RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 WDR63Q8IWG1 891 aa26.09■■□□□ 1.77
CCDC61-205ENST00000596161 CASZ1Q86V15 1759 aa26.09■■□□□ 1.77
CCDC61-205ENST00000596161 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.07■■□□□ 1.76
CCDC61-205ENST00000596161 MSH5O43196 834 aa26.07■■□□□ 1.76
CCDC61-205ENST00000596161 GIGYF1O75420 1035 aaPredicted RBP26.07■■□□□ 1.76
CCDC61-205ENST00000596161 PHF14O94880 888 aa26.07■■□□□ 1.76
CCDC61-205ENST00000596161 ADRA2BP18089 450 aa26.07■■□□□ 1.76
CCDC61-205ENST00000596161 INTS5Q6P9B9 1019 aaKnown RBP26.07■■□□□ 1.76
CCDC61-205ENST00000596161 SLC16A10Q8TF71 515 aa26.07■■□□□ 1.76
CCDC61-205ENST00000596161 COL23A1Q86Y22 540 aaPredicted RBP26.06■■□□□ 1.76
CCDC61-205ENST00000596161 MBIPQ9NS73 344 aa26.06■■□□□ 1.76
CCDC61-205ENST00000596161 USP16Q9Y5T5 823 aa26.06■■□□□ 1.76
CCDC61-205ENST00000596161 MYH14Q7Z406 1995 aaKnown RBP26.05■■□□□ 1.76
CCDC61-205ENST00000596161 LAMB4A4D0S4 1761 aa26.05■■□□□ 1.76
CCDC61-205ENST00000596161 PRAMEF22A3QJZ6 481 aa26.04■■□□□ 1.76
CCDC61-205ENST00000596161 TRAPPC3LQ5T215 181 aa26.04■■□□□ 1.76
CCDC61-205ENST00000596161 ZBTB1Q9Y2K1 713 aa26.04■■□□□ 1.76
CCDC61-205ENST00000596161 AMIGO3Q86WK7 504 aa26.03■■□□□ 1.76
CCDC61-205ENST00000596161 PDGFDQ9GZP0 370 aaPredicted RBP26.03■■□□□ 1.76
CCDC61-205ENST00000596161 CANXP27824 592 aaKnown RBP26.02■■□□□ 1.76
CCDC61-205ENST00000596161 MTFR1LQ9H019 292 aa26.02■■□□□ 1.76
CCDC61-205ENST00000596161 SOS1Q07889 1333 aaPredicted RBP26.02■■□□□ 1.76
CCDC61-205ENST00000596161 A1BGP04217 495 aa26.01■■□□□ 1.75
CCDC61-205ENST00000596161 ZBTB7AO95365 584 aa26■■□□□ 1.75
CCDC61-205ENST00000596161 HOXB7P09629 217 aa26■■□□□ 1.75
CCDC61-205ENST00000596161 RFC4P35249 363 aa26■■□□□ 1.75
CCDC61-205ENST00000596161 NPM2Q86SE8 214 aaKnown RBP26■■□□□ 1.75
CCDC61-205ENST00000596161 SPON1Q9HCB6 807 aa26■■□□□ 1.75
CCDC61-205ENST00000596161 ZNF521Q96K83 1311 aa25.99■■□□□ 1.75
CCDC61-205ENST00000596161 IL6STP40189 918 aaPredicted RBP25.99■■□□□ 1.75
CCDC61-205ENST00000596161 SMIM5Q71RC9 77 aa25.99■■□□□ 1.75
CCDC61-205ENST00000596161 ARHGEF1Q92888 912 aaKnown RBP25.99■■□□□ 1.75
CCDC61-205ENST00000596161 COL15A1P39059 1388 aa25.98■■□□□ 1.75
CCDC61-205ENST00000596161 ERBB4Q15303 1308 aa25.98■■□□□ 1.75
CCDC61-205ENST00000596161 A0A087WZG4 1122 aa25.98■■□□□ 1.75
CCDC61-205ENST00000596161 EIF5P55010 431 aaKnown RBP25.97■■□□□ 1.75
CCDC61-205ENST00000596161 TSR2Q969E8 191 aaKnown RBP25.97■■□□□ 1.75
CCDC61-205ENST00000596161 MYH16Q9H6N6 1097 aa25.97■■□□□ 1.75
CCDC61-205ENST00000596161 KRT24Q2M2I5 525 aa25.96■■□□□ 1.75
CCDC61-205ENST00000596161 DUSP27Q5VZP5 1158 aa25.96■■□□□ 1.75
CCDC61-205ENST00000596161 EIF2S2P20042 333 aaKnown RBP25.95■■□□□ 1.74
CCDC61-205ENST00000596161 GOLGA2Q08379 1002 aa25.95■■□□□ 1.74
CCDC61-205ENST00000596161 CHMP4AQ9BY43 222 aa25.95■■□□□ 1.74
CCDC61-205ENST00000596161 ATF5Q9Y2D1 282 aaPredicted RBP25.95■■□□□ 1.74
CCDC61-205ENST00000596161 ZNF330Q9Y3S2 320 aaPredicted RBP25.95■■□□□ 1.74
CCDC61-205ENST00000596161 C4AP0C0L4 1744 aa25.94■■□□□ 1.74
CCDC61-205ENST00000596161 FANCIQ9NVI1 1328 aa25.94■■□□□ 1.74
CCDC61-205ENST00000596161 LRP5O75197 1615 aa25.94■■□□□ 1.74
CCDC61-205ENST00000596161 USP42Q9H9J4 1324 aaKnown RBP25.93■■□□□ 1.74
CCDC61-205ENST00000596161 ZPR1O75312 459 aa25.93■■□□□ 1.74
CCDC61-205ENST00000596161 NBPF26B4DH59 902 aa25.92■■□□□ 1.74
CCDC61-205ENST00000596161 HDGFL1Q5TGJ6 251 aa25.92■■□□□ 1.74
CCDC61-205ENST00000596161 NBPF10Q6P3W6 841 aaKnown RBP25.92■■□□□ 1.74
CCDC61-205ENST00000596161 NBPF15Q8N660 670 aa25.92■■□□□ 1.74
CCDC61-205ENST00000596161 E9PSI1 815 aa25.91■■□□□ 1.74
CCDC61-205ENST00000596161 POLD1P28340 1107 aa25.91■■□□□ 1.74
CCDC61-205ENST00000596161 PIP4K2AP48426 406 aaPredicted RBP25.91■■□□□ 1.74
CCDC61-205ENST00000596161 HNRNPUQ00839 825 aaKnown RBP eCLIP25.91■■□□□ 1.74
CCDC61-205ENST00000596161 C8orf58Q8NAV2 365 aa25.91■■□□□ 1.74
CCDC61-205ENST00000596161 NARFQ9UHQ1 456 aa25.91■■□□□ 1.74
CCDC61-205ENST00000596161 MSL1Q68DK7 614 aa25.9■■□□□ 1.74
CCDC61-205ENST00000596161 NLGN1Q8N2Q7 840 aa25.9■■□□□ 1.74
CCDC61-205ENST00000596161 SPINK5Q9NQ38 1064 aaPredicted RBP25.9■■□□□ 1.74
CCDC61-205ENST00000596161 ELL2O00472 640 aaPredicted RBP25.89■■□□□ 1.74
CCDC61-205ENST00000596161 GYS1P13807 737 aa25.89■■□□□ 1.74
CCDC61-205ENST00000596161 NECTIN2Q92692 538 aa25.89■■□□□ 1.74
CCDC61-205ENST00000596161 SRP68Q9UHB9 627 aaKnown RBP25.89■■□□□ 1.74
CCDC61-205ENST00000596161 COL24A1Q17RW2 1714 aa25.88■■□□□ 1.73
CCDC61-205ENST00000596161 DZIP3Q86Y13 1208 aaKnown RBP25.88■■□□□ 1.73
CCDC61-205ENST00000596161 ARXQ96QS3 562 aa25.88■■□□□ 1.73
CCDC61-205ENST00000596161 MYL6BP14649 208 aa25.87■■□□□ 1.73
CCDC61-205ENST00000596161 PTGER2P43116 358 aa25.87■■□□□ 1.73
CCDC61-205ENST00000596161 TWISTNBQ3B726 338 aaPredicted RBP25.87■■□□□ 1.73
CCDC61-205ENST00000596161 USPL1Q5W0Q7 1092 aa25.87■■□□□ 1.73
CCDC61-205ENST00000596161 SGIP1Q9BQI5 828 aa25.87■■□□□ 1.73
CCDC61-205ENST00000596161 DDX21Q9NR30 783 aaKnown RBP eCLIP25.87■■□□□ 1.73
CCDC61-205ENST00000596161 DBF4Q9UBU7 674 aaPredicted RBP25.86■■□□□ 1.73
CCDC61-205ENST00000596161 TBC1D2BQ9UPU7 963 aa25.86■■□□□ 1.73
CCDC61-205ENST00000596161 EXOSC9Q06265 439 aaKnown RBP25.85■■□□□ 1.73
CCDC61-205ENST00000596161 SLFN5Q08AF3 891 aa25.85■■□□□ 1.73
CCDC61-205ENST00000596161 PDIA6Q15084 440 aa25.85■■□□□ 1.73
CCDC61-205ENST00000596161 CCDC30Q5VVM6 783 aa25.85■■□□□ 1.73
CCDC61-205ENST00000596161 TSPYL6Q8N831 410 aa25.85■■□□□ 1.73
CCDC61-205ENST00000596161 PPP1R1BQ9UD71 204 aaPredicted RBP25.85■■□□□ 1.73
CCDC61-205ENST00000596161 CHPF2Q9P2E5 772 aa25.84■■□□□ 1.73
CCDC61-205ENST00000596161 SCN7AQ01118 1682 aa25.83■■□□□ 1.73
CCDC61-205ENST00000596161 RGL2O15211 777 aa25.83■■□□□ 1.73
CCDC61-205ENST00000596161 KIF6Q6ZMV9 814 aa25.83■■□□□ 1.73
CCDC61-205ENST00000596161 CAMTA2O94983 1202 aa25.82■■□□□ 1.72
CCDC61-205ENST00000596161 FKBP8Q14318 412 aa25.82■■□□□ 1.72
CCDC61-205ENST00000596161 HYPKQ9NX55 129 aa25.82■■□□□ 1.72
CCDC61-205ENST00000596161 ZNF652Q9Y2D9 606 aa25.82■■□□□ 1.72
CCDC61-205ENST00000596161 ANXA1P04083 346 aa25.81■■□□□ 1.72
CCDC61-205ENST00000596161 PROSER3Q2NL68 480 aa25.81■■□□□ 1.72
CCDC61-205ENST00000596161 BCL2L12Q9HB09 334 aa25.81■■□□□ 1.72
CCDC61-205ENST00000596161 BCORQ6W2J9 1755 aa25.8■■□□□ 1.72
CCDC61-205ENST00000596161 MMP10P09238 476 aa25.8■■□□□ 1.72
CCDC61-205ENST00000596161 LRP10Q7Z4F1 713 aa25.8■■□□□ 1.72
CCDC61-205ENST00000596161 CDCA7LQ96GN5 454 aa25.8■■□□□ 1.72
CCDC61-205ENST00000596161 STK31Q9BXU1 1019 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms