RNA–Protein interactions for RNA: ENST00000599329.1

GTPBP3-219, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 3

Gene GTPBP3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-219ENST00000599329 TRIM35Q9UPQ4 493 aa20.57■□□□□ 0.88
GTPBP3-219ENST00000599329 SOS1Q07889 1333 aaPredicted RBP20.56■□□□□ 0.88
GTPBP3-219ENST00000599329 APAF1O14727 1248 aa20.56■□□□□ 0.88
GTPBP3-219ENST00000599329 POLD1P28340 1107 aa20.56■□□□□ 0.88
GTPBP3-219ENST00000599329 ARXQ96QS3 562 aa20.56■□□□□ 0.88
GTPBP3-219ENST00000599329 ZBTB1Q9Y2K1 713 aa20.56■□□□□ 0.88
GTPBP3-219ENST00000599329 SNRPA1P09661 255 aaKnown RBP20.54■□□□□ 0.88
GTPBP3-219ENST00000599329 KDM3BQ7LBC6 1761 aa20.54■□□□□ 0.88
GTPBP3-219ENST00000599329 RFC4P35249 363 aa20.53■□□□□ 0.88
GTPBP3-219ENST00000599329 PRAMEF22A3QJZ6 481 aa20.52■□□□□ 0.88
GTPBP3-219ENST00000599329 BABAM1Q9NWV8 329 aa20.52■□□□□ 0.88
GTPBP3-219ENST00000599329 C4AP0C0L4 1744 aa20.52■□□□□ 0.88
GTPBP3-219ENST00000599329 CANXP27824 592 aaKnown RBP20.51■□□□□ 0.87
GTPBP3-219ENST00000599329 EIF4A1P60842 406 aaKnown RBP20.51■□□□□ 0.87
GTPBP3-219ENST00000599329 FHDC1Q9C0D6 1143 aaPredicted RBP20.51■□□□□ 0.87
GTPBP3-219ENST00000599329 TSPYL4Q9UJ04 414 aa20.51■□□□□ 0.87
GTPBP3-219ENST00000599329 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
GTPBP3-219ENST00000599329 USP42Q9H9J4 1324 aaKnown RBP20.51■□□□□ 0.87
GTPBP3-219ENST00000599329 COL15A1P39059 1388 aa20.5■□□□□ 0.87
GTPBP3-219ENST00000599329 A1BGP04217 495 aa20.5■□□□□ 0.87
GTPBP3-219ENST00000599329 GYS1P13807 737 aa20.5■□□□□ 0.87
GTPBP3-219ENST00000599329 EIF5P55010 431 aaKnown RBP20.5■□□□□ 0.87
GTPBP3-219ENST00000599329 SRP68Q9UHB9 627 aaKnown RBP20.5■□□□□ 0.87
GTPBP3-219ENST00000599329 NLGN1Q8N2Q7 840 aa20.49■□□□□ 0.87
GTPBP3-219ENST00000599329 CHL1O00533 1208 aa20.48■□□□□ 0.87
GTPBP3-219ENST00000599329 GIGYF1O75420 1035 aaPredicted RBP20.48■□□□□ 0.87
GTPBP3-219ENST00000599329 SYT17Q9BSW7 474 aa20.48■□□□□ 0.87
GTPBP3-219ENST00000599329 IL6STP40189 918 aaPredicted RBP20.47■□□□□ 0.87
GTPBP3-219ENST00000599329 MMP10P09238 476 aa20.46■□□□□ 0.87
GTPBP3-219ENST00000599329 FKBP8Q14318 412 aa20.46■□□□□ 0.87
GTPBP3-219ENST00000599329 NARFQ9UHQ1 456 aa20.46■□□□□ 0.87
GTPBP3-219ENST00000599329 ZPR1O75312 459 aa20.45■□□□□ 0.86
GTPBP3-219ENST00000599329 A0A087WZG4 1122 aa20.44■□□□□ 0.86
GTPBP3-219ENST00000599329 NBPF26B4DH59 902 aa20.44■□□□□ 0.86
GTPBP3-219ENST00000599329 PIP4K2AP48426 406 aaPredicted RBP20.44■□□□□ 0.86
GTPBP3-219ENST00000599329 USPL1Q5W0Q7 1092 aa20.44■□□□□ 0.86
GTPBP3-219ENST00000599329 NBPF10Q6P3W6 841 aaKnown RBP20.44■□□□□ 0.86
GTPBP3-219ENST00000599329 NBPF15Q8N660 670 aa20.44■□□□□ 0.86
GTPBP3-219ENST00000599329 CFAP44Q96MT7 982 aa20.43■□□□□ 0.86
GTPBP3-219ENST00000599329 BCL2L12Q9HB09 334 aa20.43■□□□□ 0.86
GTPBP3-219ENST00000599329 LAS1LQ9Y4W2 734 aaKnown RBP20.43■□□□□ 0.86
GTPBP3-219ENST00000599329 LAMB4A4D0S4 1761 aa20.43■□□□□ 0.86
GTPBP3-219ENST00000599329 ZNF853P0CG23 659 aa20.42■□□□□ 0.86
GTPBP3-219ENST00000599329 CALD1Q05682 793 aaKnown RBP20.42■□□□□ 0.86
GTPBP3-219ENST00000599329 CCDC27Q2M243 656 aa20.42■□□□□ 0.86
GTPBP3-219ENST00000599329 NCBP3Q53F19 620 aaKnown RBP20.42■□□□□ 0.86
GTPBP3-219ENST00000599329 FAM9BQ8IZU0 186 aa20.42■□□□□ 0.86
GTPBP3-219ENST00000599329 KLHL34Q8N239 644 aa20.42■□□□□ 0.86
GTPBP3-219ENST00000599329 ZNF330Q9Y3S2 320 aaPredicted RBP20.42■□□□□ 0.86
GTPBP3-219ENST00000599329 SENP3-EIF4A1A0A087X0R7 540 aa20.41■□□□□ 0.86
GTPBP3-219ENST00000599329 IFT57Q9NWB7 429 aa20.41■□□□□ 0.86
GTPBP3-219ENST00000599329 CD2APQ9Y5K6 639 aa20.41■□□□□ 0.86
GTPBP3-219ENST00000599329 DDR1Q08345 913 aa20.4■□□□□ 0.86
GTPBP3-219ENST00000599329 NLGN2Q8NFZ4 835 aa20.4■□□□□ 0.86
GTPBP3-219ENST00000599329 TBC1D2BQ9UPU7 963 aa20.4■□□□□ 0.86
GTPBP3-219ENST00000599329 TM4SF1P30408 202 aa20.39■□□□□ 0.85
GTPBP3-219ENST00000599329 KRT24Q2M2I5 525 aa20.39■□□□□ 0.85
GTPBP3-219ENST00000599329 NPM2Q86SE8 214 aaKnown RBP20.39■□□□□ 0.85
GTPBP3-219ENST00000599329 WWC1Q8IX03 1113 aa20.39■□□□□ 0.85
GTPBP3-219ENST00000599329 MBIPQ9NS73 344 aa20.39■□□□□ 0.85
GTPBP3-219ENST00000599329 CAMTA2O94983 1202 aa20.38■□□□□ 0.85
GTPBP3-219ENST00000599329 GNAI1P63096 354 aa20.38■□□□□ 0.85
GTPBP3-219ENST00000599329 DZIP3Q86Y13 1208 aaKnown RBP20.38■□□□□ 0.85
GTPBP3-219ENST00000599329 PARP3Q9Y6F1 533 aa20.38■□□□□ 0.85
GTPBP3-219ENST00000599329 SCN7AQ01118 1682 aa20.38■□□□□ 0.85
GTPBP3-219ENST00000599329 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
GTPBP3-219ENST00000599329 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
GTPBP3-219ENST00000599329 NFIXQ14938 502 aa20.37■□□□□ 0.85
GTPBP3-219ENST00000599329 C10orf71Q711Q0 1435 aa20.36■□□□□ 0.85
GTPBP3-219ENST00000599329 POLRMTO00411 1230 aaKnown RBP20.36■□□□□ 0.85
GTPBP3-219ENST00000599329 DIEXFQ68CQ4 756 aaKnown RBP20.35■□□□□ 0.85
GTPBP3-219ENST00000599329 HOXB7P09629 217 aa20.34■□□□□ 0.85
GTPBP3-219ENST00000599329 EIF2S2P20042 333 aaKnown RBP20.34■□□□□ 0.85
GTPBP3-219ENST00000599329 PDIA6Q15084 440 aa20.34■□□□□ 0.85
GTPBP3-219ENST00000599329 IL16Q14005 1332 aa20.33■□□□□ 0.85
GTPBP3-219ENST00000599329 RGL2O15211 777 aa20.33■□□□□ 0.85
GTPBP3-219ENST00000599329 TBC1D9BQ66K14 1250 aa20.33■□□□□ 0.85
GTPBP3-219ENST00000599329 LRP10Q7Z4F1 713 aa20.33■□□□□ 0.85
GTPBP3-219ENST00000599329 BCORQ6W2J9 1755 aa20.33■□□□□ 0.84
GTPBP3-219ENST00000599329 MYL6BP14649 208 aa20.32■□□□□ 0.84
GTPBP3-219ENST00000599329 PROSER3Q2NL68 480 aa20.32■□□□□ 0.84
GTPBP3-219ENST00000599329 DUSP27Q5VZP5 1158 aa20.32■□□□□ 0.84
GTPBP3-219ENST00000599329 NGEFQ8N5V2 710 aa20.32■□□□□ 0.84
GTPBP3-219ENST00000599329 SALL2Q9Y467 1007 aaPredicted RBP20.32■□□□□ 0.84
GTPBP3-219ENST00000599329 CLEC4GQ6UXB4 293 aa20.31■□□□□ 0.84
GTPBP3-219ENST00000599329 BICDL1Q6ZP65 573 aa20.31■□□□□ 0.84
GTPBP3-219ENST00000599329 KIF13BQ9NQT8 1826 aa20.31■□□□□ 0.84
GTPBP3-219ENST00000599329 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
GTPBP3-219ENST00000599329 TTLL7Q6ZT98 887 aa20.3■□□□□ 0.84
GTPBP3-219ENST00000599329 WDR63Q8IWG1 891 aa20.3■□□□□ 0.84
GTPBP3-219ENST00000599329 NECTIN2Q92692 538 aa20.3■□□□□ 0.84
GTPBP3-219ENST00000599329 ZNF652Q9Y2D9 606 aa20.3■□□□□ 0.84
GTPBP3-219ENST00000599329 PXDNLA1KZ92 1463 aa20.3■□□□□ 0.84
GTPBP3-219ENST00000599329 ANXA1P04083 346 aa20.29■□□□□ 0.84
GTPBP3-219ENST00000599329 SERPINB2P05120 415 aa20.29■□□□□ 0.84
GTPBP3-219ENST00000599329 HDGFL1Q5TGJ6 251 aa20.29■□□□□ 0.84
GTPBP3-219ENST00000599329 TSR2Q969E8 191 aaKnown RBP20.29■□□□□ 0.84
GTPBP3-219ENST00000599329 DDX21Q9NR30 783 aaKnown RBP eCLIP20.29■□□□□ 0.84
GTPBP3-219ENST00000599329 NRXN2Q9P2S2 1712 aa20.29■□□□□ 0.84
GTPBP3-219ENST00000599329 CARMIL3Q8ND23 1372 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms