RNA–Protein interactions for RNA: YER144C

UBP5, Transcript of Putative ubiquitin-specific protease, yeastyeast

Gene UBP5, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP5YER144C ADR1P07248 1323 aa3.94□□□□□ -1.78
UBP5YER144C TRP2P00899 507 aaKnown RBP3.94□□□□□ -1.78
UBP5YER144C AGP1P25376 633 aa3.94□□□□□ -1.78
UBP5YER144C PRS1P32895 427 aaKnown RBP3.94□□□□□ -1.78
UBP5YER144C DOT5P40553 215 aa3.94□□□□□ -1.78
UBP5YER144C VTC4P47075 721 aa3.94□□□□□ -1.78
UBP5YER144C MDG1P53885 366 aa3.94□□□□□ -1.78
UBP5YER144C KRE33P53914 1056 aaKnown RBP3.94□□□□□ -1.78
UBP5YER144C SHE9Q04172 456 aa3.94□□□□□ -1.78
UBP5YER144C AOS1Q06624 347 aa3.94□□□□□ -1.78
UBP5YER144C RPP2BP02400 110 aaKnown RBP3.93□□□□□ -1.78
UBP5YER144C AI1P03875 834 aa3.93□□□□□ -1.78
UBP5YER144C SEC23P15303 768 aaKnown RBP3.93□□□□□ -1.78
UBP5YER144C VBA5P36172 582 aa3.93□□□□□ -1.78
UBP5YER144C CEM1P39525 442 aa3.93□□□□□ -1.78
UBP5YER144C UTP7P40055 554 aaKnown RBP3.93□□□□□ -1.78
UBP5YER144C CUZ1P53899 274 aa3.93□□□□□ -1.78
UBP5YER144C TY1A-DR3Q12441 440 aa3.93□□□□□ -1.78
UBP5YER144C NUP145P49687 1317 aa3.93□□□□□ -1.78
UBP5YER144C LYS2P07702 1392 aa3.93□□□□□ -1.78
UBP5YER144C CIT1P00890 479 aa3.93□□□□□ -1.78
UBP5YER144C THS1P04801 734 aaKnown RBP3.93□□□□□ -1.78
UBP5YER144C BAS1P22035 811 aa3.93□□□□□ -1.78
UBP5YER144C PWP2P25635 923 aaKnown RBP3.93□□□□□ -1.78
UBP5YER144C HSP104P31539 908 aaKnown RBP3.93□□□□□ -1.78
UBP5YER144C ABD1P32783 436 aaPredicted RBP3.93□□□□□ -1.78
UBP5YER144C RER2P35196 286 aa3.93□□□□□ -1.78
UBP5YER144C RIM11P38615 370 aa3.93□□□□□ -1.78
UBP5YER144C SSN3P39073 555 aa3.93□□□□□ -1.78
UBP5YER144C MAM1P40065 302 aa3.93□□□□□ -1.78
UBP5YER144C MPP10P47083 593 aaKnown RBP3.93□□□□□ -1.78
UBP5YER144C YGR125WP53273 1036 aa3.93□□□□□ -1.78
UBP5YER144C THI22Q06490 572 aa3.93□□□□□ -1.78
UBP5YER144C BRE1Q07457 700 aaKnown RBP3.93□□□□□ -1.78
UBP5YER144C FAL1Q12099 399 aaKnown RBP3.93□□□□□ -1.78
UBP5YER144C PSH1Q12161 406 aa3.93□□□□□ -1.78
UBP5YER144C TMA17Q12513 150 aa3.93□□□□□ -1.78
UBP5YER144C Q0182Q9ZZW1 134 aa3.93□□□□□ -1.78
UBP5YER144C APM2P38700 605 aa3.92□□□□□ -1.78
UBP5YER144C SEC26P41810 973 aaKnown RBP3.92□□□□□ -1.78
UBP5YER144C YGL140CP53120 1219 aa3.92□□□□□ -1.78
UBP5YER144C COG6P53959 839 aa3.92□□□□□ -1.78
UBP5YER144C ADE16P54113 591 aaKnown RBP3.92□□□□□ -1.78
UBP5YER144C KCC4P25389 1037 aa3.92□□□□□ -1.78
UBP5YER144C SNF7P39929 240 aaKnown RBP3.92□□□□□ -1.78
UBP5YER144C UTP8P53276 713 aaKnown RBP3.92□□□□□ -1.78
UBP5YER144C HEF3P53978 1044 aaKnown RBP3.92□□□□□ -1.78
UBP5YER144C NOG1Q02892 647 aaKnown RBP3.92□□□□□ -1.78
UBP5YER144C SBP1P10080 294 aaKnown RBP3.91□□□□□ -1.78
UBP5YER144C GAL11P19659 1081 aa3.91□□□□□ -1.78
UBP5YER144C OSM1P21375 501 aaKnown RBP3.91□□□□□ -1.78
UBP5YER144C HBS1P32769 611 aaKnown RBP3.91□□□□□ -1.78
UBP5YER144C MNN4P36044 1178 aa3.91□□□□□ -1.78
UBP5YER144C YKR075CP36155 307 aa3.91□□□□□ -1.78
UBP5YER144C LDH1P38139 375 aa3.91□□□□□ -1.78
UBP5YER144C IRR1P40541 1150 aa3.91□□□□□ -1.78
UBP5YER144C MON1P53129 644 aa3.91□□□□□ -1.78
UBP5YER144C CMR1Q12510 522 aaKnown RBP3.91□□□□□ -1.78
UBP5YER144C HVG1P0CE11 249 aa3.91□□□□□ -1.78
UBP5YER144C SUI2P20459 304 aaKnown RBP3.91□□□□□ -1.78
UBP5YER144C PYC2P32327 1180 aaKnown RBP3.91□□□□□ -1.78
UBP5YER144C DAL1P32375 460 aa3.91□□□□□ -1.78
UBP5YER144C SLA1P32790 1244 aa3.91□□□□□ -1.78
UBP5YER144C NAB3P38996 802 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
UBP5YER144C NPR1P22211 790 aa3.9□□□□□ -1.78
UBP5YER144C DYS1P38791 387 aa3.9□□□□□ -1.78
UBP5YER144C GYP7P48365 746 aa3.9□□□□□ -1.78
UBP5YER144C YNL034WP53963 612 aa3.9□□□□□ -1.78
UBP5YER144C YNL018CP53976 612 aa3.9□□□□□ -1.78
UBP5YER144C RLP24Q07915 199 aaKnown RBP3.9□□□□□ -1.78
UBP5YER144C YOR296WQ08748 1289 aa3.9□□□□□ -1.78
UBP5YER144C TOP3P13099 656 aa3.9□□□□□ -1.79
UBP5YER144C TRX2P22803 104 aaKnown RBP3.9□□□□□ -1.79
UBP5YER144C DEF1P35732 738 aaKnown RBP3.9□□□□□ -1.79
UBP5YER144C GRX7P38068 203 aa3.9□□□□□ -1.79
UBP5YER144C ISW1P38144 1129 aa3.9□□□□□ -1.79
UBP5YER144C RRP8P38961 392 aaKnown RBP3.9□□□□□ -1.79
UBP5YER144C TFB2Q02939 513 aa3.9□□□□□ -1.79
UBP5YER144C UGO1Q03327 502 aa3.9□□□□□ -1.79
UBP5YER144C ECM16Q04217 1267 aaKnown RBP3.9□□□□□ -1.79
UBP5YER144C YLR225CQ05948 407 aaKnown RBP3.9□□□□□ -1.79
UBP5YER144C RTT109Q07794 436 aa3.9□□□□□ -1.79
UBP5YER144C MDM12Q92328 271 aa3.9□□□□□ -1.79
UBP5YER144C GDH3P39708 457 aa3.89□□□□□ -1.79
UBP5YER144C GPP1P41277 250 aaKnown RBP3.89□□□□□ -1.79
UBP5YER144C RPN11P43588 306 aaKnown RBP3.89□□□□□ -1.79
UBP5YER144C TY4A-JP47023 414 aa3.89□□□□□ -1.79
UBP5YER144C SIW14P53965 281 aa3.89□□□□□ -1.79
UBP5YER144C YMR265CQ03508 461 aaKnown RBP3.89□□□□□ -1.79
UBP5YER144C SND1Q04007 877 aa3.89□□□□□ -1.79
UBP5YER144C MRL1Q06815 381 aa3.89□□□□□ -1.79
UBP5YER144C RVB2Q12464 471 aaKnown RBP3.89□□□□□ -1.79
UBP5YER144C NKP1Q12493 238 aa3.89□□□□□ -1.79
UBP5YER144C HSP60P19882 572 aaKnown RBP3.89□□□□□ -1.79
UBP5YER144C SBA1P28707 216 aaKnown RBP3.89□□□□□ -1.79
UBP5YER144C GIP1P38229 639 aa3.89□□□□□ -1.79
UBP5YER144C YJL181WP46987 611 aa3.89□□□□□ -1.79
UBP5YER144C JJJ2P46997 583 aa3.89□□□□□ -1.79
UBP5YER144C SKP1P52286 194 aa3.89□□□□□ -1.79
UBP5YER144C YBP2P53169 641 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms