RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C TOP3P13099 656 aa5.5□□□□□ -1.53
NPL4YBR170C NAM7P30771 971 aaKnown RBP5.5□□□□□ -1.53
NPL4YBR170C UBP5P39944 805 aa5.5□□□□□ -1.53
NPL4YBR170C MPH1P40562 993 aa5.5□□□□□ -1.53
NPL4YBR170C PMT3P47190 753 aa5.5□□□□□ -1.53
NPL4YBR170C UTP22P53254 1237 aaPredicted RBP5.5□□□□□ -1.53
NPL4YBR170C TMA17Q12513 150 aa5.5□□□□□ -1.53
NPL4YBR170C MDM12Q92328 271 aa5.5□□□□□ -1.53
NPL4YBR170C MEF1P25039 761 aa5.49□□□□□ -1.53
NPL4YBR170C AFG2P32794 780 aa5.49□□□□□ -1.53
NPL4YBR170C PAN5P38787 379 aa5.49□□□□□ -1.53
NPL4YBR170C SIP5P40210 489 aaKnown RBP5.49□□□□□ -1.53
NPL4YBR170C YIG1Q08956 461 aa5.49□□□□□ -1.53
NPL4YBR170C HAS1Q03532 505 aaKnown RBP5.48□□□□□ -1.53
NPL4YBR170C RKM2Q03942 479 aa5.48□□□□□ -1.53
NPL4YBR170C THI73Q07904 523 aa5.48□□□□□ -1.53
NPL4YBR170C TOM70P07213 617 aaKnown RBP5.48□□□□□ -1.53
NPL4YBR170C CDC11P32458 415 aa5.48□□□□□ -1.53
NPL4YBR170C YJR120WP47157 116 aa5.48□□□□□ -1.53
NPL4YBR170C HNT2P49775 206 aa5.48□□□□□ -1.53
NPL4YBR170C GPG1P53130 126 aa5.48□□□□□ -1.53
NPL4YBR170C YLR001CQ07895 862 aa5.48□□□□□ -1.53
NPL4YBR170C NUP145P49687 1317 aa5.48□□□□□ -1.53
NPL4YBR170C ARL1P38116 183 aaKnown RBP5.47□□□□□ -1.53
NPL4YBR170C YBR284WP38150 797 aa5.47□□□□□ -1.53
NPL4YBR170C UME1Q03010 460 aa5.47□□□□□ -1.53
NPL4YBR170C MSB1P21339 1137 aaKnown RBP5.46□□□□□ -1.54
NPL4YBR170C MLS1P30952 554 aa5.46□□□□□ -1.54
NPL4YBR170C ALG3P38179 458 aa5.46□□□□□ -1.54
NPL4YBR170C NEO1P40527 1151 aa5.46□□□□□ -1.54
NPL4YBR170C UBP6P43593 499 aaKnown RBP5.46□□□□□ -1.54
NPL4YBR170C GUP1P53154 560 aa5.46□□□□□ -1.54
NPL4YBR170C RGD1P38339 666 aa5.45□□□□□ -1.54
NPL4YBR170C DSS1P39112 969 aa5.45□□□□□ -1.54
NPL4YBR170C SEC26P41810 973 aaKnown RBP5.45□□□□□ -1.54
NPL4YBR170C GUS1P46655 708 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
NPL4YBR170C TPO2P53283 614 aa5.45□□□□□ -1.54
NPL4YBR170C YDR306CQ06640 478 aa5.45□□□□□ -1.54
NPL4YBR170C GNT1Q12096 491 aa5.45□□□□□ -1.54
NPL4YBR170C MSD1P15179 658 aaKnown RBP5.45□□□□□ -1.54
NPL4YBR170C DOM34P33309 386 aa5.45□□□□□ -1.54
NPL4YBR170C ATG14P38270 344 aa5.45□□□□□ -1.54
NPL4YBR170C SDA1P53313 767 aaKnown RBP5.45□□□□□ -1.54
NPL4YBR170C YNR063WP53749 607 aa5.45□□□□□ -1.54
NPL4YBR170C VBA3P25594 458 aa5.44□□□□□ -1.54
NPL4YBR170C PET10P36139 283 aa5.44□□□□□ -1.54
NPL4YBR170C NIT1P40447 199 aa5.44□□□□□ -1.54
NPL4YBR170C MEC3Q02574 474 aa5.44□□□□□ -1.54
NPL4YBR170C YOR378WQ08902 515 aa5.44□□□□□ -1.54
NPL4YBR170C SLX4Q12098 748 aa5.44□□□□□ -1.54
NPL4YBR170C GSY1P23337 708 aa5.43□□□□□ -1.54
NPL4YBR170C AAR2P32357 355 aaPredicted RBP5.43□□□□□ -1.54
NPL4YBR170C NAB3P38996 802 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
NPL4YBR170C SIT1P39980 628 aa5.43□□□□□ -1.54
NPL4YBR170C LEM3P42838 414 aa5.43□□□□□ -1.54
NPL4YBR170C FAP7Q12055 197 aaPredicted RBP5.43□□□□□ -1.54
NPL4YBR170C YPR071WQ12346 211 aa5.43□□□□□ -1.54
NPL4YBR170C PTC5Q12511 572 aa5.43□□□□□ -1.54
NPL4YBR170C TMA7Q3E764 64 aaKnown RBP5.43□□□□□ -1.54
NPL4YBR170C RAD53P22216 821 aa5.43□□□□□ -1.54
NPL4YBR170C RNQ1P25367 405 aa5.43□□□□□ -1.54
NPL4YBR170C PWP2P25635 923 aaKnown RBP5.43□□□□□ -1.54
NPL4YBR170C SCT1P32784 759 aa5.43□□□□□ -1.54
NPL4YBR170C VPS24P36095 224 aaKnown RBP5.43□□□□□ -1.54
NPL4YBR170C MGS1P40151 587 aa5.43□□□□□ -1.54
NPL4YBR170C GCV1P48015 400 aa5.43□□□□□ -1.54
NPL4YBR170C SPO71Q03868 1245 aa5.43□□□□□ -1.54
NPL4YBR170C KAR1P11927 433 aa5.42□□□□□ -1.54
NPL4YBR170C ALG2P43636 503 aa5.42□□□□□ -1.54
NPL4YBR170C COG6P53959 839 aa5.42□□□□□ -1.54
NPL4YBR170C SND1Q04007 877 aa5.42□□□□□ -1.54
NPL4YBR170C SPP382Q06411 708 aaPredicted RBP5.42□□□□□ -1.54
NPL4YBR170C TYS1P36421 394 aaKnown RBP5.41□□□□□ -1.54
NPL4YBR170C BAP2P38084 609 aa5.41□□□□□ -1.54
NPL4YBR170C FUI1P38196 639 aa5.41□□□□□ -1.54
NPL4YBR170C YBR071WP38243 211 aa5.41□□□□□ -1.54
NPL4YBR170C REI1P38344 393 aaPredicted RBP5.41□□□□□ -1.54
NPL4YBR170C PNT1P38969 423 aa5.41□□□□□ -1.54
NPL4YBR170C DUS3Q06053 668 aaKnown RBP5.41□□□□□ -1.54
NPL4YBR170C CDC9P04819 755 aa5.4□□□□□ -1.54
NPL4YBR170C PHR1P05066 565 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
NPL4YBR170C EUG1P32474 517 aa5.4□□□□□ -1.54
NPL4YBR170C YAR028WP39548 234 aa5.4□□□□□ -1.54
NPL4YBR170C GPP1P41277 250 aaKnown RBP5.4□□□□□ -1.54
NPL4YBR170C BUL2Q03758 920 aaKnown RBP5.4□□□□□ -1.54
NPL4YBR170C LAP2Q10740 671 aa5.4□□□□□ -1.54
NPL4YBR170C SRD1P09007 221 aa5.4□□□□□ -1.55
NPL4YBR170C YER152CP10356 443 aa5.4□□□□□ -1.55
NPL4YBR170C PPH3P32345 308 aa5.4□□□□□ -1.55
NPL4YBR170C SAH1P39954 449 aaKnown RBP5.4□□□□□ -1.55
NPL4YBR170C CEF1Q03654 590 aaPredicted RBP5.4□□□□□ -1.55
NPL4YBR170C ECM16Q04217 1267 aaKnown RBP5.4□□□□□ -1.55
NPL4YBR170C ATP4P05626 244 aa5.39□□□□□ -1.55
NPL4YBR170C DBP2P24783 546 aaKnown RBP5.39□□□□□ -1.55
NPL4YBR170C SPC29P33419 253 aa5.39□□□□□ -1.55
NPL4YBR170C MAE1P36013 669 aaKnown RBP5.39□□□□□ -1.55
NPL4YBR170C DAS1P47005 663 aa5.39□□□□□ -1.55
NPL4YBR170C VPS53P47061 822 aa5.39□□□□□ -1.55
NPL4YBR170C TGL2P54857 326 aa5.39□□□□□ -1.55
NPL4YBR170C MTQ2Q03920 221 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms