RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W YGR273CP53329 174 aa8.66□□□□□ -1.02
ABP1YCR088W CWC22P53333 577 aaKnown RBP8.66□□□□□ -1.02
ABP1YCR088W DIG1Q03063 452 aaKnown RBP8.66□□□□□ -1.02
ABP1YCR088W ERG11P10614 530 aa8.65□□□□□ -1.02
ABP1YCR088W SSB1P11484 613 aaKnown RBP8.65□□□□□ -1.02
ABP1YCR088W SMY1P32364 656 aaKnown RBP8.65□□□□□ -1.02
ABP1YCR088W SWE1P32944 819 aa8.65□□□□□ -1.02
ABP1YCR088W SAS3P34218 831 aa8.65□□□□□ -1.02
ABP1YCR088W SSB2P40150 613 aaKnown RBP8.65□□□□□ -1.02
ABP1YCR088W MMM1P41800 426 aa8.65□□□□□ -1.02
ABP1YCR088W SUE1Q06524 206 aa8.65□□□□□ -1.02
ABP1YCR088W DAS2Q12084 232 aa8.65□□□□□ -1.02
ABP1YCR088W RPS7AP26786 190 aaKnown RBP8.64□□□□□ -1.03
ABP1YCR088W EMP47P43555 445 aa8.64□□□□□ -1.03
ABP1YCR088W VTI1Q04338 217 aa8.64□□□□□ -1.03
ABP1YCR088W PLP2Q12017 286 aa8.64□□□□□ -1.03
ABP1YCR088W RAM2P29703 316 aa8.63□□□□□ -1.03
ABP1YCR088W GCG1P32656 232 aaKnown RBP8.63□□□□□ -1.03
ABP1YCR088W LAS1P36146 502 aaPredicted RBP8.63□□□□□ -1.03
ABP1YCR088W SMC2P38989 1170 aaKnown RBP8.63□□□□□ -1.03
ABP1YCR088W GUP1P53154 560 aa8.63□□□□□ -1.03
ABP1YCR088W BTN2P53286 410 aa8.63□□□□□ -1.03
ABP1YCR088W CSM3Q04659 317 aa8.63□□□□□ -1.03
ABP1YCR088W OPY2Q06810 360 aa8.63□□□□□ -1.03
ABP1YCR088W YDL057WQ07379 328 aa8.63□□□□□ -1.03
ABP1YCR088W MLH2Q07980 695 aa8.63□□□□□ -1.03
ABP1YCR088W FLO11P08640 1367 aa8.63□□□□□ -1.03
ABP1YCR088W CKA2P19454 339 aa8.63□□□□□ -1.03
ABP1YCR088W SRM1P21827 482 aa8.63□□□□□ -1.03
ABP1YCR088W GSY1P23337 708 aa8.63□□□□□ -1.03
ABP1YCR088W TRK2P28584 889 aa8.63□□□□□ -1.03
ABP1YCR088W SMC1P32908 1225 aa8.63□□□□□ -1.03
ABP1YCR088W JNM1P36224 373 aa8.63□□□□□ -1.03
ABP1YCR088W MAD1P40957 749 aa8.63□□□□□ -1.03
ABP1YCR088W UBX2Q04228 584 aa8.63□□□□□ -1.03
ABP1YCR088W UTP14Q04500 899 aaKnown RBP8.63□□□□□ -1.03
ABP1YCR088W STE23Q06010 1027 aa8.63□□□□□ -1.03
ABP1YCR088W CLF1Q12309 687 aaPredicted RBP8.63□□□□□ -1.03
ABP1YCR088W SMC6Q12749 1114 aa8.63□□□□□ -1.03
ABP1YCR088W ARG4P04076 463 aaPredicted RBP8.62□□□□□ -1.03
ABP1YCR088W SCP160P06105 1222 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03 RIP-Chip
ABP1YCR088W SAM2P19358 384 aaKnown RBP8.62□□□□□ -1.03
ABP1YCR088W PRE8P23639 250 aa8.62□□□□□ -1.03
ABP1YCR088W CDC60P26637 1090 aaKnown RBP8.62□□□□□ -1.03
ABP1YCR088W PIH1P38768 344 aa8.62□□□□□ -1.03
ABP1YCR088W GAA1P39012 614 aa8.62□□□□□ -1.03
ABP1YCR088W YFL034WP43564 1073 aa8.62□□□□□ -1.03
ABP1YCR088W SKG3Q06315 1026 aa8.62□□□□□ -1.03
ABP1YCR088W YLH47Q06493 454 aa8.62□□□□□ -1.03
ABP1YCR088W PFF1P38244 976 aa8.61□□□□□ -1.03
ABP1YCR088W SIP3P38717 1229 aa8.61□□□□□ -1.03
ABP1YCR088W TDA3P38758 523 aa8.61□□□□□ -1.03
ABP1YCR088W NDT80P38830 627 aa8.61□□□□□ -1.03
ABP1YCR088W YNL320WP42840 284 aa8.61□□□□□ -1.03
ABP1YCR088W NBP1P52919 319 aaPredicted RBP8.61□□□□□ -1.03
ABP1YCR088W YMR074CQ04773 145 aa8.61□□□□□ -1.03
ABP1YCR088W TCO89Q08921 799 aa8.61□□□□□ -1.03
ABP1YCR088W TUS1Q06412 1307 aa8.61□□□□□ -1.03
ABP1YCR088W APL1P27351 700 aa8.61□□□□□ -1.03
ABP1YCR088W NIP100P33420 868 aa8.61□□□□□ -1.03
ABP1YCR088W BCH2P36122 765 aa8.61□□□□□ -1.03
ABP1YCR088W TRS85P46944 698 aa8.61□□□□□ -1.03
ABP1YCR088W ERO1Q03103 563 aa8.61□□□□□ -1.03
ABP1YCR088W VIP1Q06685 1146 aaKnown RBP8.61□□□□□ -1.03
ABP1YCR088W OXR1Q08952 273 aa8.61□□□□□ -1.03
ABP1YCR088W MAK16P10962 306 aaPredicted RBP8.6□□□□□ -1.03
ABP1YCR088W PRE10P21242 288 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
ABP1YCR088W PSE1P32337 1089 aaKnown RBP8.6□□□□□ -1.03
ABP1YCR088W SEC8P32855 1065 aa8.6□□□□□ -1.03
ABP1YCR088W PGA2P53903 129 aa8.6□□□□□ -1.03
ABP1YCR088W YDR338CQ05497 695 aa8.6□□□□□ -1.03
ABP1YCR088W YPR078CQ06813 372 aa8.6□□□□□ -1.03
ABP1YCR088W PYC1P11154 1178 aaKnown RBP8.59□□□□□ -1.03
ABP1YCR088W PRP16P15938 1071 aaPredicted RBP8.59□□□□□ -1.03
ABP1YCR088W BUD31P25337 157 aaPredicted RBP8.59□□□□□ -1.03
ABP1YCR088W ULP2P40537 1034 aaPredicted RBP8.59□□□□□ -1.03
ABP1YCR088W KAP114P53067 1004 aa8.59□□□□□ -1.03
ABP1YCR088W TOF1P53840 1238 aa8.59□□□□□ -1.03
ABP1YCR088W BUL2Q03758 920 aaKnown RBP8.59□□□□□ -1.03
ABP1YCR088W ILV1P00927 576 aaKnown RBP8.58□□□□□ -1.04
ABP1YCR088W PFK1P16861 987 aaKnown RBP8.58□□□□□ -1.04
ABP1YCR088W RPL8AP17076 256 aaKnown RBP8.58□□□□□ -1.04
ABP1YCR088W YKU70P32807 602 aa8.58□□□□□ -1.04
ABP1YCR088W SPP381P38282 291 aaPredicted RBP8.58□□□□□ -1.04
ABP1YCR088W UBP9P39967 754 aa8.58□□□□□ -1.04
ABP1YCR088W BRE2P43132 505 aa8.58□□□□□ -1.04
ABP1YCR088W MSN5P52918 1224 aa8.58□□□□□ -1.04
ABP1YCR088W ECI1Q05871 280 aa8.58□□□□□ -1.04
ABP1YCR088W APL5Q08951 932 aaKnown RBP8.58□□□□□ -1.04
ABP1YCR088W FAL1Q12099 399 aaKnown RBP8.58□□□□□ -1.04
ABP1YCR088W FKS1P38631 1876 aaKnown RBP8.58□□□□□ -1.04
ABP1YCR088W TRP2P00899 507 aaKnown RBP8.58□□□□□ -1.04
ABP1YCR088W PRP9P19736 530 aaKnown RBP8.58□□□□□ -1.04
ABP1YCR088W UBP1P25037 809 aa8.58□□□□□ -1.04
ABP1YCR088W YKL023WP36103 277 aaKnown RBP8.58□□□□□ -1.04
ABP1YCR088W VPS45P38932 577 aa8.58□□□□□ -1.04
ABP1YCR088W ZRT2Q12436 422 aa8.58□□□□□ -1.04
ABP1YCR088W NAM7P30771 971 aaKnown RBP8.57□□□□□ -1.04
ABP1YCR088W YEL1P34225 687 aa8.57□□□□□ -1.04
ABP1YCR088W OLA1P38219 394 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 139.8 ms