RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-205ENST00000601194 NEUROD2Q15784 382 aa18.79■□□□□ 0.6
PSMC4-205ENST00000601194 TEX13AQ9BXU3 409 aaPredicted RBP18.79■□□□□ 0.6
PSMC4-205ENST00000601194 TRIM35Q9UPQ4 493 aa18.79■□□□□ 0.6
PSMC4-205ENST00000601194 ZBTB1Q9Y2K1 713 aa18.79■□□□□ 0.6
PSMC4-205ENST00000601194 SOS1Q07889 1333 aaPredicted RBP18.78■□□□□ 0.6
PSMC4-205ENST00000601194 KDM3BQ7LBC6 1761 aa18.78■□□□□ 0.6
PSMC4-205ENST00000601194 C4AP0C0L4 1744 aa18.77■□□□□ 0.59
PSMC4-205ENST00000601194 APAF1O14727 1248 aa18.76■□□□□ 0.59
PSMC4-205ENST00000601194 SNRPA1P09661 255 aaKnown RBP18.76■□□□□ 0.59
PSMC4-205ENST00000601194 RFC4P35249 363 aa18.76■□□□□ 0.59
PSMC4-205ENST00000601194 FHDC1Q9C0D6 1143 aaPredicted RBP18.76■□□□□ 0.59
PSMC4-205ENST00000601194 PRAMEF22A3QJZ6 481 aa18.75■□□□□ 0.59
PSMC4-205ENST00000601194 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
PSMC4-205ENST00000601194 COL15A1P39059 1388 aa18.74■□□□□ 0.59
PSMC4-205ENST00000601194 GYS1P13807 737 aa18.74■□□□□ 0.59
PSMC4-205ENST00000601194 BABAM1Q9NWV8 329 aa18.74■□□□□ 0.59
PSMC4-205ENST00000601194 CANXP27824 592 aaKnown RBP18.73■□□□□ 0.59
PSMC4-205ENST00000601194 EIF5P55010 431 aaKnown RBP18.73■□□□□ 0.59
PSMC4-205ENST00000601194 EIF4A1P60842 406 aaKnown RBP18.73■□□□□ 0.59
PSMC4-205ENST00000601194 SYT17Q9BSW7 474 aa18.73■□□□□ 0.59
PSMC4-205ENST00000601194 SRP68Q9UHB9 627 aaKnown RBP18.73■□□□□ 0.59
PSMC4-205ENST00000601194 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
PSMC4-205ENST00000601194 USP16Q9Y5T5 823 aa18.73■□□□□ 0.59
PSMC4-205ENST00000601194 A1BGP04217 495 aa18.72■□□□□ 0.59
PSMC4-205ENST00000601194 NLGN1Q8N2Q7 840 aa18.72■□□□□ 0.59
PSMC4-205ENST00000601194 GIGYF1O75420 1035 aaPredicted RBP18.71■□□□□ 0.59
PSMC4-205ENST00000601194 CHL1O00533 1208 aa18.7■□□□□ 0.58
PSMC4-205ENST00000601194 MMP10P09238 476 aa18.7■□□□□ 0.58
PSMC4-205ENST00000601194 IL6STP40189 918 aaPredicted RBP18.7■□□□□ 0.58
PSMC4-205ENST00000601194 ZPR1O75312 459 aa18.69■□□□□ 0.58
PSMC4-205ENST00000601194 FKBP8Q14318 412 aa18.69■□□□□ 0.58
PSMC4-205ENST00000601194 NARFQ9UHQ1 456 aa18.69■□□□□ 0.58
PSMC4-205ENST00000601194 LAMB4A4D0S4 1761 aa18.68■□□□□ 0.58
PSMC4-205ENST00000601194 USPL1Q5W0Q7 1092 aa18.68■□□□□ 0.58
PSMC4-205ENST00000601194 KLHL34Q8N239 644 aa18.68■□□□□ 0.58
PSMC4-205ENST00000601194 A0A087WZG4 1122 aa18.67■□□□□ 0.58
PSMC4-205ENST00000601194 NBPF26B4DH59 902 aa18.67■□□□□ 0.58
PSMC4-205ENST00000601194 PIP4K2AP48426 406 aaPredicted RBP18.67■□□□□ 0.58
PSMC4-205ENST00000601194 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
PSMC4-205ENST00000601194 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
PSMC4-205ENST00000601194 ZNF330Q9Y3S2 320 aaPredicted RBP18.67■□□□□ 0.58
PSMC4-205ENST00000601194 CFAP44Q96MT7 982 aa18.66■□□□□ 0.58
PSMC4-205ENST00000601194 BCL2L12Q9HB09 334 aa18.66■□□□□ 0.58
PSMC4-205ENST00000601194 LAS1LQ9Y4W2 734 aaKnown RBP18.66■□□□□ 0.58
PSMC4-205ENST00000601194 GOLGB1Q14789 3259 aaKnown RBP18.66■□□□□ 0.58
PSMC4-205ENST00000601194 ZNF853P0CG23 659 aa18.65■□□□□ 0.58
PSMC4-205ENST00000601194 CALD1Q05682 793 aaKnown RBP18.65■□□□□ 0.58
PSMC4-205ENST00000601194 CCDC27Q2M243 656 aa18.65■□□□□ 0.58
PSMC4-205ENST00000601194 NLGN2Q8NFZ4 835 aa18.65■□□□□ 0.58
PSMC4-205ENST00000601194 CD2APQ9Y5K6 639 aa18.65■□□□□ 0.58
PSMC4-205ENST00000601194 SCN7AQ01118 1682 aa18.64■□□□□ 0.57
PSMC4-205ENST00000601194 SENP3-EIF4A1A0A087X0R7 540 aa18.64■□□□□ 0.57
PSMC4-205ENST00000601194 DDR1Q08345 913 aa18.64■□□□□ 0.57
PSMC4-205ENST00000601194 NCBP3Q53F19 620 aaKnown RBP18.64■□□□□ 0.57
PSMC4-205ENST00000601194 FAM9BQ8IZU0 186 aa18.64■□□□□ 0.57
PSMC4-205ENST00000601194 IFT57Q9NWB7 429 aa18.64■□□□□ 0.57
PSMC4-205ENST00000601194 TBC1D2BQ9UPU7 963 aa18.64■□□□□ 0.57
PSMC4-205ENST00000601194 TM4SF1P30408 202 aa18.63■□□□□ 0.57
PSMC4-205ENST00000601194 KRT24Q2M2I5 525 aa18.63■□□□□ 0.57
PSMC4-205ENST00000601194 NPM2Q86SE8 214 aaKnown RBP18.63■□□□□ 0.57
PSMC4-205ENST00000601194 PARP3Q9Y6F1 533 aa18.63■□□□□ 0.57
PSMC4-205ENST00000601194 UTRNP46939 3433 aa18.63■□□□□ 0.57
PSMC4-205ENST00000601194 CAMTA2O94983 1202 aa18.62■□□□□ 0.57
PSMC4-205ENST00000601194 NFIXQ14938 502 aa18.62■□□□□ 0.57
PSMC4-205ENST00000601194 DZIP3Q86Y13 1208 aaKnown RBP18.62■□□□□ 0.57
PSMC4-205ENST00000601194 WWC1Q8IX03 1113 aa18.62■□□□□ 0.57
PSMC4-205ENST00000601194 MBIPQ9NS73 344 aa18.62■□□□□ 0.57
PSMC4-205ENST00000601194 C10orf71Q711Q0 1435 aa18.62■□□□□ 0.57
PSMC4-205ENST00000601194 ERBB4Q15303 1308 aa18.61■□□□□ 0.57
PSMC4-205ENST00000601194 POLRMTO00411 1230 aaKnown RBP18.61■□□□□ 0.57
PSMC4-205ENST00000601194 GNAI1P63096 354 aa18.61■□□□□ 0.57
PSMC4-205ENST00000601194 CCER2I3L3R5 266 aa18.59■□□□□ 0.57
PSMC4-205ENST00000601194 BCORQ6W2J9 1755 aa18.59■□□□□ 0.57
PSMC4-205ENST00000601194 HOXB7P09629 217 aa18.58■□□□□ 0.56
PSMC4-205ENST00000601194 EIF2S2P20042 333 aaKnown RBP18.58■□□□□ 0.56
PSMC4-205ENST00000601194 PDIA6Q15084 440 aa18.58■□□□□ 0.56
PSMC4-205ENST00000601194 TBC1D9BQ66K14 1250 aa18.58■□□□□ 0.56
PSMC4-205ENST00000601194 LRP10Q7Z4F1 713 aa18.58■□□□□ 0.56
PSMC4-205ENST00000601194 KIF13BQ9NQT8 1826 aa18.58■□□□□ 0.56
PSMC4-205ENST00000601194 RGL2O15211 777 aa18.57■□□□□ 0.56
PSMC4-205ENST00000601194 MYL6BP14649 208 aa18.57■□□□□ 0.56
PSMC4-205ENST00000601194 DIEXFQ68CQ4 756 aaKnown RBP18.57■□□□□ 0.56
PSMC4-205ENST00000601194 IL16Q14005 1332 aa18.56■□□□□ 0.56
PSMC4-205ENST00000601194 DCAF8L1A6NGE4 600 aa18.56■□□□□ 0.56
PSMC4-205ENST00000601194 PROSER3Q2NL68 480 aa18.56■□□□□ 0.56
PSMC4-205ENST00000601194 DUSP27Q5VZP5 1158 aa18.56■□□□□ 0.56
PSMC4-205ENST00000601194 CLEC4GQ6UXB4 293 aa18.56■□□□□ 0.56
PSMC4-205ENST00000601194 BICDL1Q6ZP65 573 aa18.56■□□□□ 0.56
PSMC4-205ENST00000601194 PXDNLA1KZ92 1463 aa18.56■□□□□ 0.56
PSMC4-205ENST00000601194 NRXN2Q9P2S2 1712 aa18.55■□□□□ 0.56
PSMC4-205ENST00000601194 SERPINB2P05120 415 aa18.55■□□□□ 0.56
PSMC4-205ENST00000601194 TTLL7Q6ZT98 887 aa18.55■□□□□ 0.56
PSMC4-205ENST00000601194 NGEFQ8N5V2 710 aa18.55■□□□□ 0.56
PSMC4-205ENST00000601194 NECTIN2Q92692 538 aa18.55■□□□□ 0.56
PSMC4-205ENST00000601194 ZNF652Q9Y2D9 606 aa18.55■□□□□ 0.56
PSMC4-205ENST00000601194 SALL2Q9Y467 1007 aaPredicted RBP18.55■□□□□ 0.56
PSMC4-205ENST00000601194 CARMIL3Q8ND23 1372 aa18.55■□□□□ 0.56
PSMC4-205ENST00000601194 KIAA1551Q9HCM1 1747 aa18.54■□□□□ 0.56
PSMC4-205ENST00000601194 TGFB2P61812 414 aa18.54■□□□□ 0.56
PSMC4-205ENST00000601194 HDGFL1Q5TGJ6 251 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms