RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 FANCIQ9NVI1 1328 aa12.5□□□□□ -0.41
TRIO-224ENST00000620511 CYP19A1P11511 503 aaPredicted RBP12.5□□□□□ -0.41
TRIO-224ENST00000620511 SLFN5Q08AF3 891 aa12.5□□□□□ -0.41
TRIO-224ENST00000620511 INTS5Q6P9B9 1019 aaKnown RBP12.5□□□□□ -0.41
TRIO-224ENST00000620511 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
TRIO-224ENST00000620511 SRCAPQ6ZRS2 3230 aa12.49□□□□□ -0.41
TRIO-224ENST00000620511 SNRPA1P09661 255 aaKnown RBP12.49□□□□□ -0.41
TRIO-224ENST00000620511 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
TRIO-224ENST00000620511 PPP4R3CPQ6ZMV5 832 aa12.49□□□□□ -0.41
TRIO-224ENST00000620511 TSPYL6Q8N831 410 aa12.49□□□□□ -0.41
TRIO-224ENST00000620511 ZBED9Q6R2W3 1325 aa12.49□□□□□ -0.41
TRIO-224ENST00000620511 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
TRIO-224ENST00000620511 SMIM5Q71RC9 77 aa12.48□□□□□ -0.41
TRIO-224ENST00000620511 CNTNAP4Q9C0A0 1308 aa12.48□□□□□ -0.41
TRIO-224ENST00000620511 CRKLP46109 303 aaKnown RBP12.47□□□□□ -0.41
TRIO-224ENST00000620511 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
TRIO-224ENST00000620511 DUSP27Q5VZP5 1158 aa12.47□□□□□ -0.41
TRIO-224ENST00000620511 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
TRIO-224ENST00000620511 A1BGP04217 495 aa12.47□□□□□ -0.41
TRIO-224ENST00000620511 SLC15A2Q16348 729 aa12.47□□□□□ -0.41
TRIO-224ENST00000620511 NBPF14Q5TI25 921 aa12.47□□□□□ -0.41
TRIO-224ENST00000620511 NBPF10Q6P3W6 841 aaKnown RBP12.47□□□□□ -0.41
TRIO-224ENST00000620511 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
TRIO-224ENST00000620511 PDGFDQ9GZP0 370 aaPredicted RBP12.47□□□□□ -0.41
TRIO-224ENST00000620511 E9PSI1 815 aa12.46□□□□□ -0.42
TRIO-224ENST00000620511 ELL2O00472 640 aaPredicted RBP12.46□□□□□ -0.42
TRIO-224ENST00000620511 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.42
TRIO-224ENST00000620511 PDIA6Q15084 440 aa12.46□□□□□ -0.42
TRIO-224ENST00000620511 LRP10Q7Z4F1 713 aa12.46□□□□□ -0.42
TRIO-224ENST00000620511 TEX13AQ9BXU3 409 aaPredicted RBP12.46□□□□□ -0.42
TRIO-224ENST00000620511 ZBTB1Q9Y2K1 713 aa12.46□□□□□ -0.42
TRIO-224ENST00000620511 CASZ1Q86V15 1759 aa12.45□□□□□ -0.42
TRIO-224ENST00000620511 HOXB7P09629 217 aa12.45□□□□□ -0.42
TRIO-224ENST00000620511 PIP4K2AP48426 406 aaPredicted RBP12.45□□□□□ -0.42
TRIO-224ENST00000620511 MYH16Q9H6N6 1097 aa12.45□□□□□ -0.42
TRIO-224ENST00000620511 CCDC87Q9NVE4 849 aa12.45□□□□□ -0.42
TRIO-224ENST00000620511 PNPLA7Q6ZV29 1317 aa12.45□□□□□ -0.42
TRIO-224ENST00000620511 C4AP0C0L4 1744 aa12.45□□□□□ -0.42
TRIO-224ENST00000620511 VAMP4O75379 141 aa12.44□□□□□ -0.42
TRIO-224ENST00000620511 RPS6KA4O75676 772 aa12.44□□□□□ -0.42
TRIO-224ENST00000620511 STARD3NLO95772 234 aa12.44□□□□□ -0.42
TRIO-224ENST00000620511 SOS1Q07889 1333 aaPredicted RBP12.44□□□□□ -0.42
TRIO-224ENST00000620511 EIF5P55010 431 aaKnown RBP12.43□□□□□ -0.42
TRIO-224ENST00000620511 R3HDM1Q15032 1099 aaKnown RBP12.43□□□□□ -0.42
TRIO-224ENST00000620511 PROSER3Q2NL68 480 aa12.43□□□□□ -0.42
TRIO-224ENST00000620511 STK32BQ9NY57 414 aa12.43□□□□□ -0.42
TRIO-224ENST00000620511 GNPATO15228 680 aa12.42□□□□□ -0.42
TRIO-224ENST00000620511 EIF2S2P20042 333 aaKnown RBP12.42□□□□□ -0.42
TRIO-224ENST00000620511 TWISTNBQ3B726 338 aaPredicted RBP12.42□□□□□ -0.42
TRIO-224ENST00000620511 COL23A1Q86Y22 540 aaPredicted RBP12.42□□□□□ -0.42
TRIO-224ENST00000620511 NECTIN2Q92692 538 aa12.42□□□□□ -0.42
TRIO-224ENST00000620511 AK7Q96M32 723 aa12.42□□□□□ -0.42
TRIO-224ENST00000620511 CACNA1FO60840 1977 aa12.42□□□□□ -0.42
TRIO-224ENST00000620511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.42□□□□□ -0.42
TRIO-224ENST00000620511 PSDA5PKW4 1024 aaPredicted RBP12.42□□□□□ -0.42
TRIO-224ENST00000620511 ANXA1P04083 346 aa12.42□□□□□ -0.42
TRIO-224ENST00000620511 CANXP27824 592 aaKnown RBP12.42□□□□□ -0.42
TRIO-224ENST00000620511 SSFA2P28290 1259 aa12.42□□□□□ -0.42
TRIO-224ENST00000620511 TFCP2L1Q9NZI6 479 aa12.42□□□□□ -0.42
TRIO-224ENST00000620511 IL6STP40189 918 aaPredicted RBP12.41□□□□□ -0.42
TRIO-224ENST00000620511 HDGFL1Q5TGJ6 251 aa12.41□□□□□ -0.42
TRIO-224ENST00000620511 ARHGEF1Q92888 912 aaKnown RBP12.41□□□□□ -0.42
TRIO-224ENST00000620511 RTCBQ9Y3I0 505 aaKnown RBP12.41□□□□□ -0.42
TRIO-224ENST00000620511 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.42
TRIO-224ENST00000620511 PHF14O94880 888 aa12.4□□□□□ -0.42
TRIO-224ENST00000620511 HMGB2P26583 209 aaKnown RBP12.4□□□□□ -0.42
TRIO-224ENST00000620511 CHPF2Q9P2E5 772 aa12.4□□□□□ -0.42
TRIO-224ENST00000620511 ERBB4Q15303 1308 aa12.4□□□□□ -0.42
TRIO-224ENST00000620511 COL15A1P39059 1388 aa12.4□□□□□ -0.42
TRIO-224ENST00000620511 TCERG1O14776 1098 aaKnown RBP12.39□□□□□ -0.43
TRIO-224ENST00000620511 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRIO-224ENST00000620511 BCORQ6W2J9 1755 aa12.38□□□□□ -0.43
TRIO-224ENST00000620511 MYL6BP14649 208 aa12.38□□□□□ -0.43
TRIO-224ENST00000620511 TRAPPC3LQ5T215 181 aa12.38□□□□□ -0.43
TRIO-224ENST00000620511 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
TRIO-224ENST00000620511 DBF4Q9UBU7 674 aaPredicted RBP12.38□□□□□ -0.43
TRIO-224ENST00000620511 CCDC30Q5VVM6 783 aa12.37□□□□□ -0.43
TRIO-224ENST00000620511 TTLL7Q6ZT98 887 aa12.37□□□□□ -0.43
TRIO-224ENST00000620511 SRP68Q9UHB9 627 aaKnown RBP12.37□□□□□ -0.43
TRIO-224ENST00000620511 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
TRIO-224ENST00000620511 NUP98P52948 1817 aa12.37□□□□□ -0.43
TRIO-224ENST00000620511 CAMTA2O94983 1202 aa12.37□□□□□ -0.43
TRIO-224ENST00000620511 SCN7AQ01118 1682 aa12.37□□□□□ -0.43
TRIO-224ENST00000620511 G2E3Q7L622 706 aa12.37□□□□□ -0.43
TRIO-224ENST00000620511 FLAD1Q8NFF5 587 aa12.37□□□□□ -0.43
TRIO-224ENST00000620511 PHAXQ9H814 394 aaKnown RBP12.37□□□□□ -0.43
TRIO-224ENST00000620511 NARFQ9UHQ1 456 aa12.37□□□□□ -0.43
TRIO-224ENST00000620511 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
TRIO-224ENST00000620511 GYS1P13807 737 aa12.36□□□□□ -0.43
TRIO-224ENST00000620511 SSH1Q8WYL5 1049 aa12.36□□□□□ -0.43
TRIO-224ENST00000620511 RFC4P35249 363 aa12.35□□□□□ -0.43
TRIO-224ENST00000620511 USPL1Q5W0Q7 1092 aa12.35□□□□□ -0.43
TRIO-224ENST00000620511 COPS6Q7L5N1 327 aa12.35□□□□□ -0.43
TRIO-224ENST00000620511 DZIP3Q86Y13 1208 aaKnown RBP12.35□□□□□ -0.43
TRIO-224ENST00000620511 XAGE3Q8WTP9 111 aa12.35□□□□□ -0.43
TRIO-224ENST00000620511 ZNF330Q9Y3S2 320 aaPredicted RBP12.35□□□□□ -0.43
TRIO-224ENST00000620511 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
TRIO-224ENST00000620511 CT47B1P0C2W7 299 aaPredicted RBP12.34□□□□□ -0.43
TRIO-224ENST00000620511 FKBP8Q14318 412 aa12.34□□□□□ -0.43
TRIO-224ENST00000620511 HLFQ16534 295 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms