RNA–Protein interactions for RNA: ENST00000606873.1

SNAP47-212, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 2

Gene SNAP47, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-212ENST00000606873 SSFA2P28290 1259 aa16.16■□□□□ 0.18
SNAP47-212ENST00000606873 EIF4A1P60842 406 aaKnown RBP16.16■□□□□ 0.18
SNAP47-212ENST00000606873 WDR63Q8IWG1 891 aa16.16■□□□□ 0.18
SNAP47-212ENST00000606873 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
SNAP47-212ENST00000606873 RPS6KA4O75676 772 aa16.15■□□□□ 0.18
SNAP47-212ENST00000606873 CYP19A1P11511 503 aaPredicted RBP16.15■□□□□ 0.18
SNAP47-212ENST00000606873 ARXQ96QS3 562 aa16.15■□□□□ 0.18
SNAP47-212ENST00000606873 PNPLA7Q6ZV29 1317 aa16.15■□□□□ 0.18
SNAP47-212ENST00000606873 CASZ1Q86V15 1759 aa16.14■□□□□ 0.17
SNAP47-212ENST00000606873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
SNAP47-212ENST00000606873 RFC4P35249 363 aa16.14■□□□□ 0.17
SNAP47-212ENST00000606873 SLC16A10Q8TF71 515 aa16.14■□□□□ 0.17
SNAP47-212ENST00000606873 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
SNAP47-212ENST00000606873 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
SNAP47-212ENST00000606873 IL16Q14005 1332 aa16.14■□□□□ 0.17
SNAP47-212ENST00000606873 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
SNAP47-212ENST00000606873 ADRA2BP18089 450 aa16.13■□□□□ 0.17
SNAP47-212ENST00000606873 COL23A1Q86Y22 540 aaPredicted RBP16.13■□□□□ 0.17
SNAP47-212ENST00000606873 A0A087WZG4 1122 aa16.12■□□□□ 0.17
SNAP47-212ENST00000606873 ZBTB7AO95365 584 aa16.12■□□□□ 0.17
SNAP47-212ENST00000606873 EIF2S2P20042 333 aaKnown RBP16.12■□□□□ 0.17
SNAP47-212ENST00000606873 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
SNAP47-212ENST00000606873 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
SNAP47-212ENST00000606873 SPON1Q9HCB6 807 aa16.12■□□□□ 0.17
SNAP47-212ENST00000606873 ZBTB1Q9Y2K1 713 aa16.12■□□□□ 0.17
SNAP47-212ENST00000606873 PRAMEF22A3QJZ6 481 aa16.11■□□□□ 0.17
SNAP47-212ENST00000606873 ZPR1O75312 459 aa16.11■□□□□ 0.17
SNAP47-212ENST00000606873 A1BGP04217 495 aa16.11■□□□□ 0.17
SNAP47-212ENST00000606873 ZNF853P0CG23 659 aa16.11■□□□□ 0.17
SNAP47-212ENST00000606873 GOLGA2Q08379 1002 aa16.11■□□□□ 0.17
SNAP47-212ENST00000606873 INTS5Q6P9B9 1019 aaKnown RBP16.11■□□□□ 0.17
SNAP47-212ENST00000606873 MTFR1LQ9H019 292 aa16.11■□□□□ 0.17
SNAP47-212ENST00000606873 POLD1P28340 1107 aa16.1■□□□□ 0.17
SNAP47-212ENST00000606873 HNRNPUQ00839 825 aaKnown RBP eCLIP16.1■□□□□ 0.17
SNAP47-212ENST00000606873 ARHGEF1Q92888 912 aaKnown RBP16.1■□□□□ 0.17
SNAP47-212ENST00000606873 ATF5Q9Y2D1 282 aaPredicted RBP16.1■□□□□ 0.17
SNAP47-212ENST00000606873 C4AP0C0L4 1744 aa16.1■□□□□ 0.17
SNAP47-212ENST00000606873 IL6STP40189 918 aaPredicted RBP16.09■□□□□ 0.17
SNAP47-212ENST00000606873 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
SNAP47-212ENST00000606873 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
SNAP47-212ENST00000606873 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
SNAP47-212ENST00000606873 PDGFDQ9GZP0 370 aaPredicted RBP16.09■□□□□ 0.17
SNAP47-212ENST00000606873 PPP1R1BQ9UD71 204 aaPredicted RBP16.09■□□□□ 0.17
SNAP47-212ENST00000606873 COL15A1P39059 1388 aa16.09■□□□□ 0.17
SNAP47-212ENST00000606873 ELL2O00472 640 aaPredicted RBP16.08■□□□□ 0.16
SNAP47-212ENST00000606873 HOXB7P09629 217 aa16.08■□□□□ 0.16
SNAP47-212ENST00000606873 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.16
SNAP47-212ENST00000606873 NECTIN2Q92692 538 aa16.08■□□□□ 0.16
SNAP47-212ENST00000606873 SOS1Q07889 1333 aaPredicted RBP16.08■□□□□ 0.16
SNAP47-212ENST00000606873 MYL6BP14649 208 aa16.07■□□□□ 0.16
SNAP47-212ENST00000606873 ERBB4Q15303 1308 aa16.07■□□□□ 0.16
SNAP47-212ENST00000606873 CACNA1FO60840 1977 aa16.06■□□□□ 0.16
SNAP47-212ENST00000606873 PIP4K2AP48426 406 aaPredicted RBP16.06■□□□□ 0.16
SNAP47-212ENST00000606873 EIF5P55010 431 aaKnown RBP16.06■□□□□ 0.16
SNAP47-212ENST00000606873 KRT24Q2M2I5 525 aa16.06■□□□□ 0.16
SNAP47-212ENST00000606873 MSL1Q68DK7 614 aa16.06■□□□□ 0.16
SNAP47-212ENST00000606873 NLGN1Q8N2Q7 840 aa16.06■□□□□ 0.16
SNAP47-212ENST00000606873 FANCIQ9NVI1 1328 aa16.05■□□□□ 0.16
SNAP47-212ENST00000606873 E9PSI1 815 aa16.05■□□□□ 0.16
SNAP47-212ENST00000606873 KIF6Q6ZMV9 814 aa16.05■□□□□ 0.16
SNAP47-212ENST00000606873 AMIGO3Q86WK7 504 aa16.05■□□□□ 0.16
SNAP47-212ENST00000606873 DZIP3Q86Y13 1208 aaKnown RBP16.05■□□□□ 0.16
SNAP47-212ENST00000606873 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
SNAP47-212ENST00000606873 TWISTNBQ3B726 338 aaPredicted RBP16.04■□□□□ 0.16
SNAP47-212ENST00000606873 CCDC30Q5VVM6 783 aa16.04■□□□□ 0.16
SNAP47-212ENST00000606873 USPL1Q5W0Q7 1092 aa16.04■□□□□ 0.16
SNAP47-212ENST00000606873 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
SNAP47-212ENST00000606873 STK31Q9BXU1 1019 aa16.04■□□□□ 0.16
SNAP47-212ENST00000606873 TBC1D2BQ9UPU7 963 aa16.04■□□□□ 0.16
SNAP47-212ENST00000606873 USP42Q9H9J4 1324 aaKnown RBP16.03■□□□□ 0.16
SNAP47-212ENST00000606873 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
SNAP47-212ENST00000606873 DBF4Q9UBU7 674 aaPredicted RBP16.03■□□□□ 0.16
SNAP47-212ENST00000606873 SRP68Q9UHB9 627 aaKnown RBP16.03■□□□□ 0.16
SNAP47-212ENST00000606873 ZNF652Q9Y2D9 606 aa16.03■□□□□ 0.16
SNAP47-212ENST00000606873 LRP5O75197 1615 aa16.03■□□□□ 0.16
SNAP47-212ENST00000606873 ZNF521Q96K83 1311 aa16.02■□□□□ 0.16
SNAP47-212ENST00000606873 NBPF26B4DH59 902 aa16.02■□□□□ 0.16
SNAP47-212ENST00000606873 NBPF10Q6P3W6 841 aaKnown RBP16.02■□□□□ 0.16
SNAP47-212ENST00000606873 KLHL34Q8N239 644 aa16.02■□□□□ 0.16
SNAP47-212ENST00000606873 NBPF15Q8N660 670 aa16.02■□□□□ 0.16
SNAP47-212ENST00000606873 DDX21Q9NR30 783 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNAP47-212ENST00000606873 PARP3Q9Y6F1 533 aa16.02■□□□□ 0.16
SNAP47-212ENST00000606873 NUP98P52948 1817 aa16.02■□□□□ 0.16
SNAP47-212ENST00000606873 BCORQ6W2J9 1755 aa16.01■□□□□ 0.15
SNAP47-212ENST00000606873 GYS1P13807 737 aa16.01■□□□□ 0.15
SNAP47-212ENST00000606873 HYPKQ9NX55 129 aa16.01■□□□□ 0.15
SNAP47-212ENST00000606873 CHPF2Q9P2E5 772 aa16.01■□□□□ 0.15
SNAP47-212ENST00000606873 COL24A1Q17RW2 1714 aa16.01■□□□□ 0.15
SNAP47-212ENST00000606873 SCN7AQ01118 1682 aa16■□□□□ 0.15
SNAP47-212ENST00000606873 NPHP1O15259 732 aa16■□□□□ 0.15
SNAP47-212ENST00000606873 ANXA1P04083 346 aa16■□□□□ 0.15
SNAP47-212ENST00000606873 SLFN5Q08AF3 891 aa16■□□□□ 0.15
SNAP47-212ENST00000606873 AIMP1Q12904 312 aaKnown RBP16■□□□□ 0.15
SNAP47-212ENST00000606873 TSPYL6Q8N831 410 aa16■□□□□ 0.15
SNAP47-212ENST00000606873 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
SNAP47-212ENST00000606873 BICDL1Q6ZP65 573 aa15.99■□□□□ 0.15
SNAP47-212ENST00000606873 MMP10P09238 476 aa15.98■□□□□ 0.15
SNAP47-212ENST00000606873 FKBP8Q14318 412 aa15.98■□□□□ 0.15
SNAP47-212ENST00000606873 COPS6Q7L5N1 327 aa15.98■□□□□ 0.15
SNAP47-212ENST00000606873 CDCA7LQ96GN5 454 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms