RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 GIGYF1O75420 1035 aaPredicted RBP20.25■□□□□ 0.83
CDCA3-211ENST00000603043 CASZ1Q86V15 1759 aa20.25■□□□□ 0.83
CDCA3-211ENST00000603043 ZNF521Q96K83 1311 aa20.25■□□□□ 0.83
CDCA3-211ENST00000603043 PNPLA7Q6ZV29 1317 aa20.24■□□□□ 0.83
CDCA3-211ENST00000603043 CCDC87Q9NVE4 849 aa20.24■□□□□ 0.83
CDCA3-211ENST00000603043 USP16Q9Y5T5 823 aa20.24■□□□□ 0.83
CDCA3-211ENST00000603043 INTS5Q6P9B9 1019 aaKnown RBP20.23■□□□□ 0.83
CDCA3-211ENST00000603043 AMIGO3Q86WK7 504 aa20.23■□□□□ 0.83
CDCA3-211ENST00000603043 PHF14O94880 888 aa20.23■□□□□ 0.83
CDCA3-211ENST00000603043 RTCBQ9Y3I0 505 aaKnown RBP20.23■□□□□ 0.83
CDCA3-211ENST00000603043 SSFA2P28290 1259 aa20.22■□□□□ 0.83
CDCA3-211ENST00000603043 TSR2Q969E8 191 aaKnown RBP20.22■□□□□ 0.83
CDCA3-211ENST00000603043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.21■□□□□ 0.83
CDCA3-211ENST00000603043 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
CDCA3-211ENST00000603043 FLAD1Q8NFF5 587 aa20.21■□□□□ 0.83
CDCA3-211ENST00000603043 PDGFDQ9GZP0 370 aaPredicted RBP20.21■□□□□ 0.83
CDCA3-211ENST00000603043 ZBTB1Q9Y2K1 713 aa20.21■□□□□ 0.83
CDCA3-211ENST00000603043 RPS6KA4O75676 772 aa20.21■□□□□ 0.83
CDCA3-211ENST00000603043 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
CDCA3-211ENST00000603043 C4AP0C0L4 1744 aa20.2■□□□□ 0.82
CDCA3-211ENST00000603043 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
CDCA3-211ENST00000603043 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
CDCA3-211ENST00000603043 COL23A1Q86Y22 540 aaPredicted RBP20.19■□□□□ 0.82
CDCA3-211ENST00000603043 SPINK5Q9NQ38 1064 aaPredicted RBP20.19■□□□□ 0.82
CDCA3-211ENST00000603043 FANCIQ9NVI1 1328 aa20.19■□□□□ 0.82
CDCA3-211ENST00000603043 MSH5O43196 834 aa20.19■□□□□ 0.82
CDCA3-211ENST00000603043 A1BGP04217 495 aa20.19■□□□□ 0.82
CDCA3-211ENST00000603043 CENPBP07199 599 aaPredicted RBP20.18■□□□□ 0.82
CDCA3-211ENST00000603043 ADRA2BP18089 450 aa20.18■□□□□ 0.82
CDCA3-211ENST00000603043 GOLGA2Q08379 1002 aa20.18■□□□□ 0.82
CDCA3-211ENST00000603043 TRAPPC3LQ5T215 181 aa20.18■□□□□ 0.82
CDCA3-211ENST00000603043 SOS1Q07889 1333 aaPredicted RBP20.18■□□□□ 0.82
CDCA3-211ENST00000603043 MYH16Q9H6N6 1097 aa20.17■□□□□ 0.82
CDCA3-211ENST00000603043 HOXB7P09629 217 aa20.17■□□□□ 0.82
CDCA3-211ENST00000603043 DUSP27Q5VZP5 1158 aa20.17■□□□□ 0.82
CDCA3-211ENST00000603043 COL15A1P39059 1388 aa20.16■□□□□ 0.82
CDCA3-211ENST00000603043 EIF2S2P20042 333 aaKnown RBP20.16■□□□□ 0.82
CDCA3-211ENST00000603043 PIP4K2AP48426 406 aaPredicted RBP20.15■□□□□ 0.82
CDCA3-211ENST00000603043 C8orf58Q8NAV2 365 aa20.15■□□□□ 0.82
CDCA3-211ENST00000603043 ARHGEF1Q92888 912 aaKnown RBP20.15■□□□□ 0.82
CDCA3-211ENST00000603043 ZNF330Q9Y3S2 320 aaPredicted RBP20.15■□□□□ 0.82
CDCA3-211ENST00000603043 ELL2O00472 640 aaPredicted RBP20.15■□□□□ 0.82
CDCA3-211ENST00000603043 IL6STP40189 918 aaPredicted RBP20.15■□□□□ 0.82
CDCA3-211ENST00000603043 EIF5P55010 431 aaKnown RBP20.15■□□□□ 0.82
CDCA3-211ENST00000603043 E9PSI1 815 aa20.14■□□□□ 0.81
CDCA3-211ENST00000603043 ZBTB7AO95365 584 aa20.14■□□□□ 0.81
CDCA3-211ENST00000603043 RFC4P35249 363 aa20.14■□□□□ 0.81
CDCA3-211ENST00000603043 SLC16A10Q8TF71 515 aa20.14■□□□□ 0.81
CDCA3-211ENST00000603043 NBPF26B4DH59 902 aa20.14■□□□□ 0.81
CDCA3-211ENST00000603043 NBPF10Q6P3W6 841 aaKnown RBP20.14■□□□□ 0.81
CDCA3-211ENST00000603043 NPM2Q86SE8 214 aaKnown RBP20.14■□□□□ 0.81
CDCA3-211ENST00000603043 NBPF15Q8N660 670 aa20.14■□□□□ 0.81
CDCA3-211ENST00000603043 ERBB4Q15303 1308 aa20.13■□□□□ 0.81
CDCA3-211ENST00000603043 HDGFL1Q5TGJ6 251 aa20.13■□□□□ 0.81
CDCA3-211ENST00000603043 TSPYL6Q8N831 410 aa20.13■□□□□ 0.81
CDCA3-211ENST00000603043 NECTIN2Q92692 538 aa20.13■□□□□ 0.81
CDCA3-211ENST00000603043 MTFR1LQ9H019 292 aa20.12■□□□□ 0.81
CDCA3-211ENST00000603043 SLFN5Q08AF3 891 aa20.12■□□□□ 0.81
CDCA3-211ENST00000603043 CDCA7LQ96GN5 454 aa20.12■□□□□ 0.81
CDCA3-211ENST00000603043 EXOSC9Q06265 439 aaKnown RBP20.11■□□□□ 0.81
CDCA3-211ENST00000603043 TWISTNBQ3B726 338 aaPredicted RBP20.11■□□□□ 0.81
CDCA3-211ENST00000603043 SRCAPQ6ZRS2 3230 aa20.11■□□□□ 0.81
CDCA3-211ENST00000603043 COL24A1Q17RW2 1714 aa20.11■□□□□ 0.81
CDCA3-211ENST00000603043 A0A087WZG4 1122 aa20.1■□□□□ 0.81
CDCA3-211ENST00000603043 MYL6BP14649 208 aa20.1■□□□□ 0.81
CDCA3-211ENST00000603043 USP42Q9H9J4 1324 aaKnown RBP20.1■□□□□ 0.81
CDCA3-211ENST00000603043 ATF5Q9Y2D1 282 aaPredicted RBP20.1■□□□□ 0.81
CDCA3-211ENST00000603043 ZBED9Q6R2W3 1325 aa20.1■□□□□ 0.81
CDCA3-211ENST00000603043 SCN7AQ01118 1682 aa20.09■□□□□ 0.81
CDCA3-211ENST00000603043 ZPR1O75312 459 aa20.09■□□□□ 0.81
CDCA3-211ENST00000603043 PDIA6Q15084 440 aa20.09■□□□□ 0.81
CDCA3-211ENST00000603043 ARXQ96QS3 562 aa20.09■□□□□ 0.81
CDCA3-211ENST00000603043 SPON1Q9HCB6 807 aa20.09■□□□□ 0.81
CDCA3-211ENST00000603043 CHPF2Q9P2E5 772 aa20.09■□□□□ 0.81
CDCA3-211ENST00000603043 SRP68Q9UHB9 627 aaKnown RBP20.09■□□□□ 0.81
CDCA3-211ENST00000603043 BCORQ6W2J9 1755 aa20.09■□□□□ 0.81
CDCA3-211ENST00000603043 MSL1Q68DK7 614 aa20.08■□□□□ 0.81
CDCA3-211ENST00000603043 CHMP4AQ9BY43 222 aa20.08■□□□□ 0.81
CDCA3-211ENST00000603043 NARFQ9UHQ1 456 aa20.08■□□□□ 0.81
CDCA3-211ENST00000603043 LRP5O75197 1615 aa20.08■□□□□ 0.8
CDCA3-211ENST00000603043 PROSER3Q2NL68 480 aa20.08■□□□□ 0.8
CDCA3-211ENST00000603043 DDX21Q9NR30 783 aaKnown RBP eCLIP20.08■□□□□ 0.8
CDCA3-211ENST00000603043 DBF4Q9UBU7 674 aaPredicted RBP20.08■□□□□ 0.8
CDCA3-211ENST00000603043 TBC1D2BQ9UPU7 963 aa20.08■□□□□ 0.8
CDCA3-211ENST00000603043 ANXA1P04083 346 aa20.07■□□□□ 0.8
CDCA3-211ENST00000603043 GYS1P13807 737 aa20.07■□□□□ 0.8
CDCA3-211ENST00000603043 USPL1Q5W0Q7 1092 aa20.07■□□□□ 0.8
CDCA3-211ENST00000603043 DZIP3Q86Y13 1208 aaKnown RBP20.07■□□□□ 0.8
CDCA3-211ENST00000603043 CCDC30Q5VVM6 783 aa20.06■□□□□ 0.8
CDCA3-211ENST00000603043 TRMT2AQ8IZ69 625 aaKnown RBP20.06■□□□□ 0.8
CDCA3-211ENST00000603043 GTF3C3Q9Y5Q9 886 aa20.06■□□□□ 0.8
CDCA3-211ENST00000603043 LRP10Q7Z4F1 713 aa20.06■□□□□ 0.8
CDCA3-211ENST00000603043 CACNA1FO60840 1977 aa20.05■□□□□ 0.8
CDCA3-211ENST00000603043 VAMP4O75379 141 aa20.05■□□□□ 0.8
CDCA3-211ENST00000603043 NLGN1Q8N2Q7 840 aa20.04■□□□□ 0.8
CDCA3-211ENST00000603043 CAMTA2O94983 1202 aa20.04■□□□□ 0.8
CDCA3-211ENST00000603043 PTGER2P43116 358 aa20.04■□□□□ 0.8
CDCA3-211ENST00000603043 POLD1P28340 1107 aa20.03■□□□□ 0.8
CDCA3-211ENST00000603043 FKBP8Q14318 412 aa20.03■□□□□ 0.8
CDCA3-211ENST00000603043 SGIP1Q9BQI5 828 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms