RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 ADRA2BP18089 450 aa17.8■□□□□ 0.44
SOX2-OT-246ENST00000628343 EIF4A1P60842 406 aaKnown RBP17.8■□□□□ 0.44
SOX2-OT-246ENST00000628343 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
SOX2-OT-246ENST00000628343 MSL1Q68DK7 614 aa17.8■□□□□ 0.44
SOX2-OT-246ENST00000628343 ARHGEF1Q92888 912 aaKnown RBP17.8■□□□□ 0.44
SOX2-OT-246ENST00000628343 TEX13AQ9BXU3 409 aaPredicted RBP17.8■□□□□ 0.44
SOX2-OT-246ENST00000628343 TSPYL4Q9UJ04 414 aa17.8■□□□□ 0.44
SOX2-OT-246ENST00000628343 USP16Q9Y5T5 823 aa17.8■□□□□ 0.44
SOX2-OT-246ENST00000628343 SOS1Q07889 1333 aaPredicted RBP17.79■□□□□ 0.44
SOX2-OT-246ENST00000628343 SNRPA1P09661 255 aaKnown RBP17.79■□□□□ 0.44
SOX2-OT-246ENST00000628343 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
SOX2-OT-246ENST00000628343 BABAM1Q9NWV8 329 aa17.78■□□□□ 0.44
SOX2-OT-246ENST00000628343 CCER2I3L3R5 266 aa17.77■□□□□ 0.44
SOX2-OT-246ENST00000628343 CHL1O00533 1208 aa17.77■□□□□ 0.44
SOX2-OT-246ENST00000628343 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.44
SOX2-OT-246ENST00000628343 COL24A1Q17RW2 1714 aa17.76■□□□□ 0.43
SOX2-OT-246ENST00000628343 GIGYF1O75420 1035 aaPredicted RBP17.76■□□□□ 0.43
SOX2-OT-246ENST00000628343 A1BGP04217 495 aa17.76■□□□□ 0.43
SOX2-OT-246ENST00000628343 PPP1R1BQ9UD71 204 aaPredicted RBP17.76■□□□□ 0.43
SOX2-OT-246ENST00000628343 LAS1LQ9Y4W2 734 aaKnown RBP17.76■□□□□ 0.43
SOX2-OT-246ENST00000628343 COL15A1P39059 1388 aa17.76■□□□□ 0.43
SOX2-OT-246ENST00000628343 RFC4P35249 363 aa17.75■□□□□ 0.43
SOX2-OT-246ENST00000628343 CCDC27Q2M243 656 aa17.75■□□□□ 0.43
SOX2-OT-246ENST00000628343 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
SOX2-OT-246ENST00000628343 SRP68Q9UHB9 627 aaKnown RBP17.75■□□□□ 0.43
SOX2-OT-246ENST00000628343 USP42Q9H9J4 1324 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-246ENST00000628343 ZNF853P0CG23 659 aa17.74■□□□□ 0.43
SOX2-OT-246ENST00000628343 GYS1P13807 737 aa17.74■□□□□ 0.43
SOX2-OT-246ENST00000628343 POLD1P28340 1107 aa17.74■□□□□ 0.43
SOX2-OT-246ENST00000628343 PIP4K2AP48426 406 aaPredicted RBP17.74■□□□□ 0.43
SOX2-OT-246ENST00000628343 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-246ENST00000628343 ARXQ96QS3 562 aa17.74■□□□□ 0.43
SOX2-OT-246ENST00000628343 C4AP0C0L4 1744 aa17.74■□□□□ 0.43
SOX2-OT-246ENST00000628343 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
SOX2-OT-246ENST00000628343 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
SOX2-OT-246ENST00000628343 MIER1Q8N108 512 aa17.73■□□□□ 0.43
SOX2-OT-246ENST00000628343 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
SOX2-OT-246ENST00000628343 IFT57Q9NWB7 429 aa17.73■□□□□ 0.43
SOX2-OT-246ENST00000628343 IL6STP40189 918 aaPredicted RBP17.72■□□□□ 0.43
SOX2-OT-246ENST00000628343 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
SOX2-OT-246ENST00000628343 KRT24Q2M2I5 525 aa17.72■□□□□ 0.43
SOX2-OT-246ENST00000628343 NBPF26B4DH59 902 aa17.71■□□□□ 0.43
SOX2-OT-246ENST00000628343 NBPF10Q6P3W6 841 aaKnown RBP17.71■□□□□ 0.43
SOX2-OT-246ENST00000628343 NBPF15Q8N660 670 aa17.71■□□□□ 0.43
SOX2-OT-246ENST00000628343 ZNF330Q9Y3S2 320 aaPredicted RBP17.71■□□□□ 0.43
SOX2-OT-246ENST00000628343 SALL2Q9Y467 1007 aaPredicted RBP17.71■□□□□ 0.43
SOX2-OT-246ENST00000628343 LAMB4A4D0S4 1761 aa17.71■□□□□ 0.43
SOX2-OT-246ENST00000628343 GNAI1P63096 354 aa17.7■□□□□ 0.42
SOX2-OT-246ENST00000628343 FKBP8Q14318 412 aa17.7■□□□□ 0.42
SOX2-OT-246ENST00000628343 USPL1Q5W0Q7 1092 aa17.7■□□□□ 0.42
SOX2-OT-246ENST00000628343 FHDC1Q9C0D6 1143 aaPredicted RBP17.7■□□□□ 0.42
SOX2-OT-246ENST00000628343 NARFQ9UHQ1 456 aa17.7■□□□□ 0.42
SOX2-OT-246ENST00000628343 ZPR1O75312 459 aa17.69■□□□□ 0.42
SOX2-OT-246ENST00000628343 MMP10P09238 476 aa17.69■□□□□ 0.42
SOX2-OT-246ENST00000628343 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
SOX2-OT-246ENST00000628343 BCL2L12Q9HB09 334 aa17.69■□□□□ 0.42
SOX2-OT-246ENST00000628343 A0A087WZG4 1122 aa17.68■□□□□ 0.42
SOX2-OT-246ENST00000628343 TBC1D2BQ9UPU7 963 aa17.67■□□□□ 0.42
SOX2-OT-246ENST00000628343 IL16Q14005 1332 aa17.67■□□□□ 0.42
SOX2-OT-246ENST00000628343 CAMTA2O94983 1202 aa17.66■□□□□ 0.42
SOX2-OT-246ENST00000628343 EIF2S2P20042 333 aaKnown RBP17.66■□□□□ 0.42
SOX2-OT-246ENST00000628343 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
SOX2-OT-246ENST00000628343 SYT17Q9BSW7 474 aa17.66■□□□□ 0.42
SOX2-OT-246ENST00000628343 DDR1Q08345 913 aa17.65■□□□□ 0.42
SOX2-OT-246ENST00000628343 PDIA6Q15084 440 aa17.65■□□□□ 0.42
SOX2-OT-246ENST00000628343 DZIP3Q86Y13 1208 aaKnown RBP17.65■□□□□ 0.42
SOX2-OT-246ENST00000628343 NGEFQ8N5V2 710 aa17.65■□□□□ 0.42
SOX2-OT-246ENST00000628343 NECTIN2Q92692 538 aa17.65■□□□□ 0.42
SOX2-OT-246ENST00000628343 ERBB4Q15303 1308 aa17.65■□□□□ 0.42
SOX2-OT-246ENST00000628343 SCN7AQ01118 1682 aa17.64■□□□□ 0.42
SOX2-OT-246ENST00000628343 HOXB7P09629 217 aa17.64■□□□□ 0.41
SOX2-OT-246ENST00000628343 MYL6BP14649 208 aa17.64■□□□□ 0.41
SOX2-OT-246ENST00000628343 TM4SF1P30408 202 aa17.64■□□□□ 0.41
SOX2-OT-246ENST00000628343 PROSER3Q2NL68 480 aa17.64■□□□□ 0.41
SOX2-OT-246ENST00000628343 DUSP27Q5VZP5 1158 aa17.64■□□□□ 0.41
SOX2-OT-246ENST00000628343 LRP10Q7Z4F1 713 aa17.64■□□□□ 0.41
SOX2-OT-246ENST00000628343 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
SOX2-OT-246ENST00000628343 WDR63Q8IWG1 891 aa17.64■□□□□ 0.41
SOX2-OT-246ENST00000628343 KLHL34Q8N239 644 aa17.64■□□□□ 0.41
SOX2-OT-246ENST00000628343 NFIXQ14938 502 aa17.63■□□□□ 0.41
SOX2-OT-246ENST00000628343 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
SOX2-OT-246ENST00000628343 SPINK5Q9NQ38 1064 aaPredicted RBP17.63■□□□□ 0.41
SOX2-OT-246ENST00000628343 ZNF521Q96K83 1311 aa17.63■□□□□ 0.41
SOX2-OT-246ENST00000628343 POLRMTO00411 1230 aaKnown RBP17.62■□□□□ 0.41
SOX2-OT-246ENST00000628343 ANXA1P04083 346 aa17.62■□□□□ 0.41
SOX2-OT-246ENST00000628343 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
SOX2-OT-246ENST00000628343 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
SOX2-OT-246ENST00000628343 PARP3Q9Y6F1 533 aa17.62■□□□□ 0.41
SOX2-OT-246ENST00000628343 ELL2O00472 640 aaPredicted RBP17.61■□□□□ 0.41
SOX2-OT-246ENST00000628343 TBC1D9BQ66K14 1250 aa17.61■□□□□ 0.41
SOX2-OT-246ENST00000628343 TSPYL6Q8N831 410 aa17.61■□□□□ 0.41
SOX2-OT-246ENST00000628343 FANCIQ9NVI1 1328 aa17.61■□□□□ 0.41
SOX2-OT-246ENST00000628343 BICDL1Q6ZP65 573 aa17.6■□□□□ 0.41
SOX2-OT-246ENST00000628343 TTLL7Q6ZT98 887 aa17.6■□□□□ 0.41
SOX2-OT-246ENST00000628343 CHPF2Q9P2E5 772 aa17.6■□□□□ 0.41
SOX2-OT-246ENST00000628343 CD2APQ9Y5K6 639 aa17.6■□□□□ 0.41
SOX2-OT-246ENST00000628343 C10orf71Q711Q0 1435 aa17.6■□□□□ 0.41
SOX2-OT-246ENST00000628343 BCORQ6W2J9 1755 aa17.6■□□□□ 0.41
SOX2-OT-246ENST00000628343 DDX21Q9NR30 783 aaKnown RBP eCLIP17.59■□□□□ 0.41
SOX2-OT-246ENST00000628343 HLFQ16534 295 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms