RNA–Protein interactions for RNA: ENST00000617710.4

LPCAT4-209, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 5 BASIC

Gene LPCAT4, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-209ENST00000617710 KRT24Q2M2I5 525 aa17.82■□□□□ 0.44
LPCAT4-209ENST00000617710 COL23A1Q86Y22 540 aaPredicted RBP17.82■□□□□ 0.44
LPCAT4-209ENST00000617710 IFT57Q9NWB7 429 aa17.82■□□□□ 0.44
LPCAT4-209ENST00000617710 GIGYF1O75420 1035 aaPredicted RBP17.81■□□□□ 0.44
LPCAT4-209ENST00000617710 CALD1Q05682 793 aaKnown RBP17.81■□□□□ 0.44
LPCAT4-209ENST00000617710 CCDC87Q9NVE4 849 aa17.81■□□□□ 0.44
LPCAT4-209ENST00000617710 ZBTB1Q9Y2K1 713 aa17.81■□□□□ 0.44
LPCAT4-209ENST00000617710 STARD3NLO95772 234 aa17.81■□□□□ 0.44
LPCAT4-209ENST00000617710 GOLGB1Q14789 3259 aaKnown RBP17.8■□□□□ 0.44
LPCAT4-209ENST00000617710 SSFA2P28290 1259 aa17.8■□□□□ 0.44
LPCAT4-209ENST00000617710 GNAI1P63096 354 aa17.8■□□□□ 0.44
LPCAT4-209ENST00000617710 TEX13AQ9BXU3 409 aaPredicted RBP17.8■□□□□ 0.44
LPCAT4-209ENST00000617710 RTCBQ9Y3I0 505 aaKnown RBP17.8■□□□□ 0.44
LPCAT4-209ENST00000617710 LAMB4A4D0S4 1761 aa17.8■□□□□ 0.44
LPCAT4-209ENST00000617710 RPS6KA4O75676 772 aa17.79■□□□□ 0.44
LPCAT4-209ENST00000617710 ZBTB7AO95365 584 aa17.79■□□□□ 0.44
LPCAT4-209ENST00000617710 A1BGP04217 495 aa17.79■□□□□ 0.44
LPCAT4-209ENST00000617710 ZNF521Q96K83 1311 aa17.79■□□□□ 0.44
LPCAT4-209ENST00000617710 PIP4K2AP48426 406 aaPredicted RBP17.78■□□□□ 0.44
LPCAT4-209ENST00000617710 NGEFQ8N5V2 710 aa17.78■□□□□ 0.44
LPCAT4-209ENST00000617710 TSR2Q969E8 191 aaKnown RBP17.78■□□□□ 0.44
LPCAT4-209ENST00000617710 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
LPCAT4-209ENST00000617710 C4AP0C0L4 1744 aa17.78■□□□□ 0.44
LPCAT4-209ENST00000617710 MSH5O43196 834 aa17.78■□□□□ 0.44
LPCAT4-209ENST00000617710 CANXP27824 592 aaKnown RBP17.78■□□□□ 0.44
LPCAT4-209ENST00000617710 WDR63Q8IWG1 891 aa17.77■□□□□ 0.44
LPCAT4-209ENST00000617710 ARHGEF1Q92888 912 aaKnown RBP17.77■□□□□ 0.44
LPCAT4-209ENST00000617710 SOS1Q07889 1333 aaPredicted RBP17.77■□□□□ 0.43
LPCAT4-209ENST00000617710 IL16Q14005 1332 aa17.77■□□□□ 0.43
LPCAT4-209ENST00000617710 TRAPPC3LQ5T215 181 aa17.76■□□□□ 0.43
LPCAT4-209ENST00000617710 FLAD1Q8NFF5 587 aa17.76■□□□□ 0.43
LPCAT4-209ENST00000617710 UTRNP46939 3433 aa17.75■□□□□ 0.43
LPCAT4-209ENST00000617710 COL15A1P39059 1388 aa17.75■□□□□ 0.43
LPCAT4-209ENST00000617710 NBPF26B4DH59 902 aa17.75■□□□□ 0.43
LPCAT4-209ENST00000617710 CENPBP07199 599 aaPredicted RBP17.75■□□□□ 0.43
LPCAT4-209ENST00000617710 ADRA2BP18089 450 aa17.75■□□□□ 0.43
LPCAT4-209ENST00000617710 NBPF10Q6P3W6 841 aaKnown RBP17.75■□□□□ 0.43
LPCAT4-209ENST00000617710 NBPF15Q8N660 670 aa17.75■□□□□ 0.43
LPCAT4-209ENST00000617710 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
LPCAT4-209ENST00000617710 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
LPCAT4-209ENST00000617710 MTFR1LQ9H019 292 aa17.74■□□□□ 0.43
LPCAT4-209ENST00000617710 ZNF330Q9Y3S2 320 aaPredicted RBP17.74■□□□□ 0.43
LPCAT4-209ENST00000617710 FANCIQ9NVI1 1328 aa17.74■□□□□ 0.43
LPCAT4-209ENST00000617710 ELL2O00472 640 aaPredicted RBP17.73■□□□□ 0.43
LPCAT4-209ENST00000617710 EIF2S2P20042 333 aaKnown RBP17.73■□□□□ 0.43
LPCAT4-209ENST00000617710 MSL1Q68DK7 614 aa17.73■□□□□ 0.43
LPCAT4-209ENST00000617710 C8orf58Q8NAV2 365 aa17.73■□□□□ 0.43
LPCAT4-209ENST00000617710 SLC16A10Q8TF71 515 aa17.73■□□□□ 0.43
LPCAT4-209ENST00000617710 RFC4P35249 363 aa17.72■□□□□ 0.43
LPCAT4-209ENST00000617710 IL6STP40189 918 aaPredicted RBP17.72■□□□□ 0.43
LPCAT4-209ENST00000617710 DUSP27Q5VZP5 1158 aa17.72■□□□□ 0.43
LPCAT4-209ENST00000617710 NECTIN2Q92692 538 aa17.72■□□□□ 0.43
LPCAT4-209ENST00000617710 SRP68Q9UHB9 627 aaKnown RBP17.72■□□□□ 0.43
LPCAT4-209ENST00000617710 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
LPCAT4-209ENST00000617710 SPON1Q9HCB6 807 aa17.72■□□□□ 0.43
LPCAT4-209ENST00000617710 USP42Q9H9J4 1324 aaKnown RBP17.71■□□□□ 0.43
LPCAT4-209ENST00000617710 PTGER2P43116 358 aa17.71■□□□□ 0.43
LPCAT4-209ENST00000617710 SGIP1Q9BQI5 828 aa17.71■□□□□ 0.43
LPCAT4-209ENST00000617710 COL24A1Q17RW2 1714 aa17.71■□□□□ 0.42
LPCAT4-209ENST00000617710 HNRNPUQ00839 825 aaKnown RBP eCLIP17.7■□□□□ 0.42
LPCAT4-209ENST00000617710 PDIA6Q15084 440 aa17.7■□□□□ 0.42
LPCAT4-209ENST00000617710 LRP5O75197 1615 aa17.7■□□□□ 0.42
LPCAT4-209ENST00000617710 ANXA1P04083 346 aa17.69■□□□□ 0.42
LPCAT4-209ENST00000617710 HOXB7P09629 217 aa17.69■□□□□ 0.42
LPCAT4-209ENST00000617710 GYS1P13807 737 aa17.69■□□□□ 0.42
LPCAT4-209ENST00000617710 GOLGA2Q08379 1002 aa17.69■□□□□ 0.42
LPCAT4-209ENST00000617710 PROSER3Q2NL68 480 aa17.69■□□□□ 0.42
LPCAT4-209ENST00000617710 CDCA7LQ96GN5 454 aa17.69■□□□□ 0.42
LPCAT4-209ENST00000617710 TBC1D2BQ9UPU7 963 aa17.69■□□□□ 0.42
LPCAT4-209ENST00000617710 MYL6BP14649 208 aa17.69■□□□□ 0.42
LPCAT4-209ENST00000617710 HDGFL1Q5TGJ6 251 aa17.69■□□□□ 0.42
LPCAT4-209ENST00000617710 USPL1Q5W0Q7 1092 aa17.68■□□□□ 0.42
LPCAT4-209ENST00000617710 LRP10Q7Z4F1 713 aa17.68■□□□□ 0.42
LPCAT4-209ENST00000617710 MYH16Q9H6N6 1097 aa17.68■□□□□ 0.42
LPCAT4-209ENST00000617710 NARFQ9UHQ1 456 aa17.68■□□□□ 0.42
LPCAT4-209ENST00000617710 ARXQ96QS3 562 aa17.67■□□□□ 0.42
LPCAT4-209ENST00000617710 CHPF2Q9P2E5 772 aa17.67■□□□□ 0.42
LPCAT4-209ENST00000617710 ERBB4Q15303 1308 aa17.67■□□□□ 0.42
LPCAT4-209ENST00000617710 ZPR1O75312 459 aa17.67■□□□□ 0.42
LPCAT4-209ENST00000617710 EXOSC9Q06265 439 aaKnown RBP17.67■□□□□ 0.42
LPCAT4-209ENST00000617710 FKBP8Q14318 412 aa17.67■□□□□ 0.42
LPCAT4-209ENST00000617710 BCL2L12Q9HB09 334 aa17.67■□□□□ 0.42
LPCAT4-209ENST00000617710 SCN7AQ01118 1682 aa17.66■□□□□ 0.42
LPCAT4-209ENST00000617710 TWISTNBQ3B726 338 aaPredicted RBP17.66■□□□□ 0.42
LPCAT4-209ENST00000617710 NPM2Q86SE8 214 aaKnown RBP17.66■□□□□ 0.42
LPCAT4-209ENST00000617710 DZIP3Q86Y13 1208 aaKnown RBP17.66■□□□□ 0.42
LPCAT4-209ENST00000617710 A0A087WZG4 1122 aa17.65■□□□□ 0.42
LPCAT4-209ENST00000617710 E9PSI1 815 aa17.65■□□□□ 0.42
LPCAT4-209ENST00000617710 SLFN5Q08AF3 891 aa17.65■□□□□ 0.42
LPCAT4-209ENST00000617710 CAMTA2O94983 1202 aa17.64■□□□□ 0.41
LPCAT4-209ENST00000617710 TTLL7Q6ZT98 887 aa17.64■□□□□ 0.41
LPCAT4-209ENST00000617710 NLGN1Q8N2Q7 840 aa17.64■□□□□ 0.41
LPCAT4-209ENST00000617710 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.41
LPCAT4-209ENST00000617710 BCORQ6W2J9 1755 aa17.64■□□□□ 0.41
LPCAT4-209ENST00000617710 TCERG1O14776 1098 aaKnown RBP17.63■□□□□ 0.41
LPCAT4-209ENST00000617710 MMP10P09238 476 aa17.63■□□□□ 0.41
LPCAT4-209ENST00000617710 DBF4Q9UBU7 674 aaPredicted RBP17.63■□□□□ 0.41
LPCAT4-209ENST00000617710 VAMP4O75379 141 aa17.62■□□□□ 0.41
LPCAT4-209ENST00000617710 POLD1P28340 1107 aa17.62■□□□□ 0.41
LPCAT4-209ENST00000617710 TRMT2AQ8IZ69 625 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms