RNA–Protein interactions for RNA: ENST00000599479.1

TMEM38A-203, Transcript of transmembrane protein 38A, humanhuman

TSL 3

Gene TMEM38A, Length 410 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-203ENST00000599479 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.16
TMEM38A-203ENST00000599479 EIF4A1P60842 406 aaKnown RBP16.02■□□□□ 0.16
TMEM38A-203ENST00000599479 ARXQ96QS3 562 aa16.02■□□□□ 0.16
TMEM38A-203ENST00000599479 USP16Q9Y5T5 823 aa16.02■□□□□ 0.16
TMEM38A-203ENST00000599479 DLG5Q8TDM6 1919 aa16.02■□□□□ 0.15
TMEM38A-203ENST00000599479 CHL1O00533 1208 aa16.01■□□□□ 0.15
TMEM38A-203ENST00000599479 MSH5O43196 834 aa16.01■□□□□ 0.15
TMEM38A-203ENST00000599479 EIF5P55010 431 aaKnown RBP16.01■□□□□ 0.15
TMEM38A-203ENST00000599479 ZBTB1Q9Y2K1 713 aa16.01■□□□□ 0.15
TMEM38A-203ENST00000599479 GIGYF1O75420 1035 aaPredicted RBP16■□□□□ 0.15
TMEM38A-203ENST00000599479 POLD1P28340 1107 aa16■□□□□ 0.15
TMEM38A-203ENST00000599479 NEUROD2Q15784 382 aa16■□□□□ 0.15
TMEM38A-203ENST00000599479 PPP1R1BQ9UD71 204 aaPredicted RBP16■□□□□ 0.15
TMEM38A-203ENST00000599479 PRAMEF22A3QJZ6 481 aa15.99■□□□□ 0.15
TMEM38A-203ENST00000599479 GYS1P13807 737 aa15.99■□□□□ 0.15
TMEM38A-203ENST00000599479 RFC4P35249 363 aa15.99■□□□□ 0.15
TMEM38A-203ENST00000599479 NLGN1Q8N2Q7 840 aa15.99■□□□□ 0.15
TMEM38A-203ENST00000599479 USP42Q9H9J4 1324 aaKnown RBP15.98■□□□□ 0.15
TMEM38A-203ENST00000599479 A1BGP04217 495 aa15.98■□□□□ 0.15
TMEM38A-203ENST00000599479 IL6STP40189 918 aaPredicted RBP15.98■□□□□ 0.15
TMEM38A-203ENST00000599479 CCDC27Q2M243 656 aa15.98■□□□□ 0.15
TMEM38A-203ENST00000599479 SYT17Q9BSW7 474 aa15.98■□□□□ 0.15
TMEM38A-203ENST00000599479 ZNF853P0CG23 659 aa15.97■□□□□ 0.15
TMEM38A-203ENST00000599479 MSL1Q68DK7 614 aa15.97■□□□□ 0.15
TMEM38A-203ENST00000599479 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
TMEM38A-203ENST00000599479 FHDC1Q9C0D6 1143 aaPredicted RBP15.97■□□□□ 0.15
TMEM38A-203ENST00000599479 NARFQ9UHQ1 456 aa15.97■□□□□ 0.15
TMEM38A-203ENST00000599479 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.15
TMEM38A-203ENST00000599479 TSPYL4Q9UJ04 414 aa15.96■□□□□ 0.15
TMEM38A-203ENST00000599479 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
TMEM38A-203ENST00000599479 TM4SF1P30408 202 aa15.95■□□□□ 0.14
TMEM38A-203ENST00000599479 NBPF10Q6P3W6 841 aaKnown RBP15.95■□□□□ 0.14
TMEM38A-203ENST00000599479 NBPF15Q8N660 670 aa15.95■□□□□ 0.14
TMEM38A-203ENST00000599479 BCL2L12Q9HB09 334 aa15.95■□□□□ 0.14
TMEM38A-203ENST00000599479 SRP68Q9UHB9 627 aaKnown RBP15.95■□□□□ 0.14
TMEM38A-203ENST00000599479 A0A087WZG4 1122 aa15.94■□□□□ 0.14
TMEM38A-203ENST00000599479 FKBP8Q14318 412 aa15.94■□□□□ 0.14
TMEM38A-203ENST00000599479 COL15A1P39059 1388 aa15.94■□□□□ 0.14
TMEM38A-203ENST00000599479 KDM3BQ7LBC6 1761 aa15.94■□□□□ 0.14
TMEM38A-203ENST00000599479 CCER2I3L3R5 266 aa15.93■□□□□ 0.14
TMEM38A-203ENST00000599479 ZPR1O75312 459 aa15.93■□□□□ 0.14
TMEM38A-203ENST00000599479 MMP10P09238 476 aa15.93■□□□□ 0.14
TMEM38A-203ENST00000599479 USPL1Q5W0Q7 1092 aa15.93■□□□□ 0.14
TMEM38A-203ENST00000599479 WWC1Q8IX03 1113 aa15.93■□□□□ 0.14
TMEM38A-203ENST00000599479 IFT57Q9NWB7 429 aa15.93■□□□□ 0.14
TMEM38A-203ENST00000599479 CD2APQ9Y5K6 639 aa15.93■□□□□ 0.14
TMEM38A-203ENST00000599479 RGL2O15211 777 aa15.92■□□□□ 0.14
TMEM38A-203ENST00000599479 CALD1Q05682 793 aaKnown RBP15.92■□□□□ 0.14
TMEM38A-203ENST00000599479 NGEFQ8N5V2 710 aa15.91■□□□□ 0.14
TMEM38A-203ENST00000599479 ERBB4Q15303 1308 aa15.91■□□□□ 0.14
TMEM38A-203ENST00000599479 CAMTA2O94983 1202 aa15.9■□□□□ 0.14
TMEM38A-203ENST00000599479 GNAI1P63096 354 aa15.9■□□□□ 0.14
TMEM38A-203ENST00000599479 PDIA6Q15084 440 aa15.9■□□□□ 0.14
TMEM38A-203ENST00000599479 LRP10Q7Z4F1 713 aa15.9■□□□□ 0.14
TMEM38A-203ENST00000599479 MBIPQ9NS73 344 aa15.9■□□□□ 0.14
TMEM38A-203ENST00000599479 C4AP0C0L4 1744 aa15.89■□□□□ 0.13
TMEM38A-203ENST00000599479 HOXB7P09629 217 aa15.89■□□□□ 0.13
TMEM38A-203ENST00000599479 DDR1Q08345 913 aa15.89■□□□□ 0.13
TMEM38A-203ENST00000599479 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.13
TMEM38A-203ENST00000599479 TBC1D2BQ9UPU7 963 aa15.89■□□□□ 0.13
TMEM38A-203ENST00000599479 IL16Q14005 1332 aa15.89■□□□□ 0.13
TMEM38A-203ENST00000599479 POLRMTO00411 1230 aaKnown RBP15.88■□□□□ 0.13
TMEM38A-203ENST00000599479 PIP4K2AP48426 406 aaPredicted RBP15.88■□□□□ 0.13
TMEM38A-203ENST00000599479 NFIXQ14938 502 aa15.88■□□□□ 0.13
TMEM38A-203ENST00000599479 KRT24Q2M2I5 525 aa15.88■□□□□ 0.13
TMEM38A-203ENST00000599479 CLEC4GQ6UXB4 293 aa15.88■□□□□ 0.13
TMEM38A-203ENST00000599479 LAS1LQ9Y4W2 734 aaKnown RBP15.88■□□□□ 0.13
TMEM38A-203ENST00000599479 GOLGB1Q14789 3259 aaKnown RBP15.88■□□□□ 0.13
TMEM38A-203ENST00000599479 DZIP3Q86Y13 1208 aaKnown RBP15.87■□□□□ 0.13
TMEM38A-203ENST00000599479 WDR63Q8IWG1 891 aa15.87■□□□□ 0.13
TMEM38A-203ENST00000599479 NLGN2Q8NFZ4 835 aa15.87■□□□□ 0.13
TMEM38A-203ENST00000599479 PARP3Q9Y6F1 533 aa15.87■□□□□ 0.13
TMEM38A-203ENST00000599479 UTRNP46939 3433 aa15.87■□□□□ 0.13
TMEM38A-203ENST00000599479 DIEXFQ68CQ4 756 aaKnown RBP15.86■□□□□ 0.13
TMEM38A-203ENST00000599479 NPM2Q86SE8 214 aaKnown RBP15.86■□□□□ 0.13
TMEM38A-203ENST00000599479 ERVV-1B6SEH8 477 aa15.85■□□□□ 0.13
TMEM38A-203ENST00000599479 TGFB2P61812 414 aa15.85■□□□□ 0.13
TMEM38A-203ENST00000599479 TBC1D9BQ66K14 1250 aa15.85■□□□□ 0.13
TMEM38A-203ENST00000599479 EIF2S2P20042 333 aaKnown RBP15.84■□□□□ 0.13
TMEM38A-203ENST00000599479 DUSP27Q5VZP5 1158 aa15.84■□□□□ 0.13
TMEM38A-203ENST00000599479 DDX21Q9NR30 783 aaKnown RBP eCLIP15.84■□□□□ 0.13
TMEM38A-203ENST00000599479 ZNF330Q9Y3S2 320 aaPredicted RBP15.84■□□□□ 0.13
TMEM38A-203ENST00000599479 ZNF521Q96K83 1311 aa15.84■□□□□ 0.13
TMEM38A-203ENST00000599479 C10orf71Q711Q0 1435 aa15.84■□□□□ 0.13
TMEM38A-203ENST00000599479 PROSER3Q2NL68 480 aa15.83■□□□□ 0.12
TMEM38A-203ENST00000599479 C8orf58Q8NAV2 365 aa15.83■□□□□ 0.12
TMEM38A-203ENST00000599479 LAMB4A4D0S4 1761 aa15.82■□□□□ 0.12
TMEM38A-203ENST00000599479 SENP3-EIF4A1A0A087X0R7 540 aa15.82■□□□□ 0.12
TMEM38A-203ENST00000599479 SERPINB2P05120 415 aa15.82■□□□□ 0.12
TMEM38A-203ENST00000599479 HLFQ16534 295 aa15.82■□□□□ 0.12
TMEM38A-203ENST00000599479 TTLL7Q6ZT98 887 aa15.82■□□□□ 0.12
TMEM38A-203ENST00000599479 MYL6BP14649 208 aa15.81■□□□□ 0.12
TMEM38A-203ENST00000599479 KCNA3P22001 575 aa15.81■□□□□ 0.12
TMEM38A-203ENST00000599479 MAP3K15Q6ZN16 1313 aa15.81■□□□□ 0.12
TMEM38A-203ENST00000599479 MIER1Q8N108 512 aa15.81■□□□□ 0.12
TMEM38A-203ENST00000599479 KLHL34Q8N239 644 aa15.81■□□□□ 0.12
TMEM38A-203ENST00000599479 ZNF652Q9Y2D9 606 aa15.81■□□□□ 0.12
TMEM38A-203ENST00000599479 HDGFL1Q5TGJ6 251 aa15.8■□□□□ 0.12
TMEM38A-203ENST00000599479 TSR2Q969E8 191 aaKnown RBP15.8■□□□□ 0.12
TMEM38A-203ENST00000599479 SETDB2Q96T68 719 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms