RNA–Protein interactions for RNA: ENST00000599839.5

CALM3-212, Transcript of calmodulin 3, humanhuman

TSL 1 (best) BASIC

Gene CALM3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-212ENST00000599839 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
CALM3-212ENST00000599839 CFAP44Q96MT7 982 aa20.57■□□□□ 0.88
CALM3-212ENST00000599839 MBIPQ9NS73 344 aa20.57■□□□□ 0.88
CALM3-212ENST00000599839 BABAM1Q9NWV8 329 aa20.57■□□□□ 0.88
CALM3-212ENST00000599839 ZBTB7AO95365 584 aa20.56■□□□□ 0.88
CALM3-212ENST00000599839 SNRPA1P09661 255 aaKnown RBP20.56■□□□□ 0.88
CALM3-212ENST00000599839 CCDC87Q9NVE4 849 aa20.56■□□□□ 0.88
CALM3-212ENST00000599839 IFT57Q9NWB7 429 aa20.56■□□□□ 0.88
CALM3-212ENST00000599839 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
CALM3-212ENST00000599839 PIP4K2AP48426 406 aaPredicted RBP20.55■□□□□ 0.88
CALM3-212ENST00000599839 SOS1Q07889 1333 aaPredicted RBP20.54■□□□□ 0.88
CALM3-212ENST00000599839 ZNF521Q96K83 1311 aa20.54■□□□□ 0.88
CALM3-212ENST00000599839 RPS6KA4O75676 772 aa20.54■□□□□ 0.88
CALM3-212ENST00000599839 A1BGP04217 495 aa20.54■□□□□ 0.88
CALM3-212ENST00000599839 SSFA2P28290 1259 aa20.54■□□□□ 0.88
CALM3-212ENST00000599839 RTCBQ9Y3I0 505 aaKnown RBP20.54■□□□□ 0.88
CALM3-212ENST00000599839 BCORQ6W2J9 1755 aa20.53■□□□□ 0.88
CALM3-212ENST00000599839 SCN7AQ01118 1682 aa20.53■□□□□ 0.88
CALM3-212ENST00000599839 SPINK5Q9NQ38 1064 aaPredicted RBP20.53■□□□□ 0.88
CALM3-212ENST00000599839 STARD3NLO95772 234 aa20.52■□□□□ 0.88
CALM3-212ENST00000599839 HMGB2P26583 209 aaKnown RBP20.52■□□□□ 0.88
CALM3-212ENST00000599839 CANXP27824 592 aaKnown RBP20.52■□□□□ 0.88
CALM3-212ENST00000599839 GNAI1P63096 354 aa20.52■□□□□ 0.88
CALM3-212ENST00000599839 CALD1Q05682 793 aaKnown RBP20.52■□□□□ 0.88
CALM3-212ENST00000599839 TSR2Q969E8 191 aaKnown RBP20.52■□□□□ 0.88
CALM3-212ENST00000599839 TEX13AQ9BXU3 409 aaPredicted RBP20.52■□□□□ 0.88
CALM3-212ENST00000599839 SRCAPQ6ZRS2 3230 aa20.52■□□□□ 0.88
CALM3-212ENST00000599839 COL15A1P39059 1388 aa20.52■□□□□ 0.87
CALM3-212ENST00000599839 MSH5O43196 834 aa20.51■□□□□ 0.87
CALM3-212ENST00000599839 ARHGEF1Q92888 912 aaKnown RBP20.51■□□□□ 0.87
CALM3-212ENST00000599839 NBPF26B4DH59 902 aa20.5■□□□□ 0.87
CALM3-212ENST00000599839 NBPF10Q6P3W6 841 aaKnown RBP20.5■□□□□ 0.87
CALM3-212ENST00000599839 NBPF15Q8N660 670 aa20.5■□□□□ 0.87
CALM3-212ENST00000599839 ATF5Q9Y2D1 282 aaPredicted RBP20.5■□□□□ 0.87
CALM3-212ENST00000599839 IL16Q14005 1332 aa20.5■□□□□ 0.87
CALM3-212ENST00000599839 TRAPPC3LQ5T215 181 aa20.49■□□□□ 0.87
CALM3-212ENST00000599839 MSL1Q68DK7 614 aa20.49■□□□□ 0.87
CALM3-212ENST00000599839 WDR63Q8IWG1 891 aa20.49■□□□□ 0.87
CALM3-212ENST00000599839 FLAD1Q8NFF5 587 aa20.49■□□□□ 0.87
CALM3-212ENST00000599839 MTFR1LQ9H019 292 aa20.48■□□□□ 0.87
CALM3-212ENST00000599839 SRP68Q9UHB9 627 aaKnown RBP20.48■□□□□ 0.87
CALM3-212ENST00000599839 FANCIQ9NVI1 1328 aa20.48■□□□□ 0.87
CALM3-212ENST00000599839 ADRA2BP18089 450 aa20.47■□□□□ 0.87
CALM3-212ENST00000599839 PTGER2P43116 358 aa20.47■□□□□ 0.87
CALM3-212ENST00000599839 EIF5P55010 431 aaKnown RBP20.47■□□□□ 0.87
CALM3-212ENST00000599839 SGIP1Q9BQI5 828 aa20.47■□□□□ 0.87
CALM3-212ENST00000599839 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
CALM3-212ENST00000599839 C8orf58Q8NAV2 365 aa20.46■□□□□ 0.87
CALM3-212ENST00000599839 ZNF330Q9Y3S2 320 aaPredicted RBP20.46■□□□□ 0.87
CALM3-212ENST00000599839 USP42Q9H9J4 1324 aaKnown RBP20.46■□□□□ 0.87
CALM3-212ENST00000599839 EIF2S2P20042 333 aaKnown RBP20.46■□□□□ 0.87
CALM3-212ENST00000599839 IL6STP40189 918 aaPredicted RBP20.46■□□□□ 0.87
CALM3-212ENST00000599839 SLC16A10Q8TF71 515 aa20.46■□□□□ 0.87
CALM3-212ENST00000599839 NECTIN2Q92692 538 aa20.46■□□□□ 0.87
CALM3-212ENST00000599839 ELL2O00472 640 aaPredicted RBP20.45■□□□□ 0.86
CALM3-212ENST00000599839 RFC4P35249 363 aa20.45■□□□□ 0.86
CALM3-212ENST00000599839 DUSP27Q5VZP5 1158 aa20.45■□□□□ 0.86
CALM3-212ENST00000599839 TSPYL6Q8N831 410 aa20.45■□□□□ 0.86
CALM3-212ENST00000599839 SPON1Q9HCB6 807 aa20.45■□□□□ 0.86
CALM3-212ENST00000599839 ANXA1P04083 346 aa20.44■□□□□ 0.86
CALM3-212ENST00000599839 GYS1P13807 737 aa20.44■□□□□ 0.86
CALM3-212ENST00000599839 PDIA6Q15084 440 aa20.44■□□□□ 0.86
CALM3-212ENST00000599839 PROSER3Q2NL68 480 aa20.44■□□□□ 0.86
CALM3-212ENST00000599839 BCL2L12Q9HB09 334 aa20.43■□□□□ 0.86
CALM3-212ENST00000599839 NUP98P52948 1817 aa20.43■□□□□ 0.86
CALM3-212ENST00000599839 MYL6BP14649 208 aa20.42■□□□□ 0.86
CALM3-212ENST00000599839 USPL1Q5W0Q7 1092 aa20.42■□□□□ 0.86
CALM3-212ENST00000599839 LRP10Q7Z4F1 713 aa20.42■□□□□ 0.86
CALM3-212ENST00000599839 TBC1D2BQ9UPU7 963 aa20.42■□□□□ 0.86
CALM3-212ENST00000599839 AFDNP55196 1824 aaKnown RBP20.41■□□□□ 0.86
CALM3-212ENST00000599839 HOXB7P09629 217 aa20.41■□□□□ 0.86
CALM3-212ENST00000599839 FKBP8Q14318 412 aa20.41■□□□□ 0.86
CALM3-212ENST00000599839 CDCA7LQ96GN5 454 aa20.41■□□□□ 0.86
CALM3-212ENST00000599839 NARFQ9UHQ1 456 aa20.41■□□□□ 0.86
CALM3-212ENST00000599839 HNRNPUQ00839 825 aaKnown RBP eCLIP20.4■□□□□ 0.86
CALM3-212ENST00000599839 HDGFL1Q5TGJ6 251 aa20.4■□□□□ 0.86
CALM3-212ENST00000599839 CHPF2Q9P2E5 772 aa20.4■□□□□ 0.86
CALM3-212ENST00000599839 ERBB4Q15303 1308 aa20.4■□□□□ 0.86
CALM3-212ENST00000599839 EXOSC9Q06265 439 aaKnown RBP20.39■□□□□ 0.85
CALM3-212ENST00000599839 GOLGA2Q08379 1002 aa20.39■□□□□ 0.85
CALM3-212ENST00000599839 ANKRD36CQ5JPF3 1778 aa20.38■□□□□ 0.85
CALM3-212ENST00000599839 CAMTA2O94983 1202 aa20.38■□□□□ 0.85
CALM3-212ENST00000599839 TTLL7Q6ZT98 887 aa20.38■□□□□ 0.85
CALM3-212ENST00000599839 DZIP3Q86Y13 1208 aaKnown RBP20.38■□□□□ 0.85
CALM3-212ENST00000599839 NRXN2Q9P2S2 1712 aa20.38■□□□□ 0.85
CALM3-212ENST00000599839 ARFGEF2Q9Y6D5 1785 aa20.38■□□□□ 0.85
CALM3-212ENST00000599839 A0A087WZG4 1122 aa20.37■□□□□ 0.85
CALM3-212ENST00000599839 ZPR1O75312 459 aa20.37■□□□□ 0.85
CALM3-212ENST00000599839 TWISTNBQ3B726 338 aaPredicted RBP20.37■□□□□ 0.85
CALM3-212ENST00000599839 MYH16Q9H6N6 1097 aa20.37■□□□□ 0.85
CALM3-212ENST00000599839 SLFN5Q08AF3 891 aa20.36■□□□□ 0.85
CALM3-212ENST00000599839 ARXQ96QS3 562 aa20.36■□□□□ 0.85
CALM3-212ENST00000599839 KIF13BQ9NQT8 1826 aa20.36■□□□□ 0.85
CALM3-212ENST00000599839 TCERG1O14776 1098 aaKnown RBP20.35■□□□□ 0.85
CALM3-212ENST00000599839 MMP10P09238 476 aa20.35■□□□□ 0.85
CALM3-212ENST00000599839 DDR1Q08345 913 aa20.35■□□□□ 0.85
CALM3-212ENST00000599839 DDX21Q9NR30 783 aaKnown RBP eCLIP20.35■□□□□ 0.85
CALM3-212ENST00000599839 KIAA1551Q9HCM1 1747 aa20.35■□□□□ 0.85
CALM3-212ENST00000599839 CACNA1FO60840 1977 aa20.35■□□□□ 0.85
CALM3-212ENST00000599839 E9PSI1 815 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms