RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 ARID4AP29374 1257 aaPredicted RBP6.88□□□□□ -1.31
ATRX-209ENST00000623242 RNF144AP50876 292 aaPredicted RBP6.88□□□□□ -1.31
ATRX-209ENST00000623242 C6orf118Q5T5N4 469 aa6.88□□□□□ -1.31
ATRX-209ENST00000623242 POTEAQ6S8J7 498 aa6.88□□□□□ -1.31
ATRX-209ENST00000623242 PPARGC1BQ86YN6 1023 aaKnown RBP6.88□□□□□ -1.31
ATRX-209ENST00000623242 CHMP7Q8WUX9 453 aaPredicted RBP6.88□□□□□ -1.31
ATRX-209ENST00000623242 C2orf49Q9BVC5 232 aaPredicted RBP6.88□□□□□ -1.31
ATRX-209ENST00000623242 PATL2C9JE40 543 aaKnown RBP6.87□□□□□ -1.31
ATRX-209ENST00000623242 GPC1P35052 558 aa6.87□□□□□ -1.31
ATRX-209ENST00000623242 STAG2Q8N3U4 1231 aa6.87□□□□□ -1.31
ATRX-209ENST00000623242 RNF217Q8TC41 542 aa6.87□□□□□ -1.31
ATRX-209ENST00000623242 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
ATRX-209ENST00000623242 EML1O00423 815 aa6.86□□□□□ -1.31
ATRX-209ENST00000623242 BMP2P12643 396 aa6.86□□□□□ -1.31
ATRX-209ENST00000623242 PSMA6P60900 246 aaKnown RBP6.86□□□□□ -1.31
ATRX-209ENST00000623242 TEAD4Q15561 434 aa6.86□□□□□ -1.31
ATRX-209ENST00000623242 SENP2Q9HC62 589 aa6.86□□□□□ -1.31
ATRX-209ENST00000623242 POLMQ9NP87 494 aaPredicted RBP6.86□□□□□ -1.31
ATRX-209ENST00000623242 PARP3Q9Y6F1 533 aa6.86□□□□□ -1.31
ATRX-209ENST00000623242 NAA30Q147X3 362 aaPredicted RBP6.85□□□□□ -1.31
ATRX-209ENST00000623242 CCER1Q8TC90 406 aaPredicted RBP6.85□□□□□ -1.31
ATRX-209ENST00000623242 COL26A1Q96A83 441 aa6.85□□□□□ -1.31
ATRX-209ENST00000623242 SAP130Q9H0E3 1048 aa6.85□□□□□ -1.31
ATRX-209ENST00000623242 DNMT3AQ9Y6K1 912 aaPredicted RBP6.85□□□□□ -1.31
ATRX-209ENST00000623242 SOS2Q07890 1332 aaPredicted RBP6.84□□□□□ -1.31
ATRX-209ENST00000623242 SPATA31C2B4DYI2 1134 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 UPP2O95045 317 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 NOS2P35228 1153 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 HIRAP54198 1017 aaPredicted RBP6.84□□□□□ -1.31
ATRX-209ENST00000623242 ZNF211Q13398 564 aaPredicted RBP6.84□□□□□ -1.31
ATRX-209ENST00000623242 C4orf17Q53FE4 359 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 SLC27A3Q5K4L6 730 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 LCE2AQ5TA79 106 aaPredicted RBP6.84□□□□□ -1.31
ATRX-209ENST00000623242 TMEM214Q6NUQ4 689 aaKnown RBP6.84□□□□□ -1.31
ATRX-209ENST00000623242 NBPF15Q8N660 670 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 RHBDD1Q8TEB9 315 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 GTF3C2Q8WUA4 911 aaPredicted RBP6.84□□□□□ -1.31
ATRX-209ENST00000623242 KIFC2Q96AC6 838 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 TRIM47Q96LD4 638 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 ZFP42Q96MM3 310 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 QTRT2Q9H974 415 aaKnown RBP6.84□□□□□ -1.31
ATRX-209ENST00000623242 ANO2Q9NQ90 1003 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 CABP1Q9NZU7 370 aa6.84□□□□□ -1.31
ATRX-209ENST00000623242 SERTM1A2A2V5 107 aa6.83□□□□□ -1.32
ATRX-209ENST00000623242 SOWAHDA6NJG2 315 aa6.83□□□□□ -1.32
ATRX-209ENST00000623242 TTLL8A6PVC2 850 aa6.83□□□□□ -1.32
ATRX-209ENST00000623242 PTCD1O75127 700 aaKnown RBP6.83□□□□□ -1.32
ATRX-209ENST00000623242 SNRPBP14678 240 aaKnown RBP6.83□□□□□ -1.32
ATRX-209ENST00000623242 POU4F2Q12837 409 aa6.83□□□□□ -1.32
ATRX-209ENST00000623242 MTMR3Q13615 1198 aa6.83□□□□□ -1.32
ATRX-209ENST00000623242 ECM1Q16610 540 aa6.83□□□□□ -1.32
ATRX-209ENST00000623242 TREML4Q6UXN2 200 aa6.83□□□□□ -1.32
ATRX-209ENST00000623242 L3MBTL2Q969R5 705 aa6.83□□□□□ -1.32
ATRX-209ENST00000623242 NIFKQ9BYG3 293 aaKnown RBP6.83□□□□□ -1.32
ATRX-209ENST00000623242 HCN4Q9Y3Q4 1203 aa6.83□□□□□ -1.32
ATRX-209ENST00000623242 UNC13AQ9UPW8 1703 aa6.83□□□□□ -1.32
ATRX-209ENST00000623242 FIGNL2A6NMB9 653 aa6.82□□□□□ -1.32
ATRX-209ENST00000623242 ABL1P00519 1130 aa6.82□□□□□ -1.32
ATRX-209ENST00000623242 TXLNAP40222 546 aa6.82□□□□□ -1.32
ATRX-209ENST00000623242 PHKA2P46019 1235 aa6.82□□□□□ -1.32
ATRX-209ENST00000623242 COX20Q5RI15 118 aa6.82□□□□□ -1.32
ATRX-209ENST00000623242 SND1Q7KZF4 910 aaKnown RBP eCLIP6.82□□□□□ -1.32
ATRX-209ENST00000623242 PRICKLE2Q7Z3G6 844 aa6.82□□□□□ -1.32
ATRX-209ENST00000623242 C7orf43Q8WVR3 580 aa6.82□□□□□ -1.32
ATRX-209ENST00000623242 KLRG1Q96E93 195 aa6.82□□□□□ -1.32
ATRX-209ENST00000623242 LRFN2Q9ULH4 789 aa6.82□□□□□ -1.32
ATRX-209ENST00000623242 TNFRSF10BO14763 440 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 ICMTO60725 284 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 RHOQP17081 205 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 PLA2G4AP47712 749 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 SCARF1Q14162 830 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 FAM26DQ5JW98 314 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 GNASQ5JWF2 1037 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 NBPF10Q6P3W6 841 aaKnown RBP6.81□□□□□ -1.32
ATRX-209ENST00000623242 LYSMD3Q7Z3D4 306 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 NGLY1Q96IV0 654 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 EGFL7Q9UHF1 273 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 DNMT3LQ9UJW3 386 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 ZNF232Q9UNY5 417 aa6.81□□□□□ -1.32
ATRX-209ENST00000623242 WFS1O76024 890 aa6.8□□□□□ -1.32
ATRX-209ENST00000623242 C16orf46Q6P387 395 aa6.8□□□□□ -1.32
ATRX-209ENST00000623242 ALDH16A1Q8IZ83 802 aa6.8□□□□□ -1.32
ATRX-209ENST00000623242 HELQQ8TDG4 1101 aa6.8□□□□□ -1.32
ATRX-209ENST00000623242 VTI1AQ96AJ9 217 aa6.8□□□□□ -1.32
ATRX-209ENST00000623242 MYO19Q96H55 970 aa6.8□□□□□ -1.32
ATRX-209ENST00000623242 PHACTR1Q9C0D0 580 aa6.8□□□□□ -1.32
ATRX-209ENST00000623242 BICRAQ9NZM4 1560 aa6.8□□□□□ -1.32
ATRX-209ENST00000623242 MTMR7Q9Y216 660 aa6.8□□□□□ -1.32
ATRX-209ENST00000623242 H3BRB1 525 aa6.79□□□□□ -1.32
ATRX-209ENST00000623242 GTF2E1P29083 439 aaPredicted RBP6.79□□□□□ -1.32
ATRX-209ENST00000623242 TMCO4Q5TGY1 634 aa6.79□□□□□ -1.32
ATRX-209ENST00000623242 TUT1Q9H6E5 874 aaKnown RBP6.79□□□□□ -1.32
ATRX-209ENST00000623242 SOBPA7XYQ1 873 aa6.78□□□□□ -1.32
ATRX-209ENST00000623242 ATP4AP20648 1035 aa6.78□□□□□ -1.32
ATRX-209ENST00000623242 NFX1Q12986 1120 aaKnown RBP6.78□□□□□ -1.32
ATRX-209ENST00000623242 CHMP3Q9Y3E7 222 aa6.78□□□□□ -1.32
ATRX-209ENST00000623242 SENP3-EIF4A1A0A087X0R7 540 aa6.77□□□□□ -1.33
ATRX-209ENST00000623242 NPR3P17342 541 aa6.77□□□□□ -1.33
ATRX-209ENST00000623242 MFAP1P55081 439 aaKnown RBP6.77□□□□□ -1.33
ATRX-209ENST00000623242 ARHGAP4P98171 946 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms