP3YHR148W PRP9P19736 530 aaKnown RBP6.21□□□□□ -1.42
IMP3YHR148W ARE1P25628 610 aa6.21□□□□□ -1.42
IMP3YHR148W CDC12P32468 407 aaKnown RBP6.21□□□□□ -1.42
IMP3YHR148W PBP2P38151 413 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
IMP3YHR148W MTC3P53077 123 aa6.21□□□□□ -1.42
IMP3YHR148W RPN4Q03465 531 aa6.21□□□□□ -1.42
IMP3YHR148W HSP60P19882 572 aaKnown RBP6.2□□□□□ -1.42
IMP3YHR148W LIP5P32875 414 aa6.2□□□□□ -1.42
IMP3YHR148W HSP78P33416 811 aa6.2□□□□□ -1.42
IMP3YHR148W RSP5P39940 809 aaKnown RBP6.2□□□□□ -1.42
IMP3YHR148W BUD6P41697 788 aa6.2□□□□□ -1.42
IMP3YHR148W ATG13Q06628 738 aa6.2□□□□□ -1.42
IMP3YHR148W SAH1P39954 449 aaKnown RBP6.19□□□□□ -1.42
IMP3YHR148W ORC3P54790 616 aa6.19□□□□□ -1.42
IMP3YHR148W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
IMP3YHR148W THS1P04801 734 aaKnown RBP6.18□□□□□ -1.42
IMP3YHR148W SPS1P08458 490 aa6.18□□□□□ -1.42
IMP3YHR148W CIT2P08679 460 aa6.18□□□□□ -1.42
IMP3YHR148W ACE2P21192 770 aa6.18□□□□□ -1.42
IMP3YHR148W AFR1P33304 620 aa6.18□□□□□ -1.42
IMP3YHR148W NPP2P39997 493 aa6.18□□□□□ -1.42
IMP3YHR148W SEC26P41810 973 aaKnown RBP6.18□□□□□ -1.42
IMP3YHR148W HFM1P51979 1187 aa6.18□□□□□ -1.42
IMP3YHR148W TAF8Q03750 510 aa6.18□□□□□ -1.42
IMP3YHR148W SVS1Q12254 260 aa6.18□□□□□ -1.42
IMP3YHR148W YOR131CQ12486 218 aa6.18□□□□□ -1.42
IMP3YHR148W AAR2P32357 355 aaPredicted RBP6.17□□□□□ -1.42
IMP3YHR148W ERT1P38140 529 aa6.17□□□□□ -1.42
IMP3YHR148W CCC2P38995 1004 aa6.17□□□□□ -1.42
IMP3YHR148W RTA1P53047 317 aa6.17□□□□□ -1.42
IMP3YHR148W NRD1P53617 575 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42 RIP-Chip
IMP3YHR148W FPR4Q06205 392 aaPredicted RBP6.17□□□□□ -1.42
IMP3YHR148W MDM38Q08179 573 aa6.17□□□□□ -1.42
IMP3YHR148W RIB2Q12362 591 aaKnown RBP6.17□□□□□ -1.42
IMP3YHR148W HBN1Q96VH4 193 aa6.17□□□□□ -1.42
IMP3YHR148W NPP1P25353 742 aa6.16□□□□□ -1.42
IMP3YHR148W PPH3P32345 308 aa6.16□□□□□ -1.42
IMP3YHR148W BET3P36149 193 aa6.16□□□□□ -1.42
IMP3YHR148W YBR284WP38150 797 aa6.16□□□□□ -1.42
IMP3YHR148W GIC1P38785 314 aa6.16□□□□□ -1.42
IMP3YHR148W RRT14P40470 206 aa6.16□□□□□ -1.42
IMP3YHR148W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
IMP3YHR148W SRP1Q02821 542 aaKnown RBP6.16□□□□□ -1.42
IMP3YHR148W YLL058WQ12198 575 aa6.16□□□□□ -1.42
IMP3YHR148W CAN1P04817 590 aa6.15□□□□□ -1.42
IMP3YHR148W TOP3P13099 656 aa6.15□□□□□ -1.42
IMP3YHR148W GAL11P19659 1081 aa6.15□□□□□ -1.42
IMP3YHR148W TIM23P32897 222 aa6.15□□□□□ -1.42
IMP3YHR148W RFC5P38251 354 aa6.15□□□□□ -1.42
IMP3YHR148W SIT1P39980 628 aa6.15□□□□□ -1.42
IMP3YHR148W XYL2Q07993 356 aa6.15□□□□□ -1.42
IMP3YHR148W YDL177CQ12257 170 aa6.15□□□□□ -1.42
IMP3YHR148W ERR1P0CX10 437 aa6.14□□□□□ -1.43
IMP3YHR148W ERR2P0CX11 437 aa6.14□□□□□ -1.43
IMP3YHR148W MAC1P35192 417 aa6.14□□□□□ -1.43
IMP3YHR148W YRO2P38079 344 aa6.14□□□□□ -1.43
IMP3YHR148W SRT1Q03175 343 aa6.14□□□□□ -1.43
IMP3YHR148W BUL2Q03758 920 aaKnown RBP6.14□□□□□ -1.43
IMP3YHR148W YPR071WQ12346 211 aa6.14□□□□□ -1.43
IMP3YHR148W MSD1P15179 658 aaKnown RBP6.13□□□□□ -1.43
IMP3YHR148W LRG1P35688 1017 aa6.13□□□□□ -1.43
IMP3YHR148W POL12P38121 705 aaPredicted RBP6.13□□□□□ -1.43
IMP3YHR148W ETP1P38748 585 aaKnown RBP6.13□□□□□ -1.43
IMP3YHR148W GGA2P38817 585 aaKnown RBP6.13□□□□□ -1.43
IMP3YHR148W HUL4P40985 892 aa6.13□□□□□ -1.43
IMP3YHR148W TPO2P53283 614 aa6.13□□□□□ -1.43
IMP3YHR148W ADE8P04161 214 aa6.12□□□□□ -1.43
IMP3YHR148W APL1P27351 700 aa6.12□□□□□ -1.43
IMP3YHR148W FUN30P31380 1131 aa6.12□□□□□ -1.43
IMP3YHR148W CDC11P32458 415 aa6.12□□□□□ -1.43
IMP3YHR148W TSL1P38427 1098 aaKnown RBP6.12□□□□□ -1.43
IMP3YHR148W NUP82P40368 713 aa6.12□□□□□ -1.43
IMP3YHR148W FOL2P51601 243 aaKnown RBP6.12□□□□□ -1.43
IMP3YHR148W SFB2P53953 876 aa6.12□□□□□ -1.43
IMP3YHR148W YDL124WQ07551 312 aaKnown RBP6.12□□□□□ -1.43
IMP3YHR148W DFG16Q99234 619 aa6.12□□□□□ -1.43
IMP3YHR148W SRM1P21827 482 aa6.11□□□□□ -1.43
IMP3YHR148W PET10P36139 283 aa6.11□□□□□ -1.43
IMP3YHR148W YAP1801P38856 637 aa6.11□□□□□ -1.43
IMP3YHR148W CHZ1P40019 153 aaPredicted RBP6.11□□□□□ -1.43
IMP3YHR148W TOK1P40310 691 aa6.11□□□□□ -1.43
IMP3YHR148W GYP7P48365 746 aa6.11□□□□□ -1.43
IMP3YHR148W RSM24Q03976 319 aa6.11□□□□□ -1.43
IMP3YHR148W YER158CP40095 573 aa6.1□□□□□ -1.43
IMP3YHR148W RNH70P53331 553 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms