RNA–Protein interactions for RNA: ENST00000618137.1

NLRC3-205, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 1 (best)

Gene NLRC3, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-205ENST00000618137 GIGYF1O75420 1035 aaPredicted RBP15.81■□□□□ 0.12
NLRC3-205ENST00000618137 COL23A1Q86Y22 540 aaPredicted RBP15.81■□□□□ 0.12
NLRC3-205ENST00000618137 WDR63Q8IWG1 891 aa15.81■□□□□ 0.12
NLRC3-205ENST00000618137 MTFR1LQ9H019 292 aa15.81■□□□□ 0.12
NLRC3-205ENST00000618137 LAS1LQ9Y4W2 734 aaKnown RBP15.81■□□□□ 0.12
NLRC3-205ENST00000618137 UBR3Q6ZT12 1888 aa15.8■□□□□ 0.12
NLRC3-205ENST00000618137 TRAPPC3LQ5T215 181 aa15.8■□□□□ 0.12
NLRC3-205ENST00000618137 TUBGCP6Q96RT7 1819 aa15.8■□□□□ 0.12
NLRC3-205ENST00000618137 SOS1Q07889 1333 aaPredicted RBP15.79■□□□□ 0.12
NLRC3-205ENST00000618137 MSH5O43196 834 aa15.79■□□□□ 0.12
NLRC3-205ENST00000618137 PHF14O94880 888 aa15.79■□□□□ 0.12
NLRC3-205ENST00000618137 HOXB7P09629 217 aa15.79■□□□□ 0.12
NLRC3-205ENST00000618137 PDGFDQ9GZP0 370 aaPredicted RBP15.79■□□□□ 0.12
NLRC3-205ENST00000618137 SPON1Q9HCB6 807 aa15.79■□□□□ 0.12
NLRC3-205ENST00000618137 MBIPQ9NS73 344 aa15.79■□□□□ 0.12
NLRC3-205ENST00000618137 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
NLRC3-205ENST00000618137 AMIGO3Q86WK7 504 aa15.78■□□□□ 0.12
NLRC3-205ENST00000618137 ZBTB1Q9Y2K1 713 aa15.78■□□□□ 0.12
NLRC3-205ENST00000618137 USP16Q9Y5T5 823 aa15.78■□□□□ 0.12
NLRC3-205ENST00000618137 ERBB4Q15303 1308 aa15.77■□□□□ 0.12
NLRC3-205ENST00000618137 LRP5O75197 1615 aa15.77■□□□□ 0.12
NLRC3-205ENST00000618137 PRAMEF22A3QJZ6 481 aa15.77■□□□□ 0.12
NLRC3-205ENST00000618137 RFC4P35249 363 aa15.77■□□□□ 0.12
NLRC3-205ENST00000618137 NPM2Q86SE8 214 aaKnown RBP15.77■□□□□ 0.12
NLRC3-205ENST00000618137 ARHGEF1Q92888 912 aaKnown RBP15.77■□□□□ 0.12
NLRC3-205ENST00000618137 LAMB4A4D0S4 1761 aa15.77■□□□□ 0.11
NLRC3-205ENST00000618137 MYH14Q7Z406 1995 aaKnown RBP15.76■□□□□ 0.11
NLRC3-205ENST00000618137 COL15A1P39059 1388 aa15.76■□□□□ 0.11
NLRC3-205ENST00000618137 ZNF521Q96K83 1311 aa15.76■□□□□ 0.11
NLRC3-205ENST00000618137 A0A087WZG4 1122 aa15.76■□□□□ 0.11
NLRC3-205ENST00000618137 ZBTB7AO95365 584 aa15.76■□□□□ 0.11
NLRC3-205ENST00000618137 EIF5P55010 431 aaKnown RBP15.76■□□□□ 0.11
NLRC3-205ENST00000618137 CHMP4AQ9BY43 222 aa15.76■□□□□ 0.11
NLRC3-205ENST00000618137 SALL2Q9Y467 1007 aaPredicted RBP15.76■□□□□ 0.11
NLRC3-205ENST00000618137 SENP3-EIF4A1A0A087X0R7 540 aa15.75■□□□□ 0.11
NLRC3-205ENST00000618137 A1BGP04217 495 aa15.75■□□□□ 0.11
NLRC3-205ENST00000618137 CANXP27824 592 aaKnown RBP15.75■□□□□ 0.11
NLRC3-205ENST00000618137 SRCAPQ6ZRS2 3230 aa15.74■□□□□ 0.11
NLRC3-205ENST00000618137 MYH16Q9H6N6 1097 aa15.74■□□□□ 0.11
NLRC3-205ENST00000618137 USP42Q9H9J4 1324 aaKnown RBP15.73■□□□□ 0.11
NLRC3-205ENST00000618137 ZPR1O75312 459 aa15.73■□□□□ 0.11
NLRC3-205ENST00000618137 POLD1P28340 1107 aa15.73■□□□□ 0.11
NLRC3-205ENST00000618137 SMIM5Q71RC9 77 aa15.73■□□□□ 0.11
NLRC3-205ENST00000618137 NLGN1Q8N2Q7 840 aa15.73■□□□□ 0.11
NLRC3-205ENST00000618137 SGIP1Q9BQI5 828 aa15.73■□□□□ 0.11
NLRC3-205ENST00000618137 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
NLRC3-205ENST00000618137 COL24A1Q17RW2 1714 aa15.72■□□□□ 0.11
NLRC3-205ENST00000618137 PTGER2P43116 358 aa15.72■□□□□ 0.11
NLRC3-205ENST00000618137 DUSP27Q5VZP5 1158 aa15.72■□□□□ 0.11
NLRC3-205ENST00000618137 NARFQ9UHQ1 456 aa15.72■□□□□ 0.11
NLRC3-205ENST00000618137 FANCIQ9NVI1 1328 aa15.71■□□□□ 0.11
NLRC3-205ENST00000618137 NBPF26B4DH59 902 aa15.71■□□□□ 0.11
NLRC3-205ENST00000618137 RGL2O15211 777 aa15.71■□□□□ 0.11
NLRC3-205ENST00000618137 GYS1P13807 737 aa15.71■□□□□ 0.11
NLRC3-205ENST00000618137 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
NLRC3-205ENST00000618137 KRT24Q2M2I5 525 aa15.71■□□□□ 0.11
NLRC3-205ENST00000618137 NBPF10Q6P3W6 841 aaKnown RBP15.71■□□□□ 0.11
NLRC3-205ENST00000618137 NBPF15Q8N660 670 aa15.71■□□□□ 0.11
NLRC3-205ENST00000618137 TSR2Q969E8 191 aaKnown RBP15.71■□□□□ 0.11
NLRC3-205ENST00000618137 C4AP0C0L4 1744 aa15.71■□□□□ 0.1
NLRC3-205ENST00000618137 E9PSI1 815 aa15.7■□□□□ 0.1
NLRC3-205ENST00000618137 EIF2S2P20042 333 aaKnown RBP15.7■□□□□ 0.1
NLRC3-205ENST00000618137 HDGFL1Q5TGJ6 251 aa15.7■□□□□ 0.1
NLRC3-205ENST00000618137 ZNF330Q9Y3S2 320 aaPredicted RBP15.7■□□□□ 0.1
NLRC3-205ENST00000618137 USPL1Q5W0Q7 1092 aa15.69■□□□□ 0.1
NLRC3-205ENST00000618137 C8orf58Q8NAV2 365 aa15.69■□□□□ 0.1
NLRC3-205ENST00000618137 DBF4Q9UBU7 674 aaPredicted RBP15.69■□□□□ 0.1
NLRC3-205ENST00000618137 PPP1R1BQ9UD71 204 aaPredicted RBP15.69■□□□□ 0.1
NLRC3-205ENST00000618137 PIP4K2AP48426 406 aaPredicted RBP15.68■□□□□ 0.1
NLRC3-205ENST00000618137 MSL1Q68DK7 614 aa15.68■□□□□ 0.1
NLRC3-205ENST00000618137 DZIP3Q86Y13 1208 aaKnown RBP15.68■□□□□ 0.1
NLRC3-205ENST00000618137 ARXQ96QS3 562 aa15.68■□□□□ 0.1
NLRC3-205ENST00000618137 DDX21Q9NR30 783 aaKnown RBP eCLIP15.68■□□□□ 0.1
NLRC3-205ENST00000618137 SRP68Q9UHB9 627 aaKnown RBP15.68■□□□□ 0.1
NLRC3-205ENST00000618137 PDIA6Q15084 440 aa15.67■□□□□ 0.1
NLRC3-205ENST00000618137 TWISTNBQ3B726 338 aaPredicted RBP15.67■□□□□ 0.1
NLRC3-205ENST00000618137 CCDC30Q5VVM6 783 aa15.67■□□□□ 0.1
NLRC3-205ENST00000618137 CLEC4GQ6UXB4 293 aa15.67■□□□□ 0.1
NLRC3-205ENST00000618137 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
NLRC3-205ENST00000618137 TBC1D2BQ9UPU7 963 aa15.67■□□□□ 0.1
NLRC3-205ENST00000618137 ZNF652Q9Y2D9 606 aa15.67■□□□□ 0.1
NLRC3-205ENST00000618137 ERVV-1B6SEH8 477 aa15.66■□□□□ 0.1
NLRC3-205ENST00000618137 ELL2O00472 640 aaPredicted RBP15.66■□□□□ 0.1
NLRC3-205ENST00000618137 CAMTA2O94983 1202 aa15.66■□□□□ 0.1
NLRC3-205ENST00000618137 MYL6BP14649 208 aa15.66■□□□□ 0.1
NLRC3-205ENST00000618137 FKBP8Q14318 412 aa15.66■□□□□ 0.1
NLRC3-205ENST00000618137 KIF6Q6ZMV9 814 aa15.66■□□□□ 0.1
NLRC3-205ENST00000618137 LRP10Q7Z4F1 713 aa15.66■□□□□ 0.1
NLRC3-205ENST00000618137 HYPKQ9NX55 129 aa15.66■□□□□ 0.1
NLRC3-205ENST00000618137 SCN7AQ01118 1682 aa15.66■□□□□ 0.1
NLRC3-205ENST00000618137 MMP10P09238 476 aa15.65■□□□□ 0.1
NLRC3-205ENST00000618137 HNRNPUQ00839 825 aaKnown RBP eCLIP15.65■□□□□ 0.1
NLRC3-205ENST00000618137 SLFN5Q08AF3 891 aa15.65■□□□□ 0.1
NLRC3-205ENST00000618137 TSPYL6Q8N831 410 aa15.65■□□□□ 0.1
NLRC3-205ENST00000618137 NECTIN2Q92692 538 aa15.65■□□□□ 0.1
NLRC3-205ENST00000618137 CHPF2Q9P2E5 772 aa15.65■□□□□ 0.1
NLRC3-205ENST00000618137 TM4SF1P30408 202 aa15.64■□□□□ 0.09
NLRC3-205ENST00000618137 EXOSC9Q06265 439 aaKnown RBP15.64■□□□□ 0.09
NLRC3-205ENST00000618137 BCL2L12Q9HB09 334 aa15.64■□□□□ 0.09
NLRC3-205ENST00000618137 PARP3Q9Y6F1 533 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms