RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W ESS1P22696 170 aa12.53□□□□□ -0.4
SNF6YHL025W MCM2P29469 868 aa12.53□□□□□ -0.4
SNF6YHL025W SUV3P32580 737 aa12.53□□□□□ -0.4
SNF6YHL025W UBP11P36026 717 aa12.53□□□□□ -0.4
SNF6YHL025W EBP2P36049 427 aaKnown RBP12.53□□□□□ -0.4
SNF6YHL025W PSY4P38193 441 aa12.53□□□□□ -0.4
SNF6YHL025W SIP3P38717 1229 aa12.53□□□□□ -0.4
SNF6YHL025W BRE2P43132 505 aa12.53□□□□□ -0.4
SNF6YHL025W ECM30Q06673 1274 aa12.53□□□□□ -0.4
SNF6YHL025W TFC8Q12308 588 aa12.53□□□□□ -0.4
SNF6YHL025W PRY3P47033 881 aa12.52□□□□□ -0.41
SNF6YHL025W YGR237CP50089 785 aa12.52□□□□□ -0.41
SNF6YHL025W HUL5P53119 910 aa12.52□□□□□ -0.41
SNF6YHL025W SPP382Q06411 708 aaPredicted RBP12.52□□□□□ -0.41
SNF6YHL025W TLG2Q08144 397 aa12.52□□□□□ -0.41
SNF6YHL025W SRD1P09007 221 aa12.51□□□□□ -0.41
SNF6YHL025W CLN3P13365 580 aa12.51□□□□□ -0.41
SNF6YHL025W TKL1P23254 680 aaKnown RBP12.51□□□□□ -0.41
SNF6YHL025W RAM2P29703 316 aa12.51□□□□□ -0.41
SNF6YHL025W VPS29P38759 282 aa12.51□□□□□ -0.41
SNF6YHL025W MXR1P40029 184 aa12.51□□□□□ -0.41
SNF6YHL025W GUP1P53154 560 aa12.51□□□□□ -0.41
SNF6YHL025W DIP5P53388 608 aa12.51□□□□□ -0.41
SNF6YHL025W SEC5P89102 971 aa12.51□□□□□ -0.41
SNF6YHL025W TMA16Q08687 178 aa12.51□□□□□ -0.41
SNF6YHL025W ERP3Q12403 225 aa12.51□□□□□ -0.41
SNF6YHL025W SUP45P12385 437 aaKnown RBP12.5□□□□□ -0.41
SNF6YHL025W PFK1P16861 987 aaKnown RBP12.5□□□□□ -0.41
SNF6YHL025W PRP22P24384 1145 aaKnown RBP12.5□□□□□ -0.41
SNF6YHL025W SEC8P32855 1065 aa12.5□□□□□ -0.41
SNF6YHL025W PIH1P38768 344 aa12.5□□□□□ -0.41
SNF6YHL025W FIR1P40020 876 aa12.5□□□□□ -0.41
SNF6YHL025W AIM21P40563 679 aa12.5□□□□□ -0.41
SNF6YHL025W CTR1P49573 406 aa12.5□□□□□ -0.41
SNF6YHL025W ZPR1P53303 486 aaKnown RBP12.5□□□□□ -0.41
SNF6YHL025W LSC2P53312 427 aa12.5□□□□□ -0.41
SNF6YHL025W YOR131CQ12486 218 aa12.5□□□□□ -0.41
SNF6YHL025W CDC37P06101 506 aaKnown RBP12.49□□□□□ -0.41
SNF6YHL025W PRE10P21242 288 aaKnown RBP RIP-Chip data12.49□□□□□ -0.41not detected
SNF6YHL025W AIP1P46680 615 aaKnown RBP12.49□□□□□ -0.41
SNF6YHL025W CRD1Q07560 283 aa12.49□□□□□ -0.41
SNF6YHL025W SUT2Q12286 268 aa12.49□□□□□ -0.41
SNF6YHL025W OM45P16547 393 aa12.48□□□□□ -0.41
SNF6YHL025W PPS1P38148 807 aa12.48□□□□□ -0.41
SNF6YHL025W REG2P38232 338 aa12.48□□□□□ -0.41
SNF6YHL025W HMF1P40037 129 aaKnown RBP12.48□□□□□ -0.41
SNF6YHL025W FIS1P40515 155 aa12.48□□□□□ -0.41
SNF6YHL025W EBS1Q03466 884 aaKnown RBP12.48□□□□□ -0.41
SNF6YHL025W DUS4Q06063 367 aa12.48□□□□□ -0.41
SNF6YHL025W MET7Q08645 548 aa12.48□□□□□ -0.41
SNF6YHL025W MRC1P25588 1096 aa12.47□□□□□ -0.41
SNF6YHL025W PSO2P30620 661 aa12.47□□□□□ -0.41
SNF6YHL025W YKL091CP33324 310 aaKnown RBP12.47□□□□□ -0.41
SNF6YHL025W WHI3P34761 661 aaKnown RBP12.47□□□□□ -0.41
SNF6YHL025W SAP190P36123 1033 aa12.47□□□□□ -0.41
SNF6YHL025W UBP15P50101 1230 aa12.47□□□□□ -0.41
SNF6YHL025W YGL039WP53183 348 aaKnown RBP12.47□□□□□ -0.41
SNF6YHL025W BRE5P53741 515 aaKnown RBP12.47□□□□□ -0.41
SNF6YHL025W EAR1Q03212 550 aa12.47□□□□□ -0.41
SNF6YHL025W SLD5Q03406 294 aa12.47□□□□□ -0.41
SNF6YHL025W TFC4P33339 1025 aa12.46□□□□□ -0.41
SNF6YHL025W YET1P35723 206 aa12.46□□□□□ -0.41
SNF6YHL025W UIP5P36137 443 aa12.46□□□□□ -0.41
SNF6YHL025W HUL4P40985 892 aa12.46□□□□□ -0.41
SNF6YHL025W YFL034WP43564 1073 aa12.46□□□□□ -0.41
SNF6YHL025W YPL034WQ03083 165 aa12.46□□□□□ -0.41
SNF6YHL025W TCP1P12612 559 aaKnown RBP12.45□□□□□ -0.42
SNF6YHL025W DBP7P36120 742 aaKnown RBP12.45□□□□□ -0.42
SNF6YHL025W AFG3P39925 761 aa12.45□□□□□ -0.42
SNF6YHL025W RPN3P40016 523 aaKnown RBP12.45□□□□□ -0.42
SNF6YHL025W ULP2P40537 1034 aaPredicted RBP12.45□□□□□ -0.42
SNF6YHL025W MGA2P40578 1113 aa12.45□□□□□ -0.42
SNF6YHL025W SVF1Q05515 481 aa12.45□□□□□ -0.42
SNF6YHL025W TCO89Q08921 799 aa12.45□□□□□ -0.42
SNF6YHL025W MDM20Q12387 796 aaKnown RBP12.45□□□□□ -0.42
SNF6YHL025W MAK16P10962 306 aaPredicted RBP12.44□□□□□ -0.42
SNF6YHL025W TVP38P36164 337 aa12.44□□□□□ -0.42
SNF6YHL025W CTM1P38818 585 aa12.44□□□□□ -0.42
SNF6YHL025W BIM1P40013 344 aa12.44□□□□□ -0.42
SNF6YHL025W YFL040WP43562 540 aa12.44□□□□□ -0.42
SNF6YHL025W VPS75P53853 264 aa12.44□□□□□ -0.42
SNF6YHL025W YDL057WQ07379 328 aa12.44□□□□□ -0.42
SNF6YHL025W YAP7Q08182 245 aa12.44□□□□□ -0.42
SNF6YHL025W YOL075CQ08234 1294 aa12.44□□□□□ -0.42
SNF6YHL025W YPL216WQ08964 1102 aa12.44□□□□□ -0.42
SNF6YHL025W PCK1P10963 549 aa12.43□□□□□ -0.42
SNF6YHL025W CYC8P14922 966 aa12.43□□□□□ -0.42
SNF6YHL025W PHO13P19881 312 aa12.43□□□□□ -0.42
SNF6YHL025W RGT1P32862 1170 aa12.43□□□□□ -0.42
SNF6YHL025W TOS3P43637 560 aa12.43□□□□□ -0.42
SNF6YHL025W VID30P53076 958 aa12.43□□□□□ -0.42
SNF6YHL025W NCS2P53923 493 aaPredicted RBP12.43□□□□□ -0.42
SNF6YHL025W YMR321CQ04898 105 aa12.43□□□□□ -0.42
SNF6YHL025W COG4Q06096 861 aa12.43□□□□□ -0.42
SNF6YHL025W CUR1Q06469 252 aa12.43□□□□□ -0.42
SNF6YHL025W YPL277CQ08989 487 aa12.43□□□□□ -0.42
SNF6YHL025W MSH3P25336 1018 aa12.42□□□□□ -0.42
SNF6YHL025W PGM2P37012 569 aaKnown RBP12.42□□□□□ -0.42
SNF6YHL025W FYV8P46949 817 aaKnown RBP12.42□□□□□ -0.42
SNF6YHL025W VPS53P47061 822 aa12.42□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms