RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS13, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS13	YDR064W	SRB8	P25648	1427 aa		4.26	□□□□□ -1.73
RPS13	YDR064W	RTC1	Q08281	1341 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	TOM70	P07213	617 aa	Known RBP	4.25	□□□□□ -1.73
RPS13	YDR064W	RPS6A	P0CX37	236 aa	Known RBP	4.25	□□□□□ -1.73
RPS13	YDR064W	RPS6B	P0CX38	236 aa	Predicted RBP	4.25	□□□□□ -1.73
RPS13	YDR064W	KRR1	P25586	316 aa	Predicted RBP	4.25	□□□□□ -1.73
RPS13	YDR064W	HEM3	P28789	327 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	IRE1	P32361	1115 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	SSO1	P32867	290 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	VPS24	P36095	224 aa	Known RBP	4.25	□□□□□ -1.73
RPS13	YDR064W	MIC60	P36112	540 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	YRO2	P38079	344 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	CIC1	P38779	376 aa	Known RBP	4.25	□□□□□ -1.73
RPS13	YDR064W	PEX18	P38855	283 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	YER034W	P40022	185 aa	Known RBP	4.25	□□□□□ -1.73
RPS13	YDR064W	KTR7	P40504	517 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	MET12	P46151	657 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	INP52	P50942	1183 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	DCP2	P53550	970 aa	Known RBP	4.25	□□□□□ -1.73
RPS13	YDR064W	YNL165W	P53891	406 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	KRE33	P53914	1056 aa	Known RBP	4.25	□□□□□ -1.73
RPS13	YDR064W	MSH6	Q03834	1242 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	UBX2	Q04228	584 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	VPS20	Q04272	221 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	ARV1	Q06541	321 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	SYT1	Q06836	1226 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	ISA1	Q07821	250 aa	Predicted RBP	4.25	□□□□□ -1.73
RPS13	YDR064W	CIR2	Q08822	631 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	ENT1	Q12518	454 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	YBL111C	Q3E7Y5	667 aa		4.25	□□□□□ -1.73
RPS13	YDR064W	TSC11	P40061	1430 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	CDC37	P06101	506 aa	Known RBP	4.24	□□□□□ -1.73
RPS13	YDR064W	KSS1	P14681	368 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	HNM1	P19807	563 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	SEC14	P24280	304 aa	Known RBP	4.24	□□□□□ -1.73
RPS13	YDR064W	PDC6	P26263	563 aa	Known RBP	4.24	□□□□□ -1.73
RPS13	YDR064W	PAP1	P29468	568 aa	Known RBP	4.24	□□□□□ -1.73
RPS13	YDR064W	NTH2	P35172	780 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	JNM1	P36224	373 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	SLX1	P38324	304 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	HSM3	P38348	480 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	TIF5	P38431	405 aa	Known RBP	4.24	□□□□□ -1.73
RPS13	YDR064W	APE4	P38821	490 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	RTT107	P38850	1070 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	RPL34B	P40525	121 aa	Known RBP	4.24	□□□□□ -1.73
RPS13	YDR064W	RAD17	P48581	401 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	SHE10	P53075	577 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	RTC4	P53850	401 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	YNL144C	P53907	740 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	RPN4	Q03465	531 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	MTC5	Q03897	1148 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	ARO80	Q04052	950 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	ECM11	Q04110	302 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	RAD33	Q04231	177 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	RNH1	Q04740	348 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	YDL073W	Q07454	984 aa		4.24	□□□□□ -1.73
RPS13	YDR064W	NOB1	Q08444	459 aa	Known RBP	4.24	□□□□□ -1.73
RPS13	YDR064W	RKM1	Q08961	583 aa	Predicted RBP	4.24	□□□□□ -1.73
RPS13	YDR064W	TUF1	P02992	437 aa	Known RBP	4.23	□□□□□ -1.73
RPS13	YDR064W	THS1	P04801	734 aa	Known RBP	4.23	□□□□□ -1.73
RPS13	YDR064W	TPM1	P17536	199 aa	Known RBP	4.23	□□□□□ -1.73
RPS13	YDR064W	STE11	P23561	717 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
RPS13	YDR064W	SMY2	P32909	740 aa	Known RBP	4.23	□□□□□ -1.73
RPS13	YDR064W	YKL100C	P34248	587 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	TTI1	P36097	1038 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	MXR1	P40029	184 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	MAD1	P40957	749 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	PHB1	P40961	287 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	SPR3	P41901	512 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	YFL066C	P43538	392 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	SRB7	P47822	140 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	NUP84	P52891	726 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	HOS3	Q02959	697 aa	Known RBP	4.23	□□□□□ -1.73
RPS13	YDR064W	INP2	Q03824	705 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	SPP382	Q06411	708 aa	Predicted RBP	4.23	□□□□□ -1.73
RPS13	YDR064W	CSR1	Q06705	408 aa	Known RBP	4.23	□□□□□ -1.73
RPS13	YDR064W	DNL4	Q08387	944 aa	Predicted RBP	4.23	□□□□□ -1.73
RPS13	YDR064W	THI72	Q08579	599 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	YPL277C	Q08989	487 aa		4.23	□□□□□ -1.73
RPS13	YDR064W	RRP36	Q12481	300 aa	Predicted RBP	4.23	□□□□□ -1.73
RPS13	YDR064W	NOT5	Q12514	560 aa	Predicted RBP	4.23	□□□□□ -1.73
RPS13	YDR064W	LSO2	Q3E772	92 aa	Known RBP	4.23	□□□□□ -1.73
RPS13	YDR064W	RED1	P14291	827 aa		4.22	□□□□□ -1.73
RPS13	YDR064W	MCM3	P24279	971 aa	Known RBP	4.22	□□□□□ -1.73
RPS13	YDR064W	MET4	P32389	672 aa		4.22	□□□□□ -1.73
RPS13	YDR064W	ELM1	P32801	640 aa		4.22	□□□□□ -1.73
RPS13	YDR064W	UIP5	P36137	443 aa		4.22	□□□□□ -1.73
RPS13	YDR064W	GRX7	P38068	203 aa		4.22	□□□□□ -1.73
RPS13	YDR064W	YBL028C	P38202	106 aa		4.22	□□□□□ -1.73
RPS13	YDR064W	HSE1	P38753	452 aa		4.22	□□□□□ -1.73
RPS13	YDR064W	SMC2	P38989	1170 aa	Known RBP	4.22	□□□□□ -1.73
RPS13	YDR064W	SBE2	P42223	864 aa	Known RBP	4.22	□□□□□ -1.73
RPS13	YDR064W	UTP22	P53254	1237 aa	Predicted RBP	4.22	□□□□□ -1.73
RPS13	YDR064W	SDA1	P53313	767 aa	Known RBP	4.22	□□□□□ -1.73
RPS13	YDR064W	RNH70	P53331	553 aa		4.22	□□□□□ -1.73
RPS13	YDR064W	NSG2	P53898	299 aa		4.22	□□□□□ -1.73
RPS13	YDR064W	LCD1	Q04377	747 aa		4.22	□□□□□ -1.73
RPS13	YDR064W	GRC3	Q07845	632 aa		4.22	□□□□□ -1.73
RPS13	YDR064W	WHI5	Q12416	295 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms