RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTM1	YHR109W	GCV1	P48015	400 aa		4.64	□□□□□ -1.67
CTM1	YHR109W	ADE8	P04161	214 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	TRX2	P22803	104 aa	Known RBP	4.63	□□□□□ -1.67
CTM1	YHR109W	NPP1	P25353	742 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	KIP1	P28742	1111 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	AFR1	P33304	620 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	QNS1	P38795	714 aa	Known RBP	4.63	□□□□□ -1.67
CTM1	YHR109W	POL5	P39985	1022 aa	Known RBP	4.63	□□□□□ -1.67
CTM1	YHR109W	MGS1	P40151	587 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	TOK1	P40310	691 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	ROG3	P43602	733 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	PEX14	P53112	341 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	TGL2	P54857	326 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	MTQ2	Q03920	221 aa	Predicted RBP	4.63	□□□□□ -1.67
CTM1	YHR109W	SPO21	Q12411	609 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	RET1	P22276	1149 aa	Known RBP	4.63	□□□□□ -1.67
CTM1	YHR109W	PCL2	P25693	308 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	TFC4	P33339	1025 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	SPC29	P33419	253 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	SIT1	P39980	628 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	YFL054C	P43549	646 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	GYP8	P43570	497 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	TY1A-MR1	Q04215	440 aa		4.63	□□□□□ -1.67
CTM1	YHR109W	YEF3	P16521	1044 aa	Known RBP	4.62	□□□□□ -1.67
CTM1	YHR109W	SFL1	P20134	766 aa		4.62	□□□□□ -1.67
CTM1	YHR109W	YBR238C	P38330	731 aa	Known RBP	4.62	□□□□□ -1.67
CTM1	YHR109W	VPS53	P47061	822 aa		4.62	□□□□□ -1.67
CTM1	YHR109W	YNL034W	P53963	612 aa		4.62	□□□□□ -1.67
CTM1	YHR109W	YNL018C	P53976	612 aa		4.62	□□□□□ -1.67
CTM1	YHR109W	BUL2	Q03758	920 aa	Known RBP	4.62	□□□□□ -1.67
CTM1	YHR109W	LCD1	Q04377	747 aa		4.62	□□□□□ -1.67
CTM1	YHR109W	HFD1	Q04458	532 aa		4.62	□□□□□ -1.67
CTM1	YHR109W	PLC1	P32383	869 aa		4.61	□□□□□ -1.67
CTM1	YHR109W	PRP19	P32523	503 aa	Known RBP	4.61	□□□□□ -1.67
CTM1	YHR109W	LEM3	P42838	414 aa		4.61	□□□□□ -1.67
CTM1	YHR109W	TY4A-J	P47023	414 aa		4.61	□□□□□ -1.67
CTM1	YHR109W	YJR096W	P47137	282 aa		4.61	□□□□□ -1.67
CTM1	YHR109W	AIM14	P53109	570 aa		4.61	□□□□□ -1.67
CTM1	YHR109W	RSA3	Q05942	220 aa	Known RBP	4.61	□□□□□ -1.67
CTM1	YHR109W	TRE2	Q08693	809 aa		4.61	□□□□□ -1.67
CTM1	YHR109W	ELG1	Q12050	791 aa		4.61	□□□□□ -1.67
CTM1	YHR109W	NAR1	P23503	491 aa	Known RBP	4.6	□□□□□ -1.67
CTM1	YHR109W	PWP2	P25635	923 aa	Known RBP	4.6	□□□□□ -1.67
CTM1	YHR109W	YKL151C	P36059	337 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	VPS24	P36095	224 aa	Known RBP	4.6	□□□□□ -1.67
CTM1	YHR109W	HRQ1	Q05549	1077 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	SYT1	Q06836	1226 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	YPL260W	Q08977	551 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	YDR461C-A	Q2V2P7	80 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	THS1	P04801	734 aa	Known RBP	4.6	□□□□□ -1.67
CTM1	YHR109W	PER1	P25625	357 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	CDC12	P32468	407 aa	Known RBP	4.6	□□□□□ -1.67
CTM1	YHR109W	REC104	P33323	182 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	MTC2	P34246	357 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	HSE1	P38753	452 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	CEM1	P39525	442 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	LYS5	P50113	272 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	KIP3	P53086	805 aa	Known RBP	4.6	□□□□□ -1.67
CTM1	YHR109W	YGR283C	P53336	341 aa	Predicted RBP	4.6	□□□□□ -1.67
CTM1	YHR109W	SRP1	Q02821	542 aa	Known RBP	4.6	□□□□□ -1.67
CTM1	YHR109W	GIS4	Q04233	774 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	YLR257W	Q06146	321 aa	Known RBP	4.6	□□□□□ -1.67
CTM1	YHR109W	RSC3	Q06639	885 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	YDL121C	Q07541	149 aa		4.6	□□□□□ -1.67
CTM1	YHR109W	PIF1	P07271	859 aa		4.59	□□□□□ -1.67
CTM1	YHR109W	PRO1	P32264	428 aa		4.59	□□□□□ -1.67
CTM1	YHR109W	TY4B-P	A0A0B7P3V8	1104 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	SAC7	P17121	654 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	DAL3	P32459	195 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	PGM2	P37012	569 aa	Known RBP	4.58	□□□□□ -1.68
CTM1	YHR109W	PEA2	P40091	420 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	BRE2	P43132	505 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	ATG16	Q03818	150 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	DOT1	Q04089	582 aa	Known RBP	4.58	□□□□□ -1.68
CTM1	YHR109W	GUD1	Q07729	489 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	TY4A-H	Q6Q5P6	413 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	SST2	P11972	698 aa	Known RBP	4.58	□□□□□ -1.68
CTM1	YHR109W	TRK1	P12685	1235 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	PDC5	P16467	563 aa	Known RBP	4.58	□□□□□ -1.68
CTM1	YHR109W	SLA2	P33338	968 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	UGA2	P38067	497 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	ALG14	P38242	237 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	YJL045W	P47052	634 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	MET7	Q08645	548 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	ENV7	Q12003	364 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	YLL054C	Q12244	843 aa		4.58	□□□□□ -1.68
CTM1	YHR109W	ATP4	P05626	244 aa		4.57	□□□□□ -1.68
CTM1	YHR109W	STO1	P34160	861 aa	Known RBP	4.57	□□□□□ -1.68
CTM1	YHR109W	MAE1	P36013	669 aa	Known RBP	4.57	□□□□□ -1.68
CTM1	YHR109W	MCD4	P36051	919 aa		4.57	□□□□□ -1.68
CTM1	YHR109W	PCM1	P38628	557 aa	Known RBP	4.57	□□□□□ -1.68
CTM1	YHR109W	CKB2	P38930	258 aa		4.57	□□□□□ -1.68
CTM1	YHR109W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
CTM1	YHR109W	CAF16	P43569	289 aa		4.57	□□□□□ -1.68
CTM1	YHR109W	ACM1	Q08981	209 aa		4.57	□□□□□ -1.68
CTM1	YHR109W	RPA135	P22138	1203 aa	Known RBP	4.56	□□□□□ -1.68
CTM1	YHR109W	MDJ1	P35191	511 aa		4.56	□□□□□ -1.68
CTM1	YHR109W	OAF1	P39720	1047 aa	Predicted RBP	4.56	□□□□□ -1.68
CTM1	YHR109W	YIR007W	P40566	764 aa		4.56	□□□□□ -1.68
CTM1	YHR109W	NCE103	P53615	221 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms