RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 ANAPC15P60006 121 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 NUCB2P80303 420 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 MTX1Q13505 466 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 PPP1R42Q7Z4L9 355 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 PI4KAP1Q8N8J0 262 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 KIF1BPQ96EK5 621 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 IL17RAQ96F46 866 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 ESYT1Q9BSJ8 1104 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 TUBGCP6Q96RT7 1819 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 ALS2Q96Q42 1657 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 ERBB3P21860 1342 aa12.78□□□□□ -0.36
PABPC1-224ENST00000610907 ATF3P18847 181 aa12.77□□□□□ -0.36
PABPC1-224ENST00000610907 LMOD2Q6P5Q4 547 aa12.77□□□□□ -0.36
PABPC1-224ENST00000610907 KSR2Q6VAB6 950 aa12.77□□□□□ -0.36
PABPC1-224ENST00000610907 KCNQ3O43525 872 aa12.77□□□□□ -0.37
PABPC1-224ENST00000610907 SURF6O75683 361 aaKnown RBP12.77□□□□□ -0.37
PABPC1-224ENST00000610907 CHMLP26374 656 aa12.77□□□□□ -0.37
PABPC1-224ENST00000610907 XPCQ01831 940 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-224ENST00000610907 RHPN1Q8TCX5 695 aa12.77□□□□□ -0.37
PABPC1-224ENST00000610907 AXIN2Q9Y2T1 843 aa12.77□□□□□ -0.37
PABPC1-224ENST00000610907 SIPA1L3O60292 1781 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-224ENST00000610907 ADCY9O60503 1353 aa12.76□□□□□ -0.37
PABPC1-224ENST00000610907 GOLGA6L22H0YM25 854 aa12.76□□□□□ -0.37
PABPC1-224ENST00000610907 SRGAP3O43295 1099 aa12.76□□□□□ -0.37
PABPC1-224ENST00000610907 DDX58O95786 925 aaKnown RBP12.76□□□□□ -0.37
PABPC1-224ENST00000610907 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
PABPC1-224ENST00000610907 PXDNQ92626 1479 aa12.76□□□□□ -0.37
PABPC1-224ENST00000610907 USP42Q9H9J4 1324 aaKnown RBP12.75□□□□□ -0.37
PABPC1-224ENST00000610907 FSD2A1L4K1 749 aa12.75□□□□□ -0.37
PABPC1-224ENST00000610907 NBPF7P0C2Y1 421 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-224ENST00000610907 DDX21Q9NR30 783 aaKnown RBP eCLIP12.75□□□□□ -0.37
PABPC1-224ENST00000610907 SPG7Q9UQ90 795 aa12.75□□□□□ -0.37
PABPC1-224ENST00000610907 GOLGA6L3A6NEY3 463 aa12.74□□□□□ -0.37
PABPC1-224ENST00000610907 TRIM6-TRIM34B2RNG4 842 aa12.74□□□□□ -0.37
PABPC1-224ENST00000610907 TATP17735 454 aaPredicted RBP12.74□□□□□ -0.37
PABPC1-224ENST00000610907 CADPS2Q86UW7 1296 aa12.74□□□□□ -0.37
PABPC1-224ENST00000610907 ERC1Q8IUD2 1116 aa12.74□□□□□ -0.37
PABPC1-224ENST00000610907 UTYO14607 1347 aa12.74□□□□□ -0.37
PABPC1-224ENST00000610907 TTC41PQ6P2S7 1318 aa12.74□□□□□ -0.37
PABPC1-224ENST00000610907 NPHP3Q7Z494 1330 aa12.74□□□□□ -0.37
PABPC1-224ENST00000610907 LINS1Q8NG48 757 aa12.73□□□□□ -0.37
PABPC1-224ENST00000610907 RILPL2Q969X0 211 aa12.73□□□□□ -0.37
PABPC1-224ENST00000610907 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
PABPC1-224ENST00000610907 C9orf78Q9NZ63 289 aaPredicted RBP12.73□□□□□ -0.37
PABPC1-224ENST00000610907 MAP3K2Q9Y2U5 619 aa12.73□□□□□ -0.37
PABPC1-224ENST00000610907 TMEM94Q12767 1356 aa12.72□□□□□ -0.37
PABPC1-224ENST00000610907 CYP2E1P05181 493 aaPredicted RBP12.72□□□□□ -0.37
PABPC1-224ENST00000610907 ZC3H6P61129 1189 aaKnown RBP12.72□□□□□ -0.37
PABPC1-224ENST00000610907 ZNF790Q6PG37 636 aa12.72□□□□□ -0.37
PABPC1-224ENST00000610907 IFNL2Q8IZJ0 200 aa12.72□□□□□ -0.37
PABPC1-224ENST00000610907 CNTROBQ8N137 903 aa12.72□□□□□ -0.37
PABPC1-224ENST00000610907 PI4K2BQ8TCG2 481 aa12.72□□□□□ -0.37
PABPC1-224ENST00000610907 RGPD5Q99666 1765 aa12.71□□□□□ -0.37
PABPC1-224ENST00000610907 GLRX3O76003 335 aaKnown RBP12.71□□□□□ -0.37
PABPC1-224ENST00000610907 PHKG2P15735 406 aa12.71□□□□□ -0.37
PABPC1-224ENST00000610907 MRE11P49959 708 aa12.71□□□□□ -0.37
PABPC1-224ENST00000610907 LARP1Q6PKG0 1096 aaKnown RBP12.71□□□□□ -0.37
PABPC1-224ENST00000610907 CLASRPQ8N2M8 674 aaKnown RBP12.71□□□□□ -0.37
PABPC1-224ENST00000610907 IL1RAPL2Q9NP60 686 aa12.71□□□□□ -0.37
PABPC1-224ENST00000610907 NLRP2Q9NX02 1062 aa12.71□□□□□ -0.37
PABPC1-224ENST00000610907 BRPF3Q9ULD4 1205 aa12.71□□□□□ -0.37
PABPC1-224ENST00000610907 COL18A1P39060 1754 aa12.71□□□□□ -0.38
PABPC1-224ENST00000610907 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.38
PABPC1-224ENST00000610907 SSFA2P28290 1259 aa12.7□□□□□ -0.38
PABPC1-224ENST00000610907 NEK4P51957 841 aa12.7□□□□□ -0.38
PABPC1-224ENST00000610907 TSHZ3Q63HK5 1081 aa12.7□□□□□ -0.38
PABPC1-224ENST00000610907 NUTM1Q86Y26 1132 aa12.7□□□□□ -0.38
PABPC1-224ENST00000610907 INTS4Q96HW7 963 aaKnown RBP12.7□□□□□ -0.38
PABPC1-224ENST00000610907 GPATCH3Q96I76 525 aa12.7□□□□□ -0.38
PABPC1-224ENST00000610907 ANO2Q9NQ90 1003 aa12.7□□□□□ -0.38
PABPC1-224ENST00000610907 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
PABPC1-224ENST00000610907 CPDO75976 1380 aa12.7□□□□□ -0.38
PABPC1-224ENST00000610907 TNS3Q68CZ2 1445 aa12.7□□□□□ -0.38
PABPC1-224ENST00000610907 GRM8O00222 908 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 BAG4O95429 457 aaKnown RBP12.69□□□□□ -0.38
PABPC1-224ENST00000610907 ANXA1P04083 346 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 CUL4AQ13619 759 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 PDIA6Q15084 440 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 DCAF5Q96JK2 942 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 MRC1P22897 1456 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 SGSM2O43147 1006 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 HSPA4P34932 840 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 HSPA2P54652 639 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 NEXNQ0ZGT2 675 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 OS9Q13438 667 aaPredicted RBP12.69□□□□□ -0.38
PABPC1-224ENST00000610907 PROSER3Q2NL68 480 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 UNC5CLQ8IV45 518 aa12.69□□□□□ -0.38
PABPC1-224ENST00000610907 SPATA31A3Q5VYP0 1347 aa12.68□□□□□ -0.38
PABPC1-224ENST00000610907 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
PABPC1-224ENST00000610907 KLHL40Q2TBA0 621 aa12.68□□□□□ -0.38
PABPC1-224ENST00000610907 RUFY2Q8WXA3 655 aa12.68□□□□□ -0.38
PABPC1-224ENST00000610907 GZF1Q9H116 711 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-224ENST00000610907 ECHDC1Q9NTX5 307 aa12.68□□□□□ -0.38
PABPC1-224ENST00000610907 KDM6AO15550 1401 aaPredicted RBP12.68□□□□□ -0.38
PABPC1-224ENST00000610907 SNRPA1P09661 255 aaKnown RBP12.67□□□□□ -0.38
PABPC1-224ENST00000610907 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
PABPC1-224ENST00000610907 XRCC6P12956 609 aaKnown RBP eCLIP12.67□□□□□ -0.38
PABPC1-224ENST00000610907 RIC3Q7Z5B4 369 aa12.67□□□□□ -0.38
PABPC1-224ENST00000610907 TMX3Q96JJ7 454 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms