RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	SEC16B	Q96JE7	1060 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	APBA2	Q99767	749 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	MKNK1	Q9BUB5	465 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	QTRT2	Q9H974	415 aa	Known RBP	3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	ZRANB1	Q9UGI0	708 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	CHIC2	Q9UKJ5	165 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	R3HCC1	Q9Y3T6	440 aa	Known RBP	3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	GPSM3	Q9Y4H4	160 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	EID1	Q9Y6B2	187 aa		3.36	□□□□□ -1.87
GABRB3-223	ENST00000637293	CCER2	I3L3R5	266 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	IFRD1	O00458	451 aa	Predicted RBP	3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	RGS20	O76081	388 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	LDHA	P00338	332 aa	Known RBP	3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	MYL1	P05976	194 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	CD53	P19397	219 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	WEE1	P30291	646 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	SLC4A3	P48751	1232 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	RACK1	P63244	317 aa	Known RBP	3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	GTF2I	P78347	998 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	EXOSC10	Q01780	885 aa	Known RBP	3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	PTK2	Q05397	1052 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	DHX8	Q14562	1220 aa	Known RBP	3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	MAP9	Q49MG5	647 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	ZNF280D	Q6N043	979 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	CNPY4	Q8N129	248 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	PHTF2	Q8N3S3	785 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	PAF1	Q8N7H5	531 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	PDCD7	Q8N8D1	485 aa	Known RBP	3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	ZDHHC16	Q969W1	377 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	IL17RA	Q96F46	866 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	IER2	Q9BTL4	223 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	FANCL	Q9NW38	375 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	SFMBT1	Q9UHJ3	866 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	GGT7	Q9UJ14	662 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	STRIP2	Q9ULQ0	834 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	TTF2	Q9UNY4	1162 aa	Known RBP	3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	SPG7	Q9UQ90	795 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	PCDHGB7	Q9Y5F8	929 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293	AK5	Q9Y6K8	562 aa		3.35	□□□□□ -1.87
GABRB3-223	ENST00000637293		M0R2N6	131 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	ZBTB7B	O15156	539 aa	Predicted RBP	3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	NPHP1	O15259	732 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	PER1	O15534	1290 aa	Predicted RBP	3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	FOXO3	O43524	673 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	DKK1	O94907	266 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	FOS	P01100	380 aa	Predicted RBP	3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	PTMA	P06454	111 aa	Known RBP	3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	BDNF	P23560	247 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	GNAL	P38405	381 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	EPHB1	P54762	984 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	GYS2	P54840	703 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	PPP4C	P60510	307 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	GUCA2A	Q02747	115 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	PAK2	Q13177	524 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	PPP4R4	Q6NUP7	873 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	TRAF7	Q6Q0C0	670 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	NUDT18	Q6ZVK8	323 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	RETREG3	Q86VR2	466 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	WDR75	Q8IWA0	830 aa	Known RBP	3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	CACTIN-AS1	Q8N1I8	211 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	TPCN2	Q8NHX9	752 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	DEPDC7	Q96QD5	511 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	FAM129B	Q96TA1	746 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	MPHOSPH6	Q99547	160 aa	Known RBP	3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	FEZ1	Q99689	392 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	ZNF700	Q9H0M5	742 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	TMX4	Q9H1E5	349 aa	Predicted RBP	3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	OCEL1	Q9H607	264 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	SRA1	Q9HD15	236 aa	Known RBP	3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	NEUROD4	Q9HD90	331 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	TRIM35	Q9UPQ4	493 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	DOLK	Q9UPQ8	538 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	PCDHB9	Q9Y5E1	797 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	SCIN	Q9Y6U3	715 aa		3.34	□□□□□ -1.87
GABRB3-223	ENST00000637293	PNMA6F	A0A0J9YX94	578 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	SFI1	A8K8P3	1242 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	ALG1L2	C9J202	215 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	EIF4B	P23588	611 aa	Known RBP	3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	MPST	P25325	297 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	COPB2	P35606	906 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	USP5	P45974	858 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	MASP1	P48740	699 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	EVA1C	P58658	441 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	LMOD3	Q0VAK6	560 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	FKBP5	Q13451	457 aa	Predicted RBP	3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	RAPGEF1	Q13905	1077 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	RAB33A	Q14088	237 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	MYBPC2	Q14324	1141 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	AXDND1	Q5T1B0	1012 aa	Predicted RBP	3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	L1TD1	Q5T7N2	865 aa	Known RBP	3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	LYPD8	Q6UX82	237 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	MAMSTR	Q6ZN01	415 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	C16orf86	Q6ZW13	317 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	ANKS3	Q6ZW76	656 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	KRT26	Q7Z3Y9	468 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	PACS2	Q86VP3	889 aa		3.33	□□□□□ -1.88
GABRB3-223	ENST00000637293	SYNPO	Q8N3V7	929 aa		3.33	□□□□□ -1.88

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