RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 STARD3NLO95772 234 aa14.62□□□□□ -0.07
XRCC1-204ENST00000594511 HOXB7P09629 217 aa14.62□□□□□ -0.07
XRCC1-204ENST00000594511 ADRA2BP18089 450 aa14.62□□□□□ -0.07
XRCC1-204ENST00000594511 SLC16A10Q8TF71 515 aa14.62□□□□□ -0.07
XRCC1-204ENST00000594511 CCDC87Q9NVE4 849 aa14.62□□□□□ -0.07
XRCC1-204ENST00000594511 PRAMEF22A3QJZ6 481 aa14.61□□□□□ -0.07
XRCC1-204ENST00000594511 TFCP2L1Q9NZI6 479 aa14.61□□□□□ -0.07
XRCC1-204ENST00000594511 SOS1Q07889 1333 aaPredicted RBP14.61□□□□□ -0.07
XRCC1-204ENST00000594511 LAMB4A4D0S4 1761 aa14.6□□□□□ -0.07
XRCC1-204ENST00000594511 EIF5P55010 431 aaKnown RBP14.6□□□□□ -0.07
XRCC1-204ENST00000594511 COL23A1Q86Y22 540 aaPredicted RBP14.6□□□□□ -0.07
XRCC1-204ENST00000594511 TRMT2AQ8IZ69 625 aaKnown RBP14.6□□□□□ -0.07
XRCC1-204ENST00000594511 AK7Q96M32 723 aa14.6□□□□□ -0.07
XRCC1-204ENST00000594511 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
XRCC1-204ENST00000594511 ERBB4Q15303 1308 aa14.6□□□□□ -0.07
XRCC1-204ENST00000594511 IL6STP40189 918 aaPredicted RBP14.59□□□□□ -0.07
XRCC1-204ENST00000594511 PDGFDQ9GZP0 370 aaPredicted RBP14.59□□□□□ -0.07
XRCC1-204ENST00000594511 ZBTB1Q9Y2K1 713 aa14.59□□□□□ -0.07
XRCC1-204ENST00000594511 RTCBQ9Y3I0 505 aaKnown RBP14.59□□□□□ -0.07
XRCC1-204ENST00000594511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.58□□□□□ -0.08
XRCC1-204ENST00000594511 PSDA5PKW4 1024 aaPredicted RBP14.58□□□□□ -0.08
XRCC1-204ENST00000594511 NBPF26B4DH59 902 aa14.58□□□□□ -0.08
XRCC1-204ENST00000594511 GNPATO15228 680 aa14.58□□□□□ -0.08
XRCC1-204ENST00000594511 A1BGP04217 495 aa14.58□□□□□ -0.08
XRCC1-204ENST00000594511 NBPF10Q6P3W6 841 aaKnown RBP14.58□□□□□ -0.08
XRCC1-204ENST00000594511 LRP10Q7Z4F1 713 aa14.58□□□□□ -0.08
XRCC1-204ENST00000594511 NBPF15Q8N660 670 aa14.58□□□□□ -0.08
XRCC1-204ENST00000594511 ARHGEF1Q92888 912 aaKnown RBP14.58□□□□□ -0.08
XRCC1-204ENST00000594511 LAS1LQ9Y4W2 734 aaKnown RBP14.58□□□□□ -0.08
XRCC1-204ENST00000594511 SENP3-EIF4A1A0A087X0R7 540 aa14.57□□□□□ -0.08
XRCC1-204ENST00000594511 PDIA6Q15084 440 aa14.57□□□□□ -0.08
XRCC1-204ENST00000594511 KRT24Q2M2I5 525 aa14.57□□□□□ -0.08
XRCC1-204ENST00000594511 TRAPPC3LQ5T215 181 aa14.57□□□□□ -0.08
XRCC1-204ENST00000594511 SALL2Q9Y467 1007 aaPredicted RBP14.57□□□□□ -0.08
XRCC1-204ENST00000594511 RGL2O15211 777 aa14.56□□□□□ -0.08
XRCC1-204ENST00000594511 GOLGA2Q08379 1002 aa14.56□□□□□ -0.08
XRCC1-204ENST00000594511 SLFN5Q08AF3 891 aa14.56□□□□□ -0.08
XRCC1-204ENST00000594511 DUSP27Q5VZP5 1158 aa14.56□□□□□ -0.08
XRCC1-204ENST00000594511 C8orf58Q8NAV2 365 aa14.56□□□□□ -0.08
XRCC1-204ENST00000594511 SGIP1Q9BQI5 828 aa14.56□□□□□ -0.08
XRCC1-204ENST00000594511 FANCIQ9NVI1 1328 aa14.56□□□□□ -0.08
XRCC1-204ENST00000594511 E9PSI1 815 aa14.55□□□□□ -0.08
XRCC1-204ENST00000594511 TSR2Q969E8 191 aaKnown RBP14.55□□□□□ -0.08
XRCC1-204ENST00000594511 MTFR1LQ9H019 292 aa14.55□□□□□ -0.08
XRCC1-204ENST00000594511 MYH16Q9H6N6 1097 aa14.55□□□□□ -0.08
XRCC1-204ENST00000594511 C4AP0C0L4 1744 aa14.55□□□□□ -0.08
XRCC1-204ENST00000594511 A0A087WZG4 1122 aa14.54□□□□□ -0.08
XRCC1-204ENST00000594511 SMIM5Q71RC9 77 aa14.54□□□□□ -0.08
XRCC1-204ENST00000594511 TSPYL6Q8N831 410 aa14.54□□□□□ -0.08
XRCC1-204ENST00000594511 CHMP4AQ9BY43 222 aa14.54□□□□□ -0.08
XRCC1-204ENST00000594511 NARFQ9UHQ1 456 aa14.54□□□□□ -0.08
XRCC1-204ENST00000594511 COL15A1P39059 1388 aa14.53□□□□□ -0.08
XRCC1-204ENST00000594511 USP42Q9H9J4 1324 aaKnown RBP14.53□□□□□ -0.08
XRCC1-204ENST00000594511 VAMP4O75379 141 aa14.53□□□□□ -0.08
XRCC1-204ENST00000594511 CANXP27824 592 aaKnown RBP14.53□□□□□ -0.08
XRCC1-204ENST00000594511 LRP5O75197 1615 aa14.52□□□□□ -0.08
XRCC1-204ENST00000594511 GYS1P13807 737 aa14.52□□□□□ -0.09
XRCC1-204ENST00000594511 PTGER2P43116 358 aa14.52□□□□□ -0.09
XRCC1-204ENST00000594511 BCL2L12Q9HB09 334 aa14.52□□□□□ -0.09
XRCC1-204ENST00000594511 DDX21Q9NR30 783 aaKnown RBP eCLIP14.52□□□□□ -0.09
XRCC1-204ENST00000594511 ZBED9Q6R2W3 1325 aa14.51□□□□□ -0.09
XRCC1-204ENST00000594511 RFC4P35249 363 aa14.51□□□□□ -0.09
XRCC1-204ENST00000594511 CDCA7LQ96GN5 454 aa14.51□□□□□ -0.09
XRCC1-204ENST00000594511 SPON1Q9HCB6 807 aa14.51□□□□□ -0.09
XRCC1-204ENST00000594511 PHF14O94880 888 aa14.5□□□□□ -0.09
XRCC1-204ENST00000594511 TM4SF1P30408 202 aa14.5□□□□□ -0.09
XRCC1-204ENST00000594511 HNRNPUQ00839 825 aaKnown RBP eCLIP14.5□□□□□ -0.09
XRCC1-204ENST00000594511 EXOSC9Q06265 439 aaKnown RBP14.5□□□□□ -0.09
XRCC1-204ENST00000594511 TWISTNBQ3B726 338 aaPredicted RBP14.5□□□□□ -0.09
XRCC1-204ENST00000594511 HDGFL1Q5TGJ6 251 aa14.5□□□□□ -0.09
XRCC1-204ENST00000594511 NLGN1Q8N2Q7 840 aa14.5□□□□□ -0.09
XRCC1-204ENST00000594511 DBF4Q9UBU7 674 aaPredicted RBP14.5□□□□□ -0.09
XRCC1-204ENST00000594511 CACNA1FO60840 1977 aa14.49□□□□□ -0.09
XRCC1-204ENST00000594511 ERVV-1B6SEH8 477 aa14.49□□□□□ -0.09
XRCC1-204ENST00000594511 CAMTA2O94983 1202 aa14.49□□□□□ -0.09
XRCC1-204ENST00000594511 ZBTB7AO95365 584 aa14.49□□□□□ -0.09
XRCC1-204ENST00000594511 EIF2S2P20042 333 aaKnown RBP14.49□□□□□ -0.09
XRCC1-204ENST00000594511 PROSER3Q2NL68 480 aa14.49□□□□□ -0.09
XRCC1-204ENST00000594511 CLEC4GQ6UXB4 293 aa14.49□□□□□ -0.09
XRCC1-204ENST00000594511 BCORQ6W2J9 1755 aa14.48□□□□□ -0.09
XRCC1-204ENST00000594511 ELL2O00472 640 aaPredicted RBP14.48□□□□□ -0.09
XRCC1-204ENST00000594511 PIP4K2AP48426 406 aaPredicted RBP14.48□□□□□ -0.09
XRCC1-204ENST00000594511 CCDC30Q5VVM6 783 aa14.48□□□□□ -0.09
XRCC1-204ENST00000594511 ZNF428Q96B54 188 aa14.48□□□□□ -0.09
XRCC1-204ENST00000594511 HYPKQ9NX55 129 aa14.48□□□□□ -0.09
XRCC1-204ENST00000594511 SRP68Q9UHB9 627 aaKnown RBP14.48□□□□□ -0.09
XRCC1-204ENST00000594511 SCN7AQ01118 1682 aa14.48□□□□□ -0.09
XRCC1-204ENST00000594511 ZPR1O75312 459 aa14.47□□□□□ -0.09
XRCC1-204ENST00000594511 CT47B1P0C2W7 299 aaPredicted RBP14.47□□□□□ -0.09
XRCC1-204ENST00000594511 FKBP8Q14318 412 aa14.47□□□□□ -0.09
XRCC1-204ENST00000594511 USPL1Q5W0Q7 1092 aa14.47□□□□□ -0.09
XRCC1-204ENST00000594511 DZIP3Q86Y13 1208 aaKnown RBP14.47□□□□□ -0.09
XRCC1-204ENST00000594511 CHPF2Q9P2E5 772 aa14.47□□□□□ -0.09
XRCC1-204ENST00000594511 TBC1D2BQ9UPU7 963 aa14.47□□□□□ -0.09
XRCC1-204ENST00000594511 ATF5Q9Y2D1 282 aaPredicted RBP14.47□□□□□ -0.09
XRCC1-204ENST00000594511 MAP3K15Q6ZN16 1313 aa14.46□□□□□ -0.09
XRCC1-204ENST00000594511 TTLL7Q6ZT98 887 aa14.46□□□□□ -0.09
XRCC1-204ENST00000594511 MSH5O43196 834 aa14.45□□□□□ -0.1
XRCC1-204ENST00000594511 MYL6BP14649 208 aa14.45□□□□□ -0.1
XRCC1-204ENST00000594511 COPS6Q7L5N1 327 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms