RNA–Protein interactions for RNA: ENST00000599107.1

KCNN4-204, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 2

Gene KCNN4, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-204ENST00000599107 LINC00116Q8NCU8 138 aa25.6■■□□□ 1.69
KCNN4-204ENST00000599107 KCNQ3O43525 872 aa25.58■■□□□ 1.69
KCNN4-204ENST00000599107 MYH14Q7Z406 1995 aaKnown RBP25.57■■□□□ 1.68
KCNN4-204ENST00000599107 SNRPA1P09661 255 aaKnown RBP25.57■■□□□ 1.68
KCNN4-204ENST00000599107 EIF4A1P60842 406 aaKnown RBP25.57■■□□□ 1.68
KCNN4-204ENST00000599107 SLC16A10Q8TF71 515 aa25.57■■□□□ 1.68
KCNN4-204ENST00000599107 AK7Q96M32 723 aa25.57■■□□□ 1.68
KCNN4-204ENST00000599107 ZNF521Q96K83 1311 aa25.57■■□□□ 1.68
KCNN4-204ENST00000599107 STARD3NLO95772 234 aa25.56■■□□□ 1.68
KCNN4-204ENST00000599107 DNAJC10Q8IXB1 793 aa25.56■■□□□ 1.68
KCNN4-204ENST00000599107 MIS18AQ9NYP9 233 aa25.56■■□□□ 1.68
KCNN4-204ENST00000599107 CYP19A1P11511 503 aaPredicted RBP25.55■■□□□ 1.68
KCNN4-204ENST00000599107 FLAD1Q8NFF5 587 aa25.55■■□□□ 1.68
KCNN4-204ENST00000599107 CHD4Q14839 1912 aa25.55■■□□□ 1.68
KCNN4-204ENST00000599107 TFCP2L1Q9NZI6 479 aa25.54■■□□□ 1.68
KCNN4-204ENST00000599107 SSFA2P28290 1259 aa25.53■■□□□ 1.68
KCNN4-204ENST00000599107 CRKLP46109 303 aaKnown RBP25.53■■□□□ 1.68
KCNN4-204ENST00000599107 MBIPQ9NS73 344 aa25.53■■□□□ 1.68
KCNN4-204ENST00000599107 GIGYF1O75420 1035 aaPredicted RBP25.52■■□□□ 1.68
KCNN4-204ENST00000599107 HOXB7P09629 217 aa25.52■■□□□ 1.68
KCNN4-204ENST00000599107 ADRA2BP18089 450 aa25.52■■□□□ 1.68
KCNN4-204ENST00000599107 CCDC87Q9NVE4 849 aa25.52■■□□□ 1.68
KCNN4-204ENST00000599107 LAS1LQ9Y4W2 734 aaKnown RBP25.52■■□□□ 1.68
KCNN4-204ENST00000599107 ZNF784Q8NCA9 323 aaPredicted RBP25.51■■□□□ 1.67
KCNN4-204ENST00000599107 SOS1Q07889 1333 aaPredicted RBP25.51■■□□□ 1.67
KCNN4-204ENST00000599107 GNPATO15228 680 aa25.5■■□□□ 1.67
KCNN4-204ENST00000599107 RPS6KA4O75676 772 aa25.5■■□□□ 1.67
KCNN4-204ENST00000599107 RTCBQ9Y3I0 505 aaKnown RBP25.5■■□□□ 1.67
KCNN4-204ENST00000599107 C4AP0C0L4 1744 aa25.49■■□□□ 1.67
KCNN4-204ENST00000599107 INTS5Q6P9B9 1019 aaKnown RBP25.49■■□□□ 1.67
KCNN4-204ENST00000599107 ERBB4Q15303 1308 aa25.48■■□□□ 1.67
KCNN4-204ENST00000599107 SALL2Q9Y467 1007 aaPredicted RBP25.48■■□□□ 1.67
KCNN4-204ENST00000599107 POLD1P28340 1107 aa25.47■■□□□ 1.67
KCNN4-204ENST00000599107 SENP3-EIF4A1A0A087X0R7 540 aa25.46■■□□□ 1.67
KCNN4-204ENST00000599107 MYH16Q9H6N6 1097 aa25.46■■□□□ 1.67
KCNN4-204ENST00000599107 USP16Q9Y5T5 823 aa25.46■■□□□ 1.67
KCNN4-204ENST00000599107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.45■■□□□ 1.66
KCNN4-204ENST00000599107 COL23A1Q86Y22 540 aaPredicted RBP25.45■■□□□ 1.66
KCNN4-204ENST00000599107 CHMP4AQ9BY43 222 aa25.45■■□□□ 1.66
KCNN4-204ENST00000599107 ZBTB1Q9Y2K1 713 aa25.45■■□□□ 1.66
KCNN4-204ENST00000599107 FANCIQ9NVI1 1328 aa25.44■■□□□ 1.66
KCNN4-204ENST00000599107 IL6STP40189 918 aaPredicted RBP25.44■■□□□ 1.66
KCNN4-204ENST00000599107 GOLGA2Q08379 1002 aa25.44■■□□□ 1.66
KCNN4-204ENST00000599107 COL15A1P39059 1388 aa25.44■■□□□ 1.66
KCNN4-204ENST00000599107 GOLGB1Q14789 3259 aaKnown RBP25.43■■□□□ 1.66
KCNN4-204ENST00000599107 PRAMEF22A3QJZ6 481 aa25.43■■□□□ 1.66
KCNN4-204ENST00000599107 E9PSI1 815 aa25.42■■□□□ 1.66
KCNN4-204ENST00000599107 TRAPPC3LQ5T215 181 aa25.42■■□□□ 1.66
KCNN4-204ENST00000599107 AMIGO3Q86WK7 504 aa25.42■■□□□ 1.66
KCNN4-204ENST00000599107 KLHL34Q8N239 644 aa25.42■■□□□ 1.66
KCNN4-204ENST00000599107 NLGN2Q8NFZ4 835 aa25.42■■□□□ 1.66
KCNN4-204ENST00000599107 EIF5P55010 431 aaKnown RBP25.41■■□□□ 1.66
KCNN4-204ENST00000599107 SCN7AQ01118 1682 aa25.41■■□□□ 1.66
KCNN4-204ENST00000599107 A0A087WZG4 1122 aa25.4■■□□□ 1.66
KCNN4-204ENST00000599107 PHF14O94880 888 aa25.4■■□□□ 1.66
KCNN4-204ENST00000599107 GPR162Q16538 588 aa25.4■■□□□ 1.66
KCNN4-204ENST00000599107 DUSP27Q5VZP5 1158 aa25.4■■□□□ 1.66
KCNN4-204ENST00000599107 TSR2Q969E8 191 aaKnown RBP25.4■■□□□ 1.66
KCNN4-204ENST00000599107 A1BGP04217 495 aa25.39■■□□□ 1.66
KCNN4-204ENST00000599107 HNRNPUQ00839 825 aaKnown RBP eCLIP25.39■■□□□ 1.66
KCNN4-204ENST00000599107 BCORQ6W2J9 1755 aa25.39■■□□□ 1.65
KCNN4-204ENST00000599107 CANXP27824 592 aaKnown RBP25.38■■□□□ 1.65
KCNN4-204ENST00000599107 KRT24Q2M2I5 525 aa25.38■■□□□ 1.65
KCNN4-204ENST00000599107 ZBED9Q6R2W3 1325 aa25.37■■□□□ 1.65
KCNN4-204ENST00000599107 RFC4P35249 363 aa25.37■■□□□ 1.65
KCNN4-204ENST00000599107 NPM2Q86SE8 214 aaKnown RBP25.37■■□□□ 1.65
KCNN4-204ENST00000599107 ARHGEF1Q92888 912 aaKnown RBP25.37■■□□□ 1.65
KCNN4-204ENST00000599107 SPINK5Q9NQ38 1064 aaPredicted RBP25.37■■□□□ 1.65
KCNN4-204ENST00000599107 USP42Q9H9J4 1324 aaKnown RBP25.37■■□□□ 1.65
KCNN4-204ENST00000599107 RGL2O15211 777 aa25.36■■□□□ 1.65
KCNN4-204ENST00000599107 HDGFL1Q5TGJ6 251 aa25.36■■□□□ 1.65
KCNN4-204ENST00000599107 NBPF26B4DH59 902 aa25.35■■□□□ 1.65
KCNN4-204ENST00000599107 MSH5O43196 834 aa25.35■■□□□ 1.65
KCNN4-204ENST00000599107 SLFN5Q08AF3 891 aa25.35■■□□□ 1.65
KCNN4-204ENST00000599107 MSL1Q68DK7 614 aa25.35■■□□□ 1.65
KCNN4-204ENST00000599107 NBPF10Q6P3W6 841 aaKnown RBP25.35■■□□□ 1.65
KCNN4-204ENST00000599107 NBPF15Q8N660 670 aa25.35■■□□□ 1.65
KCNN4-204ENST00000599107 C8orf58Q8NAV2 365 aa25.35■■□□□ 1.65
KCNN4-204ENST00000599107 TWISTNBQ3B726 338 aaPredicted RBP25.34■■□□□ 1.65
KCNN4-204ENST00000599107 NARFQ9UHQ1 456 aa25.34■■□□□ 1.65
KCNN4-204ENST00000599107 CACNA1FO60840 1977 aa25.34■■□□□ 1.65
KCNN4-204ENST00000599107 TRMT2AQ8IZ69 625 aaKnown RBP25.33■■□□□ 1.65
KCNN4-204ENST00000599107 DDX21Q9NR30 783 aaKnown RBP eCLIP25.33■■□□□ 1.65
KCNN4-204ENST00000599107 DBF4Q9UBU7 674 aaPredicted RBP25.33■■□□□ 1.65
KCNN4-204ENST00000599107 EIF2S2P20042 333 aaKnown RBP25.32■■□□□ 1.64
KCNN4-204ENST00000599107 PELP1Q8IZL8 1130 aaKnown RBP25.32■■□□□ 1.64
KCNN4-204ENST00000599107 ZPR1O75312 459 aa25.31■■□□□ 1.64
KCNN4-204ENST00000599107 YBX3P16989 372 aaKnown RBP eCLIP25.31■■□□□ 1.64
KCNN4-204ENST00000599107 PDIA6Q15084 440 aa25.31■■□□□ 1.64
KCNN4-204ENST00000599107 CCDC30Q5VVM6 783 aa25.31■■□□□ 1.64
KCNN4-204ENST00000599107 EXOSC9Q06265 439 aaKnown RBP25.3■■□□□ 1.64
KCNN4-204ENST00000599107 SMIM5Q71RC9 77 aa25.3■■□□□ 1.64
KCNN4-204ENST00000599107 LRP10Q7Z4F1 713 aa25.3■■□□□ 1.64
KCNN4-204ENST00000599107 NLGN1Q8N2Q7 840 aa25.3■■□□□ 1.64
KCNN4-204ENST00000599107 TSPYL6Q8N831 410 aa25.3■■□□□ 1.64
KCNN4-204ENST00000599107 GYS1P13807 737 aa25.29■■□□□ 1.64
KCNN4-204ENST00000599107 DZIP3Q86Y13 1208 aaKnown RBP25.28■■□□□ 1.64
KCNN4-204ENST00000599107 HYPKQ9NX55 129 aa25.28■■□□□ 1.64
KCNN4-204ENST00000599107 CHPF2Q9P2E5 772 aa25.28■■□□□ 1.64
KCNN4-204ENST00000599107 ZNF330Q9Y3S2 320 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms