RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W AOS1Q06624 347 aa5.62□□□□□ -1.51
CDC28YBR160W SAC7P17121 654 aa5.61□□□□□ -1.51
CDC28YBR160W PGM1P33401 570 aaKnown RBP5.61□□□□□ -1.51
CDC28YBR160W TAT1P38085 619 aa5.61□□□□□ -1.51
CDC28YBR160W YIL177CP40434 1758 aa5.61□□□□□ -1.51
CDC28YBR160W NEO1P40527 1151 aa5.61□□□□□ -1.51
CDC28YBR160W YJL225CP40889 1758 aa5.61□□□□□ -1.51
CDC28YBR160W ARI1P53111 347 aaKnown RBP5.61□□□□□ -1.51
CDC28YBR160W YGL081WP53156 320 aa5.61□□□□□ -1.51
CDC28YBR160W NSE3Q05541 303 aa5.61□□□□□ -1.51
CDC28YBR160W JIP5Q06214 492 aaPredicted RBP5.61□□□□□ -1.51
CDC28YBR160W YDR306CQ06640 478 aa5.61□□□□□ -1.51
CDC28YBR160W YOL057WQ08225 711 aa5.61□□□□□ -1.51
CDC28YBR160W RPL19AP0CX82 189 aaKnown RBP5.6□□□□□ -1.51
CDC28YBR160W RPL19BP0CX83 189 aaPredicted RBP5.6□□□□□ -1.51
CDC28YBR160W DID4P36108 232 aa5.6□□□□□ -1.51
CDC28YBR160W AAP1P37898 856 aaKnown RBP5.6□□□□□ -1.51
CDC28YBR160W NPR3P38742 1146 aa5.6□□□□□ -1.51
CDC28YBR160W CIC1P38779 376 aaKnown RBP5.6□□□□□ -1.51
CDC28YBR160W PEX14P53112 341 aa5.6□□□□□ -1.51
CDC28YBR160W DSE4P53753 1117 aa5.6□□□□□ -1.51
CDC28YBR160W VPS60Q03390 229 aa5.6□□□□□ -1.51
CDC28YBR160W ELG1Q12050 791 aa5.6□□□□□ -1.51
CDC28YBR160W SFI1Q12369 946 aa5.6□□□□□ -1.51
CDC28YBR160W NOP14Q99207 810 aaKnown RBP5.6□□□□□ -1.51
CDC28YBR160W TY4B-HP0C2J7 1802 aa5.6□□□□□ -1.51
CDC28YBR160W TY4B-JP47024 1803 aa5.6□□□□□ -1.51
CDC28YBR160W MRP7P12687 371 aa5.59□□□□□ -1.51
CDC28YBR160W TPM1P17536 199 aaKnown RBP5.59□□□□□ -1.51
CDC28YBR160W VPS35P34110 944 aa5.59□□□□□ -1.51
CDC28YBR160W PRX1P34227 261 aaKnown RBP5.59□□□□□ -1.51
CDC28YBR160W ECM2P38241 364 aaKnown RBP5.59□□□□□ -1.51
CDC28YBR160W RAD26P40352 1085 aa5.59□□□□□ -1.51
CDC28YBR160W SPO22P40511 975 aa5.59□□□□□ -1.51
CDC28YBR160W YAF9P53930 226 aa5.59□□□□□ -1.51
CDC28YBR160W TOS4Q06266 489 aa5.59□□□□□ -1.51
CDC28YBR160W PMT7Q06644 662 aa5.59□□□□□ -1.51
CDC28YBR160W YIG1Q08956 461 aa5.59□□□□□ -1.51
CDC28YBR160W URB1P34241 1764 aaKnown RBP5.59□□□□□ -1.51
CDC28YBR160W FKS3Q04952 1785 aa5.58□□□□□ -1.52
CDC28YBR160W HTS1P07263 546 aaKnown RBP5.58□□□□□ -1.52
CDC28YBR160W PET111P08468 800 aa5.58□□□□□ -1.52
CDC28YBR160W ERS1P17261 260 aa5.58□□□□□ -1.52
CDC28YBR160W MBR1P23493 339 aa5.58□□□□□ -1.52
CDC28YBR160W HSP104P31539 908 aaKnown RBP5.58□□□□□ -1.52
CDC28YBR160W GCD6P32501 712 aaKnown RBP5.58□□□□□ -1.52
CDC28YBR160W ECM21P38167 1117 aaKnown RBP5.58□□□□□ -1.52
CDC28YBR160W DAK2P43550 591 aa5.58□□□□□ -1.52
CDC28YBR160W YGR122WP53272 402 aa5.58□□□□□ -1.52
CDC28YBR160W TIM50Q02776 476 aa5.58□□□□□ -1.52
CDC28YBR160W YPL034WQ03083 165 aa5.58□□□□□ -1.52
CDC28YBR160W YCS4Q06156 1176 aa5.58□□□□□ -1.52
CDC28YBR160W RIM20Q12033 661 aa5.58□□□□□ -1.52
CDC28YBR160W DDP1Q99321 188 aaKnown RBP5.58□□□□□ -1.52
CDC28YBR160W FRS2P15625 503 aaKnown RBP5.57□□□□□ -1.52
CDC28YBR160W RPT1P33299 467 aaKnown RBP5.57□□□□□ -1.52
CDC28YBR160W RIX1P38883 763 aaPredicted RBP5.57□□□□□ -1.52
CDC28YBR160W YJR107WP47145 328 aa5.57□□□□□ -1.52
CDC28YBR160W MON1P53129 644 aa5.57□□□□□ -1.52
CDC28YBR160W NCE103P53615 221 aa5.57□□□□□ -1.52
CDC28YBR160W FPR4Q06205 392 aaPredicted RBP5.57□□□□□ -1.52
CDC28YBR160W BRE1Q07457 700 aaKnown RBP5.57□□□□□ -1.52
CDC28YBR160W YPL150WQ12152 901 aa5.57□□□□□ -1.52
CDC28YBR160W REC8Q12188 680 aa5.57□□□□□ -1.52
CDC28YBR160W KCC4P25389 1037 aa5.56□□□□□ -1.52
CDC28YBR160W MRC1P25588 1096 aa5.56□□□□□ -1.52
CDC28YBR160W MAE1P36013 669 aaKnown RBP5.56□□□□□ -1.52
CDC28YBR160W YJR008WP47085 338 aa5.56□□□□□ -1.52
CDC28YBR160W NNF1P47149 201 aa5.56□□□□□ -1.52
CDC28YBR160W SSL2Q00578 843 aa5.56□□□□□ -1.52
CDC28YBR160W PSK2Q08217 1101 aa5.56□□□□□ -1.52
CDC28YBR160W NCB2Q92317 146 aa5.56□□□□□ -1.52
CDC28YBR160W PDR18P53756 1333 aa5.55□□□□□ -1.52
CDC28YBR160W SES1P07284 462 aaKnown RBP5.55□□□□□ -1.52
CDC28YBR160W TY1A-LR4P0C2I8 440 aaKnown RBP5.55□□□□□ -1.52
CDC28YBR160W TY1A-DR6P0CX70 440 aa5.55□□□□□ -1.52
CDC28YBR160W TY1A-ER1P0CX71 440 aa5.55□□□□□ -1.52
CDC28YBR160W TY1A-LR2P0CX72 440 aa5.55□□□□□ -1.52
CDC28YBR160W TY1A-PLP0CX73 440 aa5.55□□□□□ -1.52
CDC28YBR160W TY1A-JR1P0CX74 440 aa5.55□□□□□ -1.52
CDC28YBR160W TY1A-LR3P0CX75 440 aa5.55□□□□□ -1.52
CDC28YBR160W TY1A-ML2P0CX76 440 aa5.55□□□□□ -1.52
CDC28YBR160W RSC6P25632 483 aa5.55□□□□□ -1.52
CDC28YBR160W SPC110P32380 944 aa5.55□□□□□ -1.52
CDC28YBR160W PRP40P33203 583 aaKnown RBP5.55□□□□□ -1.52
CDC28YBR160W GCV1P48015 400 aa5.55□□□□□ -1.52
CDC28YBR160W MAK10Q02197 733 aa5.55□□□□□ -1.52
CDC28YBR160W TY1A-GR1Q12085 440 aa5.55□□□□□ -1.52
CDC28YBR160W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.55□□□□□ -1.52
CDC28YBR160W TY1A-OLQ92392 440 aaKnown RBP5.55□□□□□ -1.52
CDC28YBR160W CPA2P03965 1118 aaKnown RBP5.54□□□□□ -1.52
CDC28YBR160W RAD4P14736 754 aa5.54□□□□□ -1.52
CDC28YBR160W PEP7P32609 515 aa5.54□□□□□ -1.52
CDC28YBR160W UGA4P32837 571 aa5.54□□□□□ -1.52
CDC28YBR160W YPT11P48559 417 aa5.54□□□□□ -1.52
CDC28YBR160W CTF18P49956 741 aa5.54□□□□□ -1.52
CDC28YBR160W MLC1P53141 149 aa5.54□□□□□ -1.52
CDC28YBR160W MRPS35P53292 345 aa5.54□□□□□ -1.52
CDC28YBR160W DNM1P54861 757 aa5.54□□□□□ -1.52
CDC28YBR160W MRS2Q01926 470 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms