RNA–Protein interactions for RNA: ENST00000622433.4

MECP2-213, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-213ENST00000622433 LAMB4A4D0S4 1761 aa17.59■□□□□ 0.41
MECP2-213ENST00000622433 GIGYF1O75420 1035 aaPredicted RBP17.59■□□□□ 0.41
MECP2-213ENST00000622433 ADRA2BP18089 450 aa17.59■□□□□ 0.41
MECP2-213ENST00000622433 INTS5Q6P9B9 1019 aaKnown RBP17.59■□□□□ 0.41
MECP2-213ENST00000622433 LAS1LQ9Y4W2 734 aaKnown RBP17.59■□□□□ 0.41
MECP2-213ENST00000622433 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
MECP2-213ENST00000622433 AMIGO3Q86WK7 504 aa17.58■□□□□ 0.4
MECP2-213ENST00000622433 SLC16A10Q8TF71 515 aa17.58■□□□□ 0.4
MECP2-213ENST00000622433 MBIPQ9NS73 344 aa17.58■□□□□ 0.4
MECP2-213ENST00000622433 RTCBQ9Y3I0 505 aaKnown RBP17.58■□□□□ 0.4
MECP2-213ENST00000622433 SALL2Q9Y467 1007 aaPredicted RBP17.58■□□□□ 0.4
MECP2-213ENST00000622433 COL23A1Q86Y22 540 aaPredicted RBP17.57■□□□□ 0.4
MECP2-213ENST00000622433 USP16Q9Y5T5 823 aa17.57■□□□□ 0.4
MECP2-213ENST00000622433 SOS1Q07889 1333 aaPredicted RBP17.56■□□□□ 0.4
MECP2-213ENST00000622433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.56■□□□□ 0.4
MECP2-213ENST00000622433 PRAMEF22A3QJZ6 481 aa17.56■□□□□ 0.4
MECP2-213ENST00000622433 PDGFDQ9GZP0 370 aaPredicted RBP17.56■□□□□ 0.4
MECP2-213ENST00000622433 ZBTB1Q9Y2K1 713 aa17.56■□□□□ 0.4
MECP2-213ENST00000622433 HOXB7P09629 217 aa17.55■□□□□ 0.4
MECP2-213ENST00000622433 PHF14O94880 888 aa17.54■□□□□ 0.4
MECP2-213ENST00000622433 TRAPPC3LQ5T215 181 aa17.54■□□□□ 0.4
MECP2-213ENST00000622433 MTFR1LQ9H019 292 aa17.54■□□□□ 0.4
MECP2-213ENST00000622433 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
MECP2-213ENST00000622433 A1BGP04217 495 aa17.53■□□□□ 0.4
MECP2-213ENST00000622433 IL6STP40189 918 aaPredicted RBP17.53■□□□□ 0.4
MECP2-213ENST00000622433 EIF5P55010 431 aaKnown RBP17.53■□□□□ 0.4
MECP2-213ENST00000622433 COL15A1P39059 1388 aa17.53■□□□□ 0.4
MECP2-213ENST00000622433 LRP5O75197 1615 aa17.52■□□□□ 0.4
MECP2-213ENST00000622433 CANXP27824 592 aaKnown RBP17.52■□□□□ 0.4
MECP2-213ENST00000622433 SMIM5Q71RC9 77 aa17.52■□□□□ 0.4
MECP2-213ENST00000622433 ARHGEF1Q92888 912 aaKnown RBP17.52■□□□□ 0.4
MECP2-213ENST00000622433 C4AP0C0L4 1744 aa17.52■□□□□ 0.39
MECP2-213ENST00000622433 COL24A1Q17RW2 1714 aa17.52■□□□□ 0.39
MECP2-213ENST00000622433 A0A087WZG4 1122 aa17.51■□□□□ 0.39
MECP2-213ENST00000622433 MSH5O43196 834 aa17.51■□□□□ 0.39
MECP2-213ENST00000622433 KRT24Q2M2I5 525 aa17.51■□□□□ 0.39
MECP2-213ENST00000622433 SPON1Q9HCB6 807 aa17.51■□□□□ 0.39
MECP2-213ENST00000622433 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
MECP2-213ENST00000622433 NBPF26B4DH59 902 aa17.5■□□□□ 0.39
MECP2-213ENST00000622433 ZBTB7AO95365 584 aa17.5■□□□□ 0.39
MECP2-213ENST00000622433 RFC4P35249 363 aa17.5■□□□□ 0.39
MECP2-213ENST00000622433 DUSP27Q5VZP5 1158 aa17.5■□□□□ 0.39
MECP2-213ENST00000622433 NBPF10Q6P3W6 841 aaKnown RBP17.5■□□□□ 0.39
MECP2-213ENST00000622433 NBPF15Q8N660 670 aa17.5■□□□□ 0.39
MECP2-213ENST00000622433 TSR2Q969E8 191 aaKnown RBP17.5■□□□□ 0.39
MECP2-213ENST00000622433 MYH16Q9H6N6 1097 aa17.5■□□□□ 0.39
MECP2-213ENST00000622433 GOLGA2Q08379 1002 aa17.49■□□□□ 0.39
MECP2-213ENST00000622433 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
MECP2-213ENST00000622433 USP42Q9H9J4 1324 aaKnown RBP17.48■□□□□ 0.39
MECP2-213ENST00000622433 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
MECP2-213ENST00000622433 CHMP4AQ9BY43 222 aa17.48■□□□□ 0.39
MECP2-213ENST00000622433 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
MECP2-213ENST00000622433 E9PSI1 815 aa17.47■□□□□ 0.39
MECP2-213ENST00000622433 EIF2S2P20042 333 aaKnown RBP17.47■□□□□ 0.39
MECP2-213ENST00000622433 HDGFL1Q5TGJ6 251 aa17.47■□□□□ 0.39
MECP2-213ENST00000622433 NPM2Q86SE8 214 aaKnown RBP17.47■□□□□ 0.39
MECP2-213ENST00000622433 SGIP1Q9BQI5 828 aa17.47■□□□□ 0.39
MECP2-213ENST00000622433 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
MECP2-213ENST00000622433 GYS1P13807 737 aa17.46■□□□□ 0.39
MECP2-213ENST00000622433 PTGER2P43116 358 aa17.46■□□□□ 0.39
MECP2-213ENST00000622433 PIP4K2AP48426 406 aaPredicted RBP17.46■□□□□ 0.39
MECP2-213ENST00000622433 PDIA6Q15084 440 aa17.46■□□□□ 0.39
MECP2-213ENST00000622433 SCN7AQ01118 1682 aa17.45■□□□□ 0.38
MECP2-213ENST00000622433 ZPR1O75312 459 aa17.45■□□□□ 0.38
MECP2-213ENST00000622433 HNRNPUQ00839 825 aaKnown RBP eCLIP17.45■□□□□ 0.38
MECP2-213ENST00000622433 SLFN5Q08AF3 891 aa17.45■□□□□ 0.38
MECP2-213ENST00000622433 NLGN1Q8N2Q7 840 aa17.45■□□□□ 0.38
MECP2-213ENST00000622433 DDX21Q9NR30 783 aaKnown RBP eCLIP17.45■□□□□ 0.38
MECP2-213ENST00000622433 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
MECP2-213ENST00000622433 RGL2O15211 777 aa17.44■□□□□ 0.38
MECP2-213ENST00000622433 POLD1P28340 1107 aa17.44■□□□□ 0.38
MECP2-213ENST00000622433 EXOSC9Q06265 439 aaKnown RBP17.44■□□□□ 0.38
MECP2-213ENST00000622433 TWISTNBQ3B726 338 aaPredicted RBP17.44■□□□□ 0.38
MECP2-213ENST00000622433 LRP10Q7Z4F1 713 aa17.44■□□□□ 0.38
MECP2-213ENST00000622433 TSPYL6Q8N831 410 aa17.44■□□□□ 0.38
MECP2-213ENST00000622433 ZNF330Q9Y3S2 320 aaPredicted RBP17.44■□□□□ 0.38
MECP2-213ENST00000622433 BCORQ6W2J9 1755 aa17.43■□□□□ 0.38
MECP2-213ENST00000622433 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
MECP2-213ENST00000622433 USPL1Q5W0Q7 1092 aa17.43■□□□□ 0.38
MECP2-213ENST00000622433 MSL1Q68DK7 614 aa17.43■□□□□ 0.38
MECP2-213ENST00000622433 DZIP3Q86Y13 1208 aaKnown RBP17.43■□□□□ 0.38
MECP2-213ENST00000622433 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
MECP2-213ENST00000622433 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
MECP2-213ENST00000622433 CAMTA2O94983 1202 aa17.42■□□□□ 0.38
MECP2-213ENST00000622433 MYL6BP14649 208 aa17.42■□□□□ 0.38
MECP2-213ENST00000622433 PROSER3Q2NL68 480 aa17.42■□□□□ 0.38
MECP2-213ENST00000622433 NECTIN2Q92692 538 aa17.42■□□□□ 0.38
MECP2-213ENST00000622433 BCL2L12Q9HB09 334 aa17.42■□□□□ 0.38
MECP2-213ENST00000622433 CHPF2Q9P2E5 772 aa17.42■□□□□ 0.38
MECP2-213ENST00000622433 TBC1D2BQ9UPU7 963 aa17.42■□□□□ 0.38
MECP2-213ENST00000622433 ZBED9Q6R2W3 1325 aa17.42■□□□□ 0.38
MECP2-213ENST00000622433 FKBP8Q14318 412 aa17.41■□□□□ 0.38
MECP2-213ENST00000622433 CCDC30Q5VVM6 783 aa17.41■□□□□ 0.38
MECP2-213ENST00000622433 CDCA7LQ96GN5 454 aa17.41■□□□□ 0.38
MECP2-213ENST00000622433 VAMP4O75379 141 aa17.4■□□□□ 0.38
MECP2-213ENST00000622433 ANXA1P04083 346 aa17.4■□□□□ 0.38
MECP2-213ENST00000622433 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
MECP2-213ENST00000622433 ERVV-1B6SEH8 477 aa17.39■□□□□ 0.37
MECP2-213ENST00000622433 MMP10P09238 476 aa17.39■□□□□ 0.37
MECP2-213ENST00000622433 TM4SF1P30408 202 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms