RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSM3	YBR272C	BUG1	Q12191	341 aa		7.33	□□□□□ -1.24
HSM3	YBR272C	DPH6	Q12429	685 aa		7.33	□□□□□ -1.24
HSM3	YBR272C	CTT1	P06115	562 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	RPB2	P08518	1224 aa	Known RBP	7.32	□□□□□ -1.24
HSM3	YBR272C	HOM3	P10869	527 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	ITR1	P30605	584 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	SSO1	P32867	290 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	PXA2	P34230	853 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	CCL1	P37366	393 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	TOS1	P38288	455 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	YER156C	P40093	338 aa	Known RBP	7.32	□□□□□ -1.24
HSM3	YBR272C	FMP10	P40098	244 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	RSM25	P40496	264 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	SYG1	P40528	902 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	VID28	P40547	921 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	RIM21	P48565	533 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	CWH41	P53008	833 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	SVL3	Q03088	825 aa	Known RBP	7.32	□□□□□ -1.24
HSM3	YBR272C	HOT1	Q03213	719 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	MTC5	Q03897	1148 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	RSA3	Q05942	220 aa	Known RBP	7.32	□□□□□ -1.24
HSM3	YBR272C	YLH47	Q06493	454 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	RSC3	Q06639	885 aa		7.32	□□□□□ -1.24
HSM3	YBR272C	APC1	P53886	1748 aa		7.31	□□□□□ -1.24
HSM3	YBR272C	HIS3	P06633	220 aa		7.31	□□□□□ -1.24
HSM3	YBR272C	ADH4	P10127	382 aa		7.31	□□□□□ -1.24
HSM3	YBR272C	TRM1	P15565	570 aa	Known RBP	7.31	□□□□□ -1.24
HSM3	YBR272C	MCM3	P24279	971 aa	Known RBP	7.31	□□□□□ -1.24
HSM3	YBR272C	KRR1	P25586	316 aa	Predicted RBP	7.31	□□□□□ -1.24
HSM3	YBR272C	HSP78	P33416	811 aa		7.31	□□□□□ -1.24
HSM3	YBR272C	STE13	P33894	931 aa		7.31	□□□□□ -1.24
HSM3	YBR272C	NUP84	P52891	726 aa		7.31	□□□□□ -1.24
HSM3	YBR272C	PEX14	P53112	341 aa		7.31	□□□□□ -1.24
HSM3	YBR272C	YNL144C	P53907	740 aa		7.31	□□□□□ -1.24
HSM3	YBR272C	MEC3	Q02574	474 aa		7.31	□□□□□ -1.24
HSM3	YBR272C	BDF2	Q07442	638 aa		7.31	□□□□□ -1.24
HSM3	YBR272C	PET122	P10355	254 aa		7.3	□□□□□ -1.24
HSM3	YBR272C	ACE2	P21192	770 aa		7.3	□□□□□ -1.24
HSM3	YBR272C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.3	□□□□□ -1.24	not detected
HSM3	YBR272C	AAD3	P25612	363 aa		7.3	□□□□□ -1.24
HSM3	YBR272C	BMH1	P29311	267 aa	Known RBP	7.3	□□□□□ -1.24
HSM3	YBR272C	YEL043W	P32618	956 aa		7.3	□□□□□ -1.24
HSM3	YBR272C	RSM22	P36056	628 aa		7.3	□□□□□ -1.24
HSM3	YBR272C	SET3	P36124	751 aa		7.3	□□□□□ -1.24
HSM3	YBR272C	TIF5	P38431	405 aa	Known RBP	7.3	□□□□□ -1.24
HSM3	YBR272C	YHB1	P39676	399 aa	Known RBP	7.3	□□□□□ -1.24
HSM3	YBR272C	SGM1	P47166	707 aa		7.3	□□□□□ -1.24
HSM3	YBR272C	RNH70	P53331	553 aa		7.3	□□□□□ -1.24
HSM3	YBR272C	ZDS2	P54786	942 aa		7.3	□□□□□ -1.24
HSM3	YBR272C	HPC2	Q01448	625 aa		7.3	□□□□□ -1.24
HSM3	YBR272C	YDR090C	Q03193	310 aa		7.3	□□□□□ -1.24
HSM3	YBR272C	OYE2	Q03558	400 aa	Known RBP	7.3	□□□□□ -1.24
HSM3	YBR272C	ADE13	Q05911	482 aa	Known RBP	7.3	□□□□□ -1.24
HSM3	YBR272C	DIT1	P21623	536 aa		7.29	□□□□□ -1.24
HSM3	YBR272C	CDC60	P26637	1090 aa	Known RBP	7.29	□□□□□ -1.24
HSM3	YBR272C	HSP104	P31539	908 aa	Known RBP	7.29	□□□□□ -1.24
HSM3	YBR272C	TPS2	P31688	896 aa	Known RBP	7.29	□□□□□ -1.24
HSM3	YBR272C	RPC34	P32910	317 aa		7.29	□□□□□ -1.24
HSM3	YBR272C	UBC6	P33296	250 aa	Predicted RBP	7.29	□□□□□ -1.24
HSM3	YBR272C	TRZ1	P36159	838 aa	Predicted RBP	7.29	□□□□□ -1.24
HSM3	YBR272C	GRX7	P38068	203 aa		7.29	□□□□□ -1.24
HSM3	YBR272C	YBR242W	P38331	238 aa		7.29	□□□□□ -1.24
HSM3	YBR272C	RGA1	P39083	1007 aa		7.29	□□□□□ -1.24
HSM3	YBR272C	DOT6	P40059	670 aa	Known RBP	7.29	□□□□□ -1.24
HSM3	YBR272C	CST6	P40535	587 aa		7.29	□□□□□ -1.24
HSM3	YBR272C	URB2	P47108	1174 aa		7.29	□□□□□ -1.24
HSM3	YBR272C	YGL242C	P53066	181 aa		7.29	□□□□□ -1.24
HSM3	YBR272C	POB3	Q04636	552 aa	Known RBP	7.29	□□□□□ -1.24
HSM3	YBR272C	TLG2	Q08144	397 aa		7.29	□□□□□ -1.24
HSM3	YBR272C	MHP1	P43638	1398 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	PMA2	P19657	947 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	SPE2	P21182	396 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	MGM1	P32266	881 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	YBL028C	P38202	106 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	PBY1	P38254	753 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	RIM11	P38615	370 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	APE4	P38821	490 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	BDH2	P39713	417 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	SSN8	P47821	323 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	SHE10	P53075	577 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	IPI3	P53877	555 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	ADE16	P54113	591 aa	Known RBP	7.28	□□□□□ -1.24
HSM3	YBR272C	ABP140	Q08641	628 aa	Known RBP	7.28	□□□□□ -1.24
HSM3	YBR272C	OSH2	Q12451	1283 aa		7.28	□□□□□ -1.24
HSM3	YBR272C	FOB1	O13329	566 aa		7.27	□□□□□ -1.24
HSM3	YBR272C	TRX2	P22803	104 aa	Known RBP	7.27	□□□□□ -1.24
HSM3	YBR272C	PGS1	P25578	521 aa		7.27	□□□□□ -1.24
HSM3	YBR272C	MRC1	P25588	1096 aa		7.27	□□□□□ -1.24
HSM3	YBR272C	VPH2	P32341	215 aa		7.27	□□□□□ -1.24
HSM3	YBR272C	BUD2	P33314	1104 aa		7.27	□□□□□ -1.24
HSM3	YBR272C	YKL063C	P35725	167 aa		7.27	□□□□□ -1.24
HSM3	YBR272C	FUI1	P38196	639 aa		7.27	□□□□□ -1.24
HSM3	YBR272C	IFA38	P38286	347 aa		7.27	□□□□□ -1.24
HSM3	YBR272C	YHR020W	P38708	688 aa	Known RBP	7.27	□□□□□ -1.24
HSM3	YBR272C	SMC2	P38989	1170 aa	Known RBP	7.27	□□□□□ -1.24
HSM3	YBR272C	STM1	P39015	273 aa	Known RBP	7.27	□□□□□ -1.24
HSM3	YBR272C	MNT3	P40549	630 aa		7.27	□□□□□ -1.24
HSM3	YBR272C	JJJ2	P46997	583 aa		7.27	□□□□□ -1.24
HSM3	YBR272C	APS3	P47064	194 aa		7.27	□□□□□ -1.24
HSM3	YBR272C	ACF4	P47129	309 aa		7.27	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms