RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 KIF13BQ9NQT8 1826 aa22.13■■□□□ 1.13
SNRPA-210ENST00000601393 FHDC1Q9C0D6 1143 aaPredicted RBP22.13■■□□□ 1.13
SNRPA-210ENST00000601393 TRIM35Q9UPQ4 493 aa22.13■■□□□ 1.13
SNRPA-210ENST00000601393 RRP7AQ9Y3A4 280 aaKnown RBP22.13■■□□□ 1.13
SNRPA-210ENST00000601393 LMOD3Q0VAK6 560 aa22.12■■□□□ 1.13
SNRPA-210ENST00000601393 PNISRQ8TF01 805 aaKnown RBP22.12■■□□□ 1.13
SNRPA-210ENST00000601393 TEX13AQ9BXU3 409 aaPredicted RBP22.12■■□□□ 1.13
SNRPA-210ENST00000601393 MIS18AQ9NYP9 233 aa22.12■■□□□ 1.13
SNRPA-210ENST00000601393 COL15A1P39059 1388 aa22.12■■□□□ 1.13
SNRPA-210ENST00000601393 USP42Q9H9J4 1324 aaKnown RBP22.11■■□□□ 1.13
SNRPA-210ENST00000601393 GYS1P13807 737 aa22.11■■□□□ 1.13
SNRPA-210ENST00000601393 SYT17Q9BSW7 474 aa22.11■■□□□ 1.13
SNRPA-210ENST00000601393 BCORQ6W2J9 1755 aa22.11■■□□□ 1.13
SNRPA-210ENST00000601393 PRAMEF22A3QJZ6 481 aa22.1■■□□□ 1.13
SNRPA-210ENST00000601393 STARD3NLO95772 234 aa22.1■■□□□ 1.13
SNRPA-210ENST00000601393 KIAA1551Q9HCM1 1747 aa22.09■■□□□ 1.13
SNRPA-210ENST00000601393 RFC4P35249 363 aa22.09■■□□□ 1.13
SNRPA-210ENST00000601393 EIF5P55010 431 aaKnown RBP22.09■■□□□ 1.13
SNRPA-210ENST00000601393 USP16Q9Y5T5 823 aa22.09■■□□□ 1.13
SNRPA-210ENST00000601393 SNRPA1P09661 255 aaKnown RBP22.08■■□□□ 1.13
SNRPA-210ENST00000601393 MRS2Q9HD23 443 aa22.08■■□□□ 1.13
SNRPA-210ENST00000601393 SRP68Q9UHB9 627 aaKnown RBP22.08■■□□□ 1.13
SNRPA-210ENST00000601393 EIF4A1P60842 406 aaKnown RBP22.07■■□□□ 1.12
SNRPA-210ENST00000601393 NEUROD2Q15784 382 aa22.07■■□□□ 1.12
SNRPA-210ENST00000601393 BABAM1Q9NWV8 329 aa22.07■■□□□ 1.12
SNRPA-210ENST00000601393 NRXN2Q9P2S2 1712 aa22.06■■□□□ 1.12
SNRPA-210ENST00000601393 APAF1O14727 1248 aa22.06■■□□□ 1.12
SNRPA-210ENST00000601393 A1BGP04217 495 aa22.06■■□□□ 1.12
SNRPA-210ENST00000601393 CANXP27824 592 aaKnown RBP22.06■■□□□ 1.12
SNRPA-210ENST00000601393 NLGN1Q8N2Q7 840 aa22.06■■□□□ 1.12
SNRPA-210ENST00000601393 AFDNP55196 1824 aaKnown RBP22.06■■□□□ 1.12
SNRPA-210ENST00000601393 IL6STP40189 918 aaPredicted RBP22.05■■□□□ 1.12
SNRPA-210ENST00000601393 NARFQ9UHQ1 456 aa22.05■■□□□ 1.12
SNRPA-210ENST00000601393 GIGYF1O75420 1035 aaPredicted RBP22.04■■□□□ 1.12
SNRPA-210ENST00000601393 MMP10P09238 476 aa22.04■■□□□ 1.12
SNRPA-210ENST00000601393 BCL2L12Q9HB09 334 aa22.04■■□□□ 1.12
SNRPA-210ENST00000601393 FKBP8Q14318 412 aa22.03■■□□□ 1.12
SNRPA-210ENST00000601393 TSPYL4Q9UJ04 414 aa22.03■■□□□ 1.12
SNRPA-210ENST00000601393 CHL1O00533 1208 aa22.02■■□□□ 1.12
SNRPA-210ENST00000601393 USPL1Q5W0Q7 1092 aa22.02■■□□□ 1.12
SNRPA-210ENST00000601393 C10orf71Q711Q0 1435 aa22.02■■□□□ 1.12
SNRPA-210ENST00000601393 NBPF26B4DH59 902 aa22.01■■□□□ 1.11
SNRPA-210ENST00000601393 NBPF10Q6P3W6 841 aaKnown RBP22.01■■□□□ 1.11
SNRPA-210ENST00000601393 NBPF15Q8N660 670 aa22.01■■□□□ 1.11
SNRPA-210ENST00000601393 NLGN2Q8NFZ4 835 aa22.01■■□□□ 1.11
SNRPA-210ENST00000601393 CD2APQ9Y5K6 639 aa22.01■■□□□ 1.11
SNRPA-210ENST00000601393 TM4SF1P30408 202 aa22■■□□□ 1.11
SNRPA-210ENST00000601393 DDR1Q08345 913 aa22■■□□□ 1.11
SNRPA-210ENST00000601393 BRCA1P38398 1863 aaKnown RBP21.99■■□□□ 1.11
SNRPA-210ENST00000601393 A0A087WZG4 1122 aa21.99■■□□□ 1.11
SNRPA-210ENST00000601393 ZPR1O75312 459 aa21.99■■□□□ 1.11
SNRPA-210ENST00000601393 N4BP2Q86UW6 1770 aaPredicted RBP21.98■■□□□ 1.11
SNRPA-210ENST00000601393 ZNF853P0CG23 659 aa21.98■■□□□ 1.11
SNRPA-210ENST00000601393 PIP4K2AP48426 406 aaPredicted RBP21.98■■□□□ 1.11
SNRPA-210ENST00000601393 GOLGB1Q14789 3259 aaKnown RBP21.97■■□□□ 1.11
SNRPA-210ENST00000601393 KLHL34Q8N239 644 aa21.97■■□□□ 1.11
SNRPA-210ENST00000601393 CFAP44Q96MT7 982 aa21.97■■□□□ 1.11
SNRPA-210ENST00000601393 UTRNP46939 3433 aa21.97■■□□□ 1.11
SNRPA-210ENST00000601393 POLRMTO00411 1230 aaKnown RBP21.96■■□□□ 1.11
SNRPA-210ENST00000601393 CAMTA2O94983 1202 aa21.96■■□□□ 1.11
SNRPA-210ENST00000601393 NCBP3Q53F19 620 aaKnown RBP21.96■■□□□ 1.11
SNRPA-210ENST00000601393 NUP98P52948 1817 aa21.95■■□□□ 1.1
SNRPA-210ENST00000601393 NFIXQ14938 502 aa21.95■■□□□ 1.1
SNRPA-210ENST00000601393 CCDC27Q2M243 656 aa21.95■■□□□ 1.1
SNRPA-210ENST00000601393 TBC1D2BQ9UPU7 963 aa21.95■■□□□ 1.1
SNRPA-210ENST00000601393 PXDNLA1KZ92 1463 aa21.95■■□□□ 1.1
SNRPA-210ENST00000601393 PARP3Q9Y6F1 533 aa21.94■■□□□ 1.1
SNRPA-210ENST00000601393 ERBB4Q15303 1308 aa21.94■■□□□ 1.1
SNRPA-210ENST00000601393 ANKRD31Q8N7Z5 1873 aa21.94■■□□□ 1.1
SNRPA-210ENST00000601393 KRT24Q2M2I5 525 aa21.93■■□□□ 1.1
SNRPA-210ENST00000601393 DZIP3Q86Y13 1208 aaKnown RBP21.93■■□□□ 1.1
SNRPA-210ENST00000601393 IFT57Q9NWB7 429 aa21.93■■□□□ 1.1
SNRPA-210ENST00000601393 DLEC1Q9Y238 1755 aa21.93■■□□□ 1.1
SNRPA-210ENST00000601393 ZNF330Q9Y3S2 320 aaPredicted RBP21.93■■□□□ 1.1
SNRPA-210ENST00000601393 CHD4Q14839 1912 aa21.92■■□□□ 1.1
SNRPA-210ENST00000601393 LRP10Q7Z4F1 713 aa21.92■■□□□ 1.1
SNRPA-210ENST00000601393 MBIPQ9NS73 344 aa21.92■■□□□ 1.1
SNRPA-210ENST00000601393 RGL2O15211 777 aa21.91■■□□□ 1.1
SNRPA-210ENST00000601393 PDIA6Q15084 440 aa21.91■■□□□ 1.1
SNRPA-210ENST00000601393 LAS1LQ9Y4W2 734 aaKnown RBP21.91■■□□□ 1.1
SNRPA-210ENST00000601393 CALD1Q05682 793 aaKnown RBP21.9■■□□□ 1.1
SNRPA-210ENST00000601393 TBC1D9BQ66K14 1250 aa21.9■■□□□ 1.1
SNRPA-210ENST00000601393 WWC1Q8IX03 1113 aa21.9■■□□□ 1.1
SNRPA-210ENST00000601393 HOXB7P09629 217 aa21.89■■□□□ 1.09
SNRPA-210ENST00000601393 GNAI1P63096 354 aa21.89■■□□□ 1.09
SNRPA-210ENST00000601393 SENP3-EIF4A1A0A087X0R7 540 aa21.88■■□□□ 1.09
SNRPA-210ENST00000601393 ANKRD36CQ5JPF3 1778 aa21.88■■□□□ 1.09
SNRPA-210ENST00000601393 ARFGEF1Q9Y6D6 1849 aa21.87■■□□□ 1.09
SNRPA-210ENST00000601393 YBX3P16989 372 aaKnown RBP eCLIP21.87■■□□□ 1.09
SNRPA-210ENST00000601393 TGFB2P61812 414 aa21.87■■□□□ 1.09
SNRPA-210ENST00000601393 CLEC4GQ6UXB4 293 aa21.87■■□□□ 1.09
SNRPA-210ENST00000601393 NPM2Q86SE8 214 aaKnown RBP21.87■■□□□ 1.09
SNRPA-210ENST00000601393 FAM9BQ8IZU0 186 aa21.87■■□□□ 1.09
SNRPA-210ENST00000601393 CARMIL3Q8ND23 1372 aa21.87■■□□□ 1.09
SNRPA-210ENST00000601393 COL11A2P13942 1736 aaPredicted RBP21.86■■□□□ 1.09
SNRPA-210ENST00000601393 SERPINB2P05120 415 aa21.86■■□□□ 1.09
SNRPA-210ENST00000601393 PROSER3Q2NL68 480 aa21.86■■□□□ 1.09
SNRPA-210ENST00000601393 IL16Q14005 1332 aa21.85■■□□□ 1.09
SNRPA-210ENST00000601393 EIF2S2P20042 333 aaKnown RBP21.85■■□□□ 1.09
SNRPA-210ENST00000601393 TTLL7Q6ZT98 887 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms