RNA–Protein interactions for RNA: YDR332W

IRC3, Transcript of Putative RNA helicase of the DEAH/D-box family, yeast

Gene IRC3, Length 2,070 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC3	YDR332W	MET22	P32179	357 aa		4.09	□□□□□ -1.75
IRC3	YDR332W	CDC12	P32468	407 aa	Known RBP	4.09	□□□□□ -1.75
IRC3	YDR332W	EUG1	P32474	517 aa		4.09	□□□□□ -1.75
IRC3	YDR332W	SPC29	P33419	253 aa		4.09	□□□□□ -1.75
IRC3	YDR332W	ACO2	P39533	789 aa		4.09	□□□□□ -1.75
IRC3	YDR332W	TOK1	P40310	691 aa		4.09	□□□□□ -1.75
IRC3	YDR332W	YIR007W	P40566	764 aa		4.09	□□□□□ -1.75
IRC3	YDR332W	GYP8	P43570	497 aa		4.09	□□□□□ -1.75
IRC3	YDR332W	ELA1	P53861	379 aa	Predicted RBP	4.09	□□□□□ -1.75
IRC3	YDR332W	HRQ1	Q05549	1077 aa		4.09	□□□□□ -1.75
IRC3	YDR332W	YPL260W	Q08977	551 aa		4.09	□□□□□ -1.75
IRC3	YDR332W	SLP1	Q12232	587 aa		4.09	□□□□□ -1.75
IRC3	YDR332W	KNS1	P32350	737 aa	Predicted RBP	4.09	□□□□□ -1.76
IRC3	YDR332W	SLA2	P33338	968 aa		4.09	□□□□□ -1.76
IRC3	YDR332W	MTC2	P34246	357 aa		4.09	□□□□□ -1.76
IRC3	YDR332W	TYS1	P36421	394 aa	Known RBP	4.09	□□□□□ -1.76
IRC3	YDR332W	YBR071W	P38243	211 aa		4.09	□□□□□ -1.76
IRC3	YDR332W	GPB2	P39717	880 aa		4.09	□□□□□ -1.76
IRC3	YDR332W	SDA1	P53313	767 aa	Known RBP	4.09	□□□□□ -1.76
IRC3	YDR332W	YGR283C	P53336	341 aa	Predicted RBP	4.09	□□□□□ -1.76
IRC3	YDR332W	LCB5	Q06147	687 aa	Known RBP	4.09	□□□□□ -1.76
IRC3	YDR332W	BUD21	Q08492	214 aa	Predicted RBP	4.09	□□□□□ -1.76
IRC3	YDR332W	LAP2	Q10740	671 aa		4.09	□□□□□ -1.76
IRC3	YDR332W	SPO21	Q12411	609 aa		4.09	□□□□□ -1.76
IRC3	YDR332W	NFS1	P25374	497 aa		4.08	□□□□□ -1.76
IRC3	YDR332W	PGM2	P37012	569 aa	Known RBP	4.08	□□□□□ -1.76
IRC3	YDR332W	BAP2	P38084	609 aa		4.08	□□□□□ -1.76
IRC3	YDR332W	CEM1	P39525	442 aa		4.08	□□□□□ -1.76
IRC3	YDR332W	SAH1	P39954	449 aa	Known RBP	4.08	□□□□□ -1.76
IRC3	YDR332W	MTC3	P53077	123 aa		4.08	□□□□□ -1.76
IRC3	YDR332W	MTQ2	Q03920	221 aa	Predicted RBP	4.08	□□□□□ -1.76
IRC3	YDR332W	LCD1	Q04377	747 aa		4.08	□□□□□ -1.76
IRC3	YDR332W	AVO1	Q08236	1176 aa		4.08	□□□□□ -1.76
IRC3	YDR332W	MDJ1	P35191	511 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	YRO2	P38079	344 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	NMD3	P38861	518 aa	Known RBP	4.07	□□□□□ -1.76
IRC3	YDR332W	NPP2	P39997	493 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	KIP3	P53086	805 aa	Known RBP	4.07	□□□□□ -1.76
IRC3	YDR332W	TPO2	P53283	614 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	SND1	Q04007	877 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	SLX4	Q12098	748 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	NUP145	P49687	1317 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	ADE8	P04161	214 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	PPH3	P32345	308 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	ATG14	P38270	344 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	NIT1	P40447	199 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	GCR2	Q01722	534 aa		4.07	□□□□□ -1.76
IRC3	YDR332W	RAD18	P10862	487 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	SFL1	P20134	766 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	MAE1	P36013	669 aa	Known RBP	4.06	□□□□□ -1.76
IRC3	YDR332W	CAF16	P43569	289 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	YDR444W	Q04093	687 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	YLR257W	Q06146	321 aa	Known RBP	4.06	□□□□□ -1.76
IRC3	YDR332W	FAP7	Q12055	197 aa	Predicted RBP	4.06	□□□□□ -1.76
IRC3	YDR332W	PIF1	P07271	859 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	SAC7	P17121	654 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	SNF5	P18480	905 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	PLC1	P32383	869 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	MCD4	P36051	919 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	TSL1	P38427	1098 aa	Known RBP	4.06	□□□□□ -1.76
IRC3	YDR332W	YJR096W	P47137	282 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	YMR074C	Q04773	145 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	RCL1	Q08096	367 aa	Predicted RBP	4.06	□□□□□ -1.76
IRC3	YDR332W	ENV7	Q12003	364 aa		4.06	□□□□□ -1.76
IRC3	YDR332W	GSY1	P23337	708 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	PRO1	P32264	428 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	REC104	P33323	182 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	YEL1	P34225	687 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	ALG14	P38242	237 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	PCM1	P38628	557 aa	Known RBP	4.05	□□□□□ -1.76
IRC3	YDR332W	RPN3	P40016	523 aa	Known RBP	4.05	□□□□□ -1.76
IRC3	YDR332W	YJL045W	P47052	634 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	YKE2	P52553	114 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	YNL034W	P53963	612 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	YNL018C	P53976	612 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	ATP25	Q03153	612 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	DOT1	Q04089	582 aa	Known RBP	4.05	□□□□□ -1.76
IRC3	YDR332W	RSC3	Q06639	885 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	ACM1	Q08981	209 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	YOR223W	Q12015	292 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	YLL054C	Q12244	843 aa		4.05	□□□□□ -1.76
IRC3	YDR332W	MIH1	P23748	554 aa		4.04	□□□□□ -1.76
IRC3	YDR332W	UGA2	P38067	497 aa		4.04	□□□□□ -1.76
IRC3	YDR332W	FUI1	P38196	639 aa		4.04	□□□□□ -1.76
IRC3	YDR332W	HSE1	P38753	452 aa		4.04	□□□□□ -1.76
IRC3	YDR332W	SRP1	Q02821	542 aa	Known RBP	4.04	□□□□□ -1.76
IRC3	YDR332W	TMA7	Q3E764	64 aa	Known RBP	4.04	□□□□□ -1.76
IRC3	YDR332W	VPS24	P36095	224 aa	Known RBP	4.04	□□□□□ -1.76
IRC3	YDR332W	GPT2	P36148	743 aa		4.04	□□□□□ -1.76
IRC3	YDR332W	YBR238C	P38330	731 aa	Known RBP	4.04	□□□□□ -1.76
IRC3	YDR332W	SUB1	P54000	292 aa	Known RBP	4.04	□□□□□ -1.76
IRC3	YDR332W	EAR1	Q03212	550 aa		4.04	□□□□□ -1.76
IRC3	YDR332W	HFD1	Q04458	532 aa		4.04	□□□□□ -1.76
IRC3	YDR332W	MPD2	Q99316	277 aa		4.04	□□□□□ -1.76
IRC3	YDR332W	PWP2	P25635	923 aa	Known RBP	4.03	□□□□□ -1.76
IRC3	YDR332W	HIR1	P32479	840 aa		4.03	□□□□□ -1.76
IRC3	YDR332W	YSC84	P32793	468 aa		4.03	□□□□□ -1.76
IRC3	YDR332W	SMY2	P32909	740 aa	Known RBP	4.03	□□□□□ -1.76
IRC3	YDR332W	NNK1	P36003	928 aa		4.03	□□□□□ -1.76
IRC3	YDR332W	EMC3	P36039	253 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms