RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 SNRPA1P09661 255 aaKnown RBP19.62■□□□□ 0.73
IRF3-211ENST00000596644 PTGER2P43116 358 aa19.62■□□□□ 0.73
IRF3-211ENST00000596644 DIEXFQ68CQ4 756 aaKnown RBP19.62■□□□□ 0.73
IRF3-211ENST00000596644 MSL1Q68DK7 614 aa19.62■□□□□ 0.73
IRF3-211ENST00000596644 C4AP0C0L4 1744 aa19.62■□□□□ 0.73
IRF3-211ENST00000596644 COL24A1Q17RW2 1714 aa19.62■□□□□ 0.73
IRF3-211ENST00000596644 RFC4P35249 363 aa19.61■□□□□ 0.73
IRF3-211ENST00000596644 ZBTB1Q9Y2K1 713 aa19.61■□□□□ 0.73
IRF3-211ENST00000596644 LAS1LQ9Y4W2 734 aaKnown RBP19.61■□□□□ 0.73
IRF3-211ENST00000596644 LAMB4A4D0S4 1761 aa19.6■□□□□ 0.73
IRF3-211ENST00000596644 CANXP27824 592 aaKnown RBP19.6■□□□□ 0.73
IRF3-211ENST00000596644 ARHGEF1Q92888 912 aaKnown RBP19.6■□□□□ 0.73
IRF3-211ENST00000596644 SGIP1Q9BQI5 828 aa19.6■□□□□ 0.73
IRF3-211ENST00000596644 BABAM1Q9NWV8 329 aa19.6■□□□□ 0.73
IRF3-211ENST00000596644 SOS1Q07889 1333 aaPredicted RBP19.59■□□□□ 0.73
IRF3-211ENST00000596644 SENP3-EIF4A1A0A087X0R7 540 aa19.59■□□□□ 0.73
IRF3-211ENST00000596644 EIF4A1P60842 406 aaKnown RBP19.59■□□□□ 0.73
IRF3-211ENST00000596644 PRAMEF22A3QJZ6 481 aa19.58■□□□□ 0.72
IRF3-211ENST00000596644 CALD1Q05682 793 aaKnown RBP19.58■□□□□ 0.72
IRF3-211ENST00000596644 ARXQ96QS3 562 aa19.58■□□□□ 0.72
IRF3-211ENST00000596644 USP16Q9Y5T5 823 aa19.58■□□□□ 0.72
IRF3-211ENST00000596644 COL15A1P39059 1388 aa19.57■□□□□ 0.72
IRF3-211ENST00000596644 ZNF330Q9Y3S2 320 aaPredicted RBP19.57■□□□□ 0.72
IRF3-211ENST00000596644 CCER2I3L3R5 266 aa19.56■□□□□ 0.72
IRF3-211ENST00000596644 A1BGP04217 495 aa19.56■□□□□ 0.72
IRF3-211ENST00000596644 NPM2Q86SE8 214 aaKnown RBP19.56■□□□□ 0.72
IRF3-211ENST00000596644 CHL1O00533 1208 aa19.55■□□□□ 0.72
IRF3-211ENST00000596644 ZPR1O75312 459 aa19.55■□□□□ 0.72
IRF3-211ENST00000596644 GIGYF1O75420 1035 aaPredicted RBP19.55■□□□□ 0.72
IRF3-211ENST00000596644 CFAP44Q96MT7 982 aa19.55■□□□□ 0.72
IRF3-211ENST00000596644 USP42Q9H9J4 1324 aaKnown RBP19.54■□□□□ 0.72
IRF3-211ENST00000596644 SRCAPQ6ZRS2 3230 aa19.54■□□□□ 0.72
IRF3-211ENST00000596644 A0A087WZG4 1122 aa19.54■□□□□ 0.72
IRF3-211ENST00000596644 IL6STP40189 918 aaPredicted RBP19.54■□□□□ 0.72
IRF3-211ENST00000596644 SRP68Q9UHB9 627 aaKnown RBP19.54■□□□□ 0.72
IRF3-211ENST00000596644 GYS1P13807 737 aa19.53■□□□□ 0.72
IRF3-211ENST00000596644 EIF5P55010 431 aaKnown RBP19.53■□□□□ 0.72
IRF3-211ENST00000596644 GNAI1P63096 354 aa19.53■□□□□ 0.72
IRF3-211ENST00000596644 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
IRF3-211ENST00000596644 KLHL34Q8N239 644 aa19.53■□□□□ 0.72
IRF3-211ENST00000596644 NLGN1Q8N2Q7 840 aa19.53■□□□□ 0.72
IRF3-211ENST00000596644 IFT57Q9NWB7 429 aa19.53■□□□□ 0.72
IRF3-211ENST00000596644 PIP4K2AP48426 406 aaPredicted RBP19.52■□□□□ 0.72
IRF3-211ENST00000596644 NARFQ9UHQ1 456 aa19.52■□□□□ 0.72
IRF3-211ENST00000596644 SALL2Q9Y467 1007 aaPredicted RBP19.52■□□□□ 0.72
IRF3-211ENST00000596644 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
IRF3-211ENST00000596644 USPL1Q5W0Q7 1092 aa19.51■□□□□ 0.71
IRF3-211ENST00000596644 WWC1Q8IX03 1113 aa19.51■□□□□ 0.71
IRF3-211ENST00000596644 FHDC1Q9C0D6 1143 aaPredicted RBP19.51■□□□□ 0.71
IRF3-211ENST00000596644 MBIPQ9NS73 344 aa19.51■□□□□ 0.71
IRF3-211ENST00000596644 MMP10P09238 476 aa19.5■□□□□ 0.71
IRF3-211ENST00000596644 ZNF853P0CG23 659 aa19.49■□□□□ 0.71
IRF3-211ENST00000596644 FKBP8Q14318 412 aa19.49■□□□□ 0.71
IRF3-211ENST00000596644 SCN7AQ01118 1682 aa19.49■□□□□ 0.71
IRF3-211ENST00000596644 NBPF26B4DH59 902 aa19.48■□□□□ 0.71
IRF3-211ENST00000596644 EIF2S2P20042 333 aaKnown RBP19.48■□□□□ 0.71
IRF3-211ENST00000596644 NBPF10Q6P3W6 841 aaKnown RBP19.48■□□□□ 0.71
IRF3-211ENST00000596644 MIER1Q8N108 512 aa19.48■□□□□ 0.71
IRF3-211ENST00000596644 NBPF15Q8N660 670 aa19.48■□□□□ 0.71
IRF3-211ENST00000596644 TBC1D2BQ9UPU7 963 aa19.48■□□□□ 0.71
IRF3-211ENST00000596644 KRT24Q2M2I5 525 aa19.47■□□□□ 0.71
IRF3-211ENST00000596644 DZIP3Q86Y13 1208 aaKnown RBP19.47■□□□□ 0.71
IRF3-211ENST00000596644 SYT17Q9BSW7 474 aa19.47■□□□□ 0.71
IRF3-211ENST00000596644 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
IRF3-211ENST00000596644 NGEFQ8N5V2 710 aa19.46■□□□□ 0.71
IRF3-211ENST00000596644 BCORQ6W2J9 1755 aa19.46■□□□□ 0.71
IRF3-211ENST00000596644 ERBB4Q15303 1308 aa19.46■□□□□ 0.71
IRF3-211ENST00000596644 MYL6BP14649 208 aa19.45■□□□□ 0.7
IRF3-211ENST00000596644 NECTIN2Q92692 538 aa19.45■□□□□ 0.7
IRF3-211ENST00000596644 IL16Q14005 1332 aa19.45■□□□□ 0.7
IRF3-211ENST00000596644 HOXB7P09629 217 aa19.44■□□□□ 0.7
IRF3-211ENST00000596644 DUSP27Q5VZP5 1158 aa19.44■□□□□ 0.7
IRF3-211ENST00000596644 WDR63Q8IWG1 891 aa19.44■□□□□ 0.7
IRF3-211ENST00000596644 BCL2L12Q9HB09 334 aa19.44■□□□□ 0.7
IRF3-211ENST00000596644 CAMTA2O94983 1202 aa19.43■□□□□ 0.7
IRF3-211ENST00000596644 HDGFL1Q5TGJ6 251 aa19.43■□□□□ 0.7
IRF3-211ENST00000596644 TSR2Q969E8 191 aaKnown RBP19.43■□□□□ 0.7
IRF3-211ENST00000596644 DDR1Q08345 913 aa19.42■□□□□ 0.7
IRF3-211ENST00000596644 NFIXQ14938 502 aa19.42■□□□□ 0.7
IRF3-211ENST00000596644 BICDL1Q6ZP65 573 aa19.42■□□□□ 0.7
IRF3-211ENST00000596644 ZNF652Q9Y2D9 606 aa19.42■□□□□ 0.7
IRF3-211ENST00000596644 CD2APQ9Y5K6 639 aa19.42■□□□□ 0.7
IRF3-211ENST00000596644 TM4SF1P30408 202 aa19.41■□□□□ 0.7
IRF3-211ENST00000596644 KIF6Q6ZMV9 814 aa19.41■□□□□ 0.7
IRF3-211ENST00000596644 DCAF8L1A6NGE4 600 aa19.4■□□□□ 0.7
IRF3-211ENST00000596644 POLRMTO00411 1230 aaKnown RBP19.4■□□□□ 0.7
IRF3-211ENST00000596644 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
IRF3-211ENST00000596644 TBC1D9BQ66K14 1250 aa19.4■□□□□ 0.7
IRF3-211ENST00000596644 NLGN2Q8NFZ4 835 aa19.4■□□□□ 0.7
IRF3-211ENST00000596644 ANXA1P04083 346 aa19.39■□□□□ 0.69
IRF3-211ENST00000596644 PDIA6Q15084 440 aa19.39■□□□□ 0.69
IRF3-211ENST00000596644 PROSER3Q2NL68 480 aa19.39■□□□□ 0.69
IRF3-211ENST00000596644 C8orf58Q8NAV2 365 aa19.39■□□□□ 0.69
IRF3-211ENST00000596644 C10orf71Q711Q0 1435 aa19.39■□□□□ 0.69
IRF3-211ENST00000596644 AFDNP55196 1824 aaKnown RBP19.39■□□□□ 0.69
IRF3-211ENST00000596644 KIF13BQ9NQT8 1826 aa19.39■□□□□ 0.69
IRF3-211ENST00000596644 CLEC4GQ6UXB4 293 aa19.38■□□□□ 0.69
IRF3-211ENST00000596644 DDX21Q9NR30 783 aaKnown RBP eCLIP19.38■□□□□ 0.69
IRF3-211ENST00000596644 FANCIQ9NVI1 1328 aa19.38■□□□□ 0.69
IRF3-211ENST00000596644 CHPF2Q9P2E5 772 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms