RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 AMIGO3Q86WK7 504 aa10.8□□□□□ -0.68
MECP2-220ENST00000631210 NBPF15Q8N660 670 aa10.8□□□□□ -0.68
MECP2-220ENST00000631210 NUP188Q5SRE5 1749 aa10.8□□□□□ -0.68
MECP2-220ENST00000631210 C4BP0C0L5 1744 aa10.79□□□□□ -0.68
MECP2-220ENST00000631210 ATP6V1AP38606 617 aa10.79□□□□□ -0.68
MECP2-220ENST00000631210 CCDC125Q86Z20 511 aa10.79□□□□□ -0.68
MECP2-220ENST00000631210 SOS1Q07889 1333 aaPredicted RBP10.79□□□□□ -0.68
MECP2-220ENST00000631210 PROSER3Q2NL68 480 aa10.78□□□□□ -0.68
MECP2-220ENST00000631210 SLC27A3Q5K4L6 730 aa10.78□□□□□ -0.68
MECP2-220ENST00000631210 CCNL1Q9UK58 526 aaPredicted RBP10.78□□□□□ -0.68
MECP2-220ENST00000631210 TUBGCP6Q96RT7 1819 aa10.77□□□□□ -0.68
MECP2-220ENST00000631210 UBR3Q6ZT12 1888 aa10.77□□□□□ -0.69
MECP2-220ENST00000631210 A1BGP04217 495 aa10.77□□□□□ -0.69
MECP2-220ENST00000631210 PIP4K2AP48426 406 aaPredicted RBP10.77□□□□□ -0.69
MECP2-220ENST00000631210 RARSP54136 660 aaKnown RBP10.77□□□□□ -0.69
MECP2-220ENST00000631210 SSH1Q8WYL5 1049 aa10.77□□□□□ -0.69
MECP2-220ENST00000631210 TCERG1O14776 1098 aaKnown RBP10.76□□□□□ -0.69
MECP2-220ENST00000631210 ANXA1P04083 346 aa10.76□□□□□ -0.69
MECP2-220ENST00000631210 CT47B1P0C2W7 299 aaPredicted RBP10.76□□□□□ -0.69
MECP2-220ENST00000631210 EIF2S2P20042 333 aaKnown RBP10.76□□□□□ -0.69
MECP2-220ENST00000631210 CRKLP46109 303 aaKnown RBP10.76□□□□□ -0.69
MECP2-220ENST00000631210 BAG6P46379 1132 aa10.76□□□□□ -0.69
MECP2-220ENST00000631210 ZNF827Q17R98 1081 aa10.76□□□□□ -0.69
MECP2-220ENST00000631210 RC3H1Q5TC82 1133 aaKnown RBP10.76□□□□□ -0.69
MECP2-220ENST00000631210 SMIM5Q71RC9 77 aa10.76□□□□□ -0.69
MECP2-220ENST00000631210 NECTIN2Q92692 538 aa10.76□□□□□ -0.69
MECP2-220ENST00000631210 AKT1S1Q96B36 256 aa10.76□□□□□ -0.69
MECP2-220ENST00000631210 TEX13AQ9BXU3 409 aaPredicted RBP10.76□□□□□ -0.69
MECP2-220ENST00000631210 ANO8Q9HCE9 1232 aaPredicted RBP10.76□□□□□ -0.69
MECP2-220ENST00000631210 ZBTB1Q9Y2K1 713 aa10.76□□□□□ -0.69
MECP2-220ENST00000631210 CNTNAP4Q9C0A0 1308 aa10.76□□□□□ -0.69
MECP2-220ENST00000631210 BRPF1P55201 1214 aaPredicted RBP10.75□□□□□ -0.69
MECP2-220ENST00000631210 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
MECP2-220ENST00000631210 G2E3Q7L622 706 aa10.75□□□□□ -0.69
MECP2-220ENST00000631210 MRPL50Q8N5N7 158 aaKnown RBP10.75□□□□□ -0.69
MECP2-220ENST00000631210 CHPF2Q9P2E5 772 aa10.75□□□□□ -0.69
MECP2-220ENST00000631210 CACNA1FO60840 1977 aa10.75□□□□□ -0.69
MECP2-220ENST00000631210 BCAR3O75815 825 aa10.74□□□□□ -0.69
MECP2-220ENST00000631210 STARD3NLO95772 234 aa10.74□□□□□ -0.69
MECP2-220ENST00000631210 EIF5P55010 431 aaKnown RBP10.74□□□□□ -0.69
MECP2-220ENST00000631210 DDX21Q9NR30 783 aaKnown RBP eCLIP10.74□□□□□ -0.69
MECP2-220ENST00000631210 CCDC87Q9NVE4 849 aa10.74□□□□□ -0.69
MECP2-220ENST00000631210 ERBB4Q15303 1308 aa10.74□□□□□ -0.69
MECP2-220ENST00000631210 RPS6KA4O75676 772 aa10.73□□□□□ -0.69
MECP2-220ENST00000631210 SF3B2Q13435 895 aaKnown RBP10.73□□□□□ -0.69
MECP2-220ENST00000631210 ALDH1L2Q3SY69 923 aa10.73□□□□□ -0.69
MECP2-220ENST00000631210 CCDC30Q5VVM6 783 aa10.73□□□□□ -0.69
MECP2-220ENST00000631210 ZNF428Q96B54 188 aa10.73□□□□□ -0.69
MECP2-220ENST00000631210 BCL2L13Q9BXK5 485 aa10.73□□□□□ -0.69
MECP2-220ENST00000631210 PHAXQ9H814 394 aaKnown RBP10.73□□□□□ -0.69
MECP2-220ENST00000631210 C4AP0C0L4 1744 aa10.72□□□□□ -0.69
MECP2-220ENST00000631210 QSER1Q2KHR3 1735 aa10.72□□□□□ -0.69
MECP2-220ENST00000631210 IL6STP40189 918 aaPredicted RBP10.72□□□□□ -0.69
MECP2-220ENST00000631210 DBF4Q9UBU7 674 aaPredicted RBP10.72□□□□□ -0.69
MECP2-220ENST00000631210 RCAN3Q9UKA8 241 aa10.72□□□□□ -0.69
MECP2-220ENST00000631210 SOCS7O14512 581 aa10.71□□□□□ -0.69
MECP2-220ENST00000631210 SLC4A2P04920 1241 aa10.71□□□□□ -0.69
MECP2-220ENST00000631210 MYL6BP14649 208 aa10.71□□□□□ -0.69
MECP2-220ENST00000631210 CANXP27824 592 aaKnown RBP10.71□□□□□ -0.69
MECP2-220ENST00000631210 RNF123Q5XPI4 1314 aa10.71□□□□□ -0.69
MECP2-220ENST00000631210 TTLL7Q6ZT98 887 aa10.71□□□□□ -0.69
MECP2-220ENST00000631210 TNNQ9UQP3 1299 aa10.71□□□□□ -0.69
MECP2-220ENST00000631210 BCORQ6W2J9 1755 aa10.7□□□□□ -0.7
MECP2-220ENST00000631210 ADCY9O60503 1353 aa10.7□□□□□ -0.7
MECP2-220ENST00000631210 COL15A1P39059 1388 aa10.7□□□□□ -0.7
MECP2-220ENST00000631210 PNPLA7Q6ZV29 1317 aa10.7□□□□□ -0.7
MECP2-220ENST00000631210 GNPATO15228 680 aa10.7□□□□□ -0.7
MECP2-220ENST00000631210 SLC15A2Q16348 729 aa10.7□□□□□ -0.7
MECP2-220ENST00000631210 COPS6Q7L5N1 327 aa10.7□□□□□ -0.7
MECP2-220ENST00000631210 XAGE3Q8WTP9 111 aa10.7□□□□□ -0.7
MECP2-220ENST00000631210 BCL2L12Q9HB09 334 aa10.7□□□□□ -0.7
MECP2-220ENST00000631210 HYPKQ9NX55 129 aa10.7□□□□□ -0.7
MECP2-220ENST00000631210 CAMTA2O94983 1202 aa10.69□□□□□ -0.7
MECP2-220ENST00000631210 FLIIQ13045 1269 aa10.69□□□□□ -0.7
MECP2-220ENST00000631210 COL23A1Q86Y22 540 aaPredicted RBP10.69□□□□□ -0.7
MECP2-220ENST00000631210 ARHGEF1Q92888 912 aaKnown RBP10.69□□□□□ -0.7
MECP2-220ENST00000631210 PDGFDQ9GZP0 370 aaPredicted RBP10.69□□□□□ -0.7
MECP2-220ENST00000631210 SMC4Q9NTJ3 1288 aa10.69□□□□□ -0.7
MECP2-220ENST00000631210 ARFGEF2Q9Y6D5 1785 aa10.69□□□□□ -0.7
MECP2-220ENST00000631210 SCN7AQ01118 1682 aa10.69□□□□□ -0.7
MECP2-220ENST00000631210 CASZ1Q86V15 1759 aa10.68□□□□□ -0.7
MECP2-220ENST00000631210 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.68□□□□□ -0.7
MECP2-220ENST00000631210 SSFA2P28290 1259 aa10.68□□□□□ -0.7
MECP2-220ENST00000631210 AK7Q96M32 723 aa10.68□□□□□ -0.7
MECP2-220ENST00000631210 NOB1Q9ULX3 412 aaKnown RBP10.68□□□□□ -0.7
MECP2-220ENST00000631210 RTCBQ9Y3I0 505 aaKnown RBP10.68□□□□□ -0.7
MECP2-220ENST00000631210 NUP98P52948 1817 aa10.68□□□□□ -0.7
MECP2-220ENST00000631210 USP42Q9H9J4 1324 aaKnown RBP10.67□□□□□ -0.7
MECP2-220ENST00000631210 AIMP1Q12904 312 aaKnown RBP10.67□□□□□ -0.7
MECP2-220ENST00000631210 HLFQ16534 295 aa10.67□□□□□ -0.7
MECP2-220ENST00000631210 STK31Q9BXU1 1019 aa10.67□□□□□ -0.7
MECP2-220ENST00000631210 SRP68Q9UHB9 627 aaKnown RBP10.67□□□□□ -0.7
MECP2-220ENST00000631210 TBC1D2BQ9UPU7 963 aa10.67□□□□□ -0.7
MECP2-220ENST00000631210 MAP3K15Q6ZN16 1313 aa10.66□□□□□ -0.7
MECP2-220ENST00000631210 F6X3S4 739 aa10.66□□□□□ -0.7
MECP2-220ENST00000631210 PLIN1O60240 522 aa10.66□□□□□ -0.7
MECP2-220ENST00000631210 PHF14O94880 888 aa10.66□□□□□ -0.7
MECP2-220ENST00000631210 RLBP1P12271 317 aa10.66□□□□□ -0.7
MECP2-220ENST00000631210 TRIM27P14373 513 aa10.66□□□□□ -0.7
MECP2-220ENST00000631210 ADRA2BP18089 450 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms