RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 MSH5O43196 834 aa18.63■□□□□ 0.57
TUBE1-211ENST00000605457 ADRA2BP18089 450 aa18.63■□□□□ 0.57
TUBE1-211ENST00000605457 PTGER2P43116 358 aa18.63■□□□□ 0.57
TUBE1-211ENST00000605457 BABAM1Q9NWV8 329 aa18.63■□□□□ 0.57
TUBE1-211ENST00000605457 STARD3NLO95772 234 aa18.62■□□□□ 0.57
TUBE1-211ENST00000605457 SNRPA1P09661 255 aaKnown RBP18.62■□□□□ 0.57
TUBE1-211ENST00000605457 SGIP1Q9BQI5 828 aa18.62■□□□□ 0.57
TUBE1-211ENST00000605457 TSPYL4Q9UJ04 414 aa18.62■□□□□ 0.57
TUBE1-211ENST00000605457 ZBTB1Q9Y2K1 713 aa18.62■□□□□ 0.57
TUBE1-211ENST00000605457 PRAMEF22A3QJZ6 481 aa18.61■□□□□ 0.57
TUBE1-211ENST00000605457 EIF4A1P60842 406 aaKnown RBP18.61■□□□□ 0.57
TUBE1-211ENST00000605457 SOS1Q07889 1333 aaPredicted RBP18.6■□□□□ 0.57
TUBE1-211ENST00000605457 TRAPPC3LQ5T215 181 aa18.6■□□□□ 0.57
TUBE1-211ENST00000605457 COL15A1P39059 1388 aa18.6■□□□□ 0.57
TUBE1-211ENST00000605457 CHL1O00533 1208 aa18.6■□□□□ 0.57
TUBE1-211ENST00000605457 ARHGEF1Q92888 912 aaKnown RBP18.6■□□□□ 0.57
TUBE1-211ENST00000605457 USP16Q9Y5T5 823 aa18.6■□□□□ 0.57
TUBE1-211ENST00000605457 SCN7AQ01118 1682 aa18.59■□□□□ 0.57
TUBE1-211ENST00000605457 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
TUBE1-211ENST00000605457 CCDC27Q2M243 656 aa18.59■□□□□ 0.57
TUBE1-211ENST00000605457 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
TUBE1-211ENST00000605457 BCORQ6W2J9 1755 aa18.58■□□□□ 0.57
TUBE1-211ENST00000605457 GIGYF1O75420 1035 aaPredicted RBP18.58■□□□□ 0.56
TUBE1-211ENST00000605457 MSL1Q68DK7 614 aa18.58■□□□□ 0.56
TUBE1-211ENST00000605457 CFAP44Q96MT7 982 aa18.58■□□□□ 0.56
TUBE1-211ENST00000605457 A1BGP04217 495 aa18.56■□□□□ 0.56
TUBE1-211ENST00000605457 CANXP27824 592 aaKnown RBP18.56■□□□□ 0.56
TUBE1-211ENST00000605457 RFC4P35249 363 aa18.56■□□□□ 0.56
TUBE1-211ENST00000605457 CALD1Q05682 793 aaKnown RBP18.56■□□□□ 0.56
TUBE1-211ENST00000605457 LAS1LQ9Y4W2 734 aaKnown RBP18.56■□□□□ 0.56
TUBE1-211ENST00000605457 USP42Q9H9J4 1324 aaKnown RBP18.56■□□□□ 0.56
TUBE1-211ENST00000605457 GOLGB1Q14789 3259 aaKnown RBP18.56■□□□□ 0.56
TUBE1-211ENST00000605457 ZNF853P0CG23 659 aa18.56■□□□□ 0.56
TUBE1-211ENST00000605457 EIF5P55010 431 aaKnown RBP18.56■□□□□ 0.56
TUBE1-211ENST00000605457 WWC1Q8IX03 1113 aa18.56■□□□□ 0.56
TUBE1-211ENST00000605457 MIER1Q8N108 512 aa18.56■□□□□ 0.56
TUBE1-211ENST00000605457 IFT57Q9NWB7 429 aa18.56■□□□□ 0.56
TUBE1-211ENST00000605457 IL6STP40189 918 aaPredicted RBP18.55■□□□□ 0.56
TUBE1-211ENST00000605457 PPP1R1BQ9UD71 204 aaPredicted RBP18.55■□□□□ 0.56
TUBE1-211ENST00000605457 GYS1P13807 737 aa18.54■□□□□ 0.56
TUBE1-211ENST00000605457 POLD1P28340 1107 aa18.54■□□□□ 0.56
TUBE1-211ENST00000605457 MBIPQ9NS73 344 aa18.54■□□□□ 0.56
TUBE1-211ENST00000605457 GNAI1P63096 354 aa18.53■□□□□ 0.56
TUBE1-211ENST00000605457 SRP68Q9UHB9 627 aaKnown RBP18.53■□□□□ 0.56
TUBE1-211ENST00000605457 PIP4K2AP48426 406 aaPredicted RBP18.52■□□□□ 0.56
TUBE1-211ENST00000605457 ARXQ96QS3 562 aa18.52■□□□□ 0.56
TUBE1-211ENST00000605457 NBPF26B4DH59 902 aa18.52■□□□□ 0.55
TUBE1-211ENST00000605457 KRT24Q2M2I5 525 aa18.52■□□□□ 0.55
TUBE1-211ENST00000605457 NBPF10Q6P3W6 841 aaKnown RBP18.52■□□□□ 0.55
TUBE1-211ENST00000605457 NBPF15Q8N660 670 aa18.52■□□□□ 0.55
TUBE1-211ENST00000605457 NARFQ9UHQ1 456 aa18.52■□□□□ 0.55
TUBE1-211ENST00000605457 KIF13BQ9NQT8 1826 aa18.52■□□□□ 0.55
TUBE1-211ENST00000605457 AFDNP55196 1824 aaKnown RBP18.51■□□□□ 0.55
TUBE1-211ENST00000605457 NGEFQ8N5V2 710 aa18.51■□□□□ 0.55
TUBE1-211ENST00000605457 SALL2Q9Y467 1007 aaPredicted RBP18.51■□□□□ 0.55
TUBE1-211ENST00000605457 A0A087WZG4 1122 aa18.5■□□□□ 0.55
TUBE1-211ENST00000605457 ZPR1O75312 459 aa18.5■□□□□ 0.55
TUBE1-211ENST00000605457 NLGN1Q8N2Q7 840 aa18.5■□□□□ 0.55
TUBE1-211ENST00000605457 ZNF330Q9Y3S2 320 aaPredicted RBP18.5■□□□□ 0.55
TUBE1-211ENST00000605457 IL16Q14005 1332 aa18.5■□□□□ 0.55
TUBE1-211ENST00000605457 NUP98P52948 1817 aa18.49■□□□□ 0.55
TUBE1-211ENST00000605457 USPL1Q5W0Q7 1092 aa18.49■□□□□ 0.55
TUBE1-211ENST00000605457 UTRNP46939 3433 aa18.49■□□□□ 0.55
TUBE1-211ENST00000605457 FKBP8Q14318 412 aa18.49■□□□□ 0.55
TUBE1-211ENST00000605457 FHDC1Q9C0D6 1143 aaPredicted RBP18.49■□□□□ 0.55
TUBE1-211ENST00000605457 ERBB4Q15303 1308 aa18.48■□□□□ 0.55
TUBE1-211ENST00000605457 NRXN2Q9P2S2 1712 aa18.48■□□□□ 0.55
TUBE1-211ENST00000605457 MMP10P09238 476 aa18.48■□□□□ 0.55
TUBE1-211ENST00000605457 HOXB7P09629 217 aa18.48■□□□□ 0.55
TUBE1-211ENST00000605457 WDR63Q8IWG1 891 aa18.48■□□□□ 0.55
TUBE1-211ENST00000605457 BCL2L12Q9HB09 334 aa18.48■□□□□ 0.55
TUBE1-211ENST00000605457 NPM2Q86SE8 214 aaKnown RBP18.47■□□□□ 0.55
TUBE1-211ENST00000605457 TBC1D2BQ9UPU7 963 aa18.47■□□□□ 0.55
TUBE1-211ENST00000605457 EIF2S2P20042 333 aaKnown RBP18.46■□□□□ 0.55
TUBE1-211ENST00000605457 TSR2Q969E8 191 aaKnown RBP18.46■□□□□ 0.55
TUBE1-211ENST00000605457 ZNF521Q96K83 1311 aa18.46■□□□□ 0.55
TUBE1-211ENST00000605457 DUSP27Q5VZP5 1158 aa18.45■□□□□ 0.54
TUBE1-211ENST00000605457 DZIP3Q86Y13 1208 aaKnown RBP18.45■□□□□ 0.54
TUBE1-211ENST00000605457 KIAA1551Q9HCM1 1747 aa18.45■□□□□ 0.54
TUBE1-211ENST00000605457 CAMTA2O94983 1202 aa18.45■□□□□ 0.54
TUBE1-211ENST00000605457 PDIA6Q15084 440 aa18.45■□□□□ 0.54
TUBE1-211ENST00000605457 SYT17Q9BSW7 474 aa18.45■□□□□ 0.54
TUBE1-211ENST00000605457 CACNA1FO60840 1977 aa18.44■□□□□ 0.54
TUBE1-211ENST00000605457 MYL6BP14649 208 aa18.44■□□□□ 0.54
TUBE1-211ENST00000605457 LRP10Q7Z4F1 713 aa18.44■□□□□ 0.54
TUBE1-211ENST00000605457 TM4SF1P30408 202 aa18.43■□□□□ 0.54
TUBE1-211ENST00000605457 DDR1Q08345 913 aa18.43■□□□□ 0.54
TUBE1-211ENST00000605457 HDGFL1Q5TGJ6 251 aa18.43■□□□□ 0.54
TUBE1-211ENST00000605457 C8orf58Q8NAV2 365 aa18.43■□□□□ 0.54
TUBE1-211ENST00000605457 NECTIN2Q92692 538 aa18.43■□□□□ 0.54
TUBE1-211ENST00000605457 FANCIQ9NVI1 1328 aa18.43■□□□□ 0.54
TUBE1-211ENST00000605457 ANKRD36CQ5JPF3 1778 aa18.43■□□□□ 0.54
TUBE1-211ENST00000605457 NFIXQ14938 502 aa18.42■□□□□ 0.54
TUBE1-211ENST00000605457 PROSER3Q2NL68 480 aa18.42■□□□□ 0.54
TUBE1-211ENST00000605457 KLHL34Q8N239 644 aa18.42■□□□□ 0.54
TUBE1-211ENST00000605457 SPINK5Q9NQ38 1064 aaPredicted RBP18.42■□□□□ 0.54
TUBE1-211ENST00000605457 C10orf71Q711Q0 1435 aa18.42■□□□□ 0.54
TUBE1-211ENST00000605457 N4BP2Q86UW6 1770 aaPredicted RBP18.42■□□□□ 0.54
TUBE1-211ENST00000605457 POLRMTO00411 1230 aaKnown RBP18.41■□□□□ 0.54
TUBE1-211ENST00000605457 PARP3Q9Y6F1 533 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms