RNA–Protein interactions for RNA: ENST00000600610.5

GTPBP3-221, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 1 (best)

Gene GTPBP3, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-221ENST00000600610 SOS1Q07889 1333 aaPredicted RBP26.9■■□□□ 1.9
GTPBP3-221ENST00000600610 UBR3Q6ZT12 1888 aa26.9■■□□□ 1.9
GTPBP3-221ENST00000600610 LAS1LQ9Y4W2 734 aaKnown RBP26.9■■□□□ 1.9
GTPBP3-221ENST00000600610 MYH14Q7Z406 1995 aaKnown RBP26.89■■□□□ 1.9
GTPBP3-221ENST00000600610 HOXB7P09629 217 aa26.89■■□□□ 1.9
GTPBP3-221ENST00000600610 MBIPQ9NS73 344 aa26.89■■□□□ 1.9
GTPBP3-221ENST00000600610 SALL2Q9Y467 1007 aaPredicted RBP26.89■■□□□ 1.9
GTPBP3-221ENST00000600610 GIGYF1O75420 1035 aaPredicted RBP26.88■■□□□ 1.89
GTPBP3-221ENST00000600610 MYH16Q9H6N6 1097 aa26.88■■□□□ 1.89
GTPBP3-221ENST00000600610 GOLGA2Q08379 1002 aa26.87■■□□□ 1.89
GTPBP3-221ENST00000600610 COL23A1Q86Y22 540 aaPredicted RBP26.87■■□□□ 1.89
GTPBP3-221ENST00000600610 DNAJC10Q8IXB1 793 aa26.87■■□□□ 1.89
GTPBP3-221ENST00000600610 CYP19A1P11511 503 aaPredicted RBP26.86■■□□□ 1.89
GTPBP3-221ENST00000600610 SSFA2P28290 1259 aa26.86■■□□□ 1.89
GTPBP3-221ENST00000600610 COL24A1Q17RW2 1714 aa26.86■■□□□ 1.89
GTPBP3-221ENST00000600610 ATF5Q9Y2D1 282 aaPredicted RBP26.86■■□□□ 1.89
GTPBP3-221ENST00000600610 PTGER2P43116 358 aa26.85■■□□□ 1.89
GTPBP3-221ENST00000600610 E9PSI1 815 aa26.83■■□□□ 1.89
GTPBP3-221ENST00000600610 ADRA2BP18089 450 aa26.83■■□□□ 1.89
GTPBP3-221ENST00000600610 HNRNPUQ00839 825 aaKnown RBP eCLIP26.83■■□□□ 1.89
GTPBP3-221ENST00000600610 SGIP1Q9BQI5 828 aa26.83■■□□□ 1.89
GTPBP3-221ENST00000600610 CCDC87Q9NVE4 849 aa26.83■■□□□ 1.89
GTPBP3-221ENST00000600610 PPP1R1BQ9UD71 204 aaPredicted RBP26.83■■□□□ 1.89
GTPBP3-221ENST00000600610 CACNA1FO60840 1977 aa26.83■■□□□ 1.89
GTPBP3-221ENST00000600610 ERBB4Q15303 1308 aa26.83■■□□□ 1.89
GTPBP3-221ENST00000600610 GNPATO15228 680 aa26.82■■□□□ 1.88
GTPBP3-221ENST00000600610 MSH5O43196 834 aa26.82■■□□□ 1.88
GTPBP3-221ENST00000600610 RPS6KA4O75676 772 aa26.82■■□□□ 1.88
GTPBP3-221ENST00000600610 CRKLP46109 303 aaKnown RBP26.82■■□□□ 1.88
GTPBP3-221ENST00000600610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.81■■□□□ 1.88
GTPBP3-221ENST00000600610 RTCBQ9Y3I0 505 aaKnown RBP26.81■■□□□ 1.88
GTPBP3-221ENST00000600610 SENP3-EIF4A1A0A087X0R7 540 aa26.8■■□□□ 1.88
GTPBP3-221ENST00000600610 USP16Q9Y5T5 823 aa26.8■■□□□ 1.88
GTPBP3-221ENST00000600610 INTS5Q6P9B9 1019 aaKnown RBP26.79■■□□□ 1.88
GTPBP3-221ENST00000600610 ZBED9Q6R2W3 1325 aa26.79■■□□□ 1.88
GTPBP3-221ENST00000600610 POLD1P28340 1107 aa26.78■■□□□ 1.88
GTPBP3-221ENST00000600610 TRAPPC3LQ5T215 181 aa26.78■■□□□ 1.88
GTPBP3-221ENST00000600610 AMIGO3Q86WK7 504 aa26.78■■□□□ 1.88
GTPBP3-221ENST00000600610 FANCIQ9NVI1 1328 aa26.78■■□□□ 1.88
GTPBP3-221ENST00000600610 PHF14O94880 888 aa26.77■■□□□ 1.88
GTPBP3-221ENST00000600610 IL6STP40189 918 aaPredicted RBP26.77■■□□□ 1.88
GTPBP3-221ENST00000600610 SLFN5Q08AF3 891 aa26.77■■□□□ 1.88
GTPBP3-221ENST00000600610 DUSP27Q5VZP5 1158 aa26.76■■□□□ 1.87
GTPBP3-221ENST00000600610 A0A087WZG4 1122 aa26.75■■□□□ 1.87
GTPBP3-221ENST00000600610 TRMT2AQ8IZ69 625 aaKnown RBP26.75■■□□□ 1.87
GTPBP3-221ENST00000600610 TSR2Q969E8 191 aaKnown RBP26.75■■□□□ 1.87
GTPBP3-221ENST00000600610 NPM2Q86SE8 214 aaKnown RBP26.74■■□□□ 1.87
GTPBP3-221ENST00000600610 ARXQ96QS3 562 aa26.74■■□□□ 1.87
GTPBP3-221ENST00000600610 SPINK5Q9NQ38 1064 aaPredicted RBP26.74■■□□□ 1.87
GTPBP3-221ENST00000600610 PRAMEF22A3QJZ6 481 aa26.73■■□□□ 1.87
GTPBP3-221ENST00000600610 EIF5P55010 431 aaKnown RBP26.73■■□□□ 1.87
GTPBP3-221ENST00000600610 SMIM5Q71RC9 77 aa26.72■■□□□ 1.87
GTPBP3-221ENST00000600610 ARHGEF1Q92888 912 aaKnown RBP26.72■■□□□ 1.87
GTPBP3-221ENST00000600610 ZBTB1Q9Y2K1 713 aa26.72■■□□□ 1.87
GTPBP3-221ENST00000600610 RGL2O15211 777 aa26.71■■□□□ 1.87
GTPBP3-221ENST00000600610 C8orf58Q8NAV2 365 aa26.71■■□□□ 1.87
GTPBP3-221ENST00000600610 C4AP0C0L4 1744 aa26.7■■□□□ 1.87
GTPBP3-221ENST00000600610 A1BGP04217 495 aa26.7■■□□□ 1.86
GTPBP3-221ENST00000600610 CT47B1P0C2W7 299 aaPredicted RBP26.7■■□□□ 1.86
GTPBP3-221ENST00000600610 TWISTNBQ3B726 338 aaPredicted RBP26.7■■□□□ 1.86
GTPBP3-221ENST00000600610 HDGFL1Q5TGJ6 251 aa26.7■■□□□ 1.86
GTPBP3-221ENST00000600610 ZNF428Q96B54 188 aa26.7■■□□□ 1.86
GTPBP3-221ENST00000600610 CANXP27824 592 aaKnown RBP26.69■■□□□ 1.86
GTPBP3-221ENST00000600610 RFC4P35249 363 aa26.69■■□□□ 1.86
GTPBP3-221ENST00000600610 CCDC30Q5VVM6 783 aa26.69■■□□□ 1.86
GTPBP3-221ENST00000600610 DBF4Q9UBU7 674 aaPredicted RBP26.69■■□□□ 1.86
GTPBP3-221ENST00000600610 COL15A1P39059 1388 aa26.69■■□□□ 1.86
GTPBP3-221ENST00000600610 EIF2S2P20042 333 aaKnown RBP26.68■■□□□ 1.86
GTPBP3-221ENST00000600610 KRT24Q2M2I5 525 aa26.68■■□□□ 1.86
GTPBP3-221ENST00000600610 DDX21Q9NR30 783 aaKnown RBP eCLIP26.68■■□□□ 1.86
GTPBP3-221ENST00000600610 EXOSC9Q06265 439 aaKnown RBP26.67■■□□□ 1.86
GTPBP3-221ENST00000600610 MSL1Q68DK7 614 aa26.67■■□□□ 1.86
GTPBP3-221ENST00000600610 NBPF26B4DH59 902 aa26.66■■□□□ 1.86
GTPBP3-221ENST00000600610 VAMP4O75379 141 aa26.66■■□□□ 1.86
GTPBP3-221ENST00000600610 NBPF10Q6P3W6 841 aaKnown RBP26.66■■□□□ 1.86
GTPBP3-221ENST00000600610 NLGN1Q8N2Q7 840 aa26.66■■□□□ 1.86
GTPBP3-221ENST00000600610 NBPF15Q8N660 670 aa26.66■■□□□ 1.86
GTPBP3-221ENST00000600610 CDCA7LQ96GN5 454 aa26.66■■□□□ 1.86
GTPBP3-221ENST00000600610 NARFQ9UHQ1 456 aa26.66■■□□□ 1.86
GTPBP3-221ENST00000600610 TSPYL6Q8N831 410 aa26.65■■□□□ 1.86
GTPBP3-221ENST00000600610 SYT17Q9BSW7 474 aa26.65■■□□□ 1.86
GTPBP3-221ENST00000600610 FHDC1Q9C0D6 1143 aaPredicted RBP26.65■■□□□ 1.86
GTPBP3-221ENST00000600610 HYPKQ9NX55 129 aa26.65■■□□□ 1.86
GTPBP3-221ENST00000600610 ELL2O00472 640 aaPredicted RBP26.64■■□□□ 1.86
GTPBP3-221ENST00000600610 ZPR1O75312 459 aa26.64■■□□□ 1.86
GTPBP3-221ENST00000600610 PDIA6Q15084 440 aa26.64■■□□□ 1.86
GTPBP3-221ENST00000600610 USP42Q9H9J4 1324 aaKnown RBP26.63■■□□□ 1.85
GTPBP3-221ENST00000600610 GYS1P13807 737 aa26.62■■□□□ 1.85
GTPBP3-221ENST00000600610 STK31Q9BXU1 1019 aa26.62■■□□□ 1.85
GTPBP3-221ENST00000600610 BCORQ6W2J9 1755 aa26.61■■□□□ 1.85
GTPBP3-221ENST00000600610 CLEC4GQ6UXB4 293 aa26.6■■□□□ 1.85
GTPBP3-221ENST00000600610 LRP10Q7Z4F1 713 aa26.6■■□□□ 1.85
GTPBP3-221ENST00000600610 SCN7AQ01118 1682 aa26.6■■□□□ 1.85
GTPBP3-221ENST00000600610 ERVV-1B6SEH8 477 aa26.59■■□□□ 1.85
GTPBP3-221ENST00000600610 DZIP3Q86Y13 1208 aaKnown RBP26.59■■□□□ 1.85
GTPBP3-221ENST00000600610 CHPF2Q9P2E5 772 aa26.59■■□□□ 1.85
GTPBP3-221ENST00000600610 NUP98P52948 1817 aa26.59■■□□□ 1.85
GTPBP3-221ENST00000600610 MYL6BP14649 208 aa26.58■■□□□ 1.85
GTPBP3-221ENST00000600610 KIF6Q6ZMV9 814 aa26.57■■□□□ 1.84
GTPBP3-221ENST00000600610 ZNF652Q9Y2D9 606 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms