RNA–Protein interactions for RNA: ENST00000592871.1

LIN37-208, Transcript of lin-37 DREAM MuvB core complex component, human

TSL 4

Gene LIN37, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LIN37-208	ENST00000592871	STARD3NL	O95772	234 aa		13.57	□□□□□ -0.24
LIN37-208	ENST00000592871	RFC4	P35249	363 aa		13.57	□□□□□ -0.24
LIN37-208	ENST00000592871	NEUROD2	Q15784	382 aa		13.57	□□□□□ -0.24
LIN37-208	ENST00000592871	KLHL34	Q8N239	644 aa		13.57	□□□□□ -0.24
LIN37-208	ENST00000592871	MIS18A	Q9NYP9	233 aa		13.57	□□□□□ -0.24
LIN37-208	ENST00000592871	SOS1	Q07889	1333 aa	Predicted RBP	13.57	□□□□□ -0.24
LIN37-208	ENST00000592871	PNISR	Q8TF01	805 aa	Known RBP	13.56	□□□□□ -0.24
LIN37-208	ENST00000592871	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.56	□□□□□ -0.24
LIN37-208	ENST00000592871	MRS2	Q9HD23	443 aa		13.56	□□□□□ -0.24
LIN37-208	ENST00000592871	COL15A1	P39059	1388 aa		13.56	□□□□□ -0.24
LIN37-208	ENST00000592871	CANX	P27824	592 aa	Known RBP	13.55	□□□□□ -0.24
LIN37-208	ENST00000592871	SYT17	Q9BSW7	474 aa		13.55	□□□□□ -0.24
LIN37-208	ENST00000592871	SRP68	Q9UHB9	627 aa	Known RBP	13.55	□□□□□ -0.24
LIN37-208	ENST00000592871	USP42	Q9H9J4	1324 aa	Known RBP	13.55	□□□□□ -0.24
LIN37-208	ENST00000592871	LAMB4	A4D0S4	1761 aa		13.55	□□□□□ -0.24
LIN37-208	ENST00000592871	PRAMEF22	A3QJZ6	481 aa		13.54	□□□□□ -0.24
LIN37-208	ENST00000592871	SNRPA1	P09661	255 aa	Known RBP	13.54	□□□□□ -0.24
LIN37-208	ENST00000592871	GYS1	P13807	737 aa		13.54	□□□□□ -0.24
LIN37-208	ENST00000592871	APAF1	O14727	1248 aa		13.53	□□□□□ -0.24
LIN37-208	ENST00000592871	MMP10	P09238	476 aa		13.53	□□□□□ -0.24
LIN37-208	ENST00000592871	TSPYL4	Q9UJ04	414 aa		13.53	□□□□□ -0.24
LIN37-208	ENST00000592871	TRIM35	Q9UPQ4	493 aa		13.53	□□□□□ -0.24
LIN37-208	ENST00000592871	ZPR1	O75312	459 aa		13.52	□□□□□ -0.25
LIN37-208	ENST00000592871	A1BG	P04217	495 aa		13.52	□□□□□ -0.25
LIN37-208	ENST00000592871	EIF5	P55010	431 aa	Known RBP	13.52	□□□□□ -0.25
LIN37-208	ENST00000592871	EIF4A1	P60842	406 aa	Known RBP	13.52	□□□□□ -0.25
LIN37-208	ENST00000592871	NLGN1	Q8N2Q7	840 aa		13.52	□□□□□ -0.25
LIN37-208	ENST00000592871	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.52	□□□□□ -0.25
LIN37-208	ENST00000592871	USP16	Q9Y5T5	823 aa		13.52	□□□□□ -0.25
LIN37-208	ENST00000592871	SCN7A	Q01118	1682 aa		13.51	□□□□□ -0.25
LIN37-208	ENST00000592871	FKBP8	Q14318	412 aa		13.51	□□□□□ -0.25
LIN37-208	ENST00000592871	USPL1	Q5W0Q7	1092 aa		13.51	□□□□□ -0.25
LIN37-208	ENST00000592871	NLGN2	Q8NFZ4	835 aa		13.51	□□□□□ -0.25
LIN37-208	ENST00000592871	GOLGB1	Q14789	3259 aa	Known RBP	13.51	□□□□□ -0.25
LIN37-208	ENST00000592871	GIGYF1	O75420	1035 aa	Predicted RBP	13.5	□□□□□ -0.25
LIN37-208	ENST00000592871	IL6ST	P40189	918 aa	Predicted RBP	13.5	□□□□□ -0.25
LIN37-208	ENST00000592871	PIP4K2A	P48426	406 aa	Predicted RBP	13.5	□□□□□ -0.25
LIN37-208	ENST00000592871	NARF	Q9UHQ1	456 aa		13.5	□□□□□ -0.25
LIN37-208	ENST00000592871		A0A087WZG4	1122 aa		13.49	□□□□□ -0.25
LIN37-208	ENST00000592871	NPM2	Q86SE8	214 aa	Known RBP	13.49	□□□□□ -0.25
LIN37-208	ENST00000592871	BABAM1	Q9NWV8	329 aa		13.49	□□□□□ -0.25
LIN37-208	ENST00000592871	LAS1L	Q9Y4W2	734 aa	Known RBP	13.49	□□□□□ -0.25
LIN37-208	ENST00000592871	BCOR	Q6W2J9	1755 aa		13.48	□□□□□ -0.25
LIN37-208	ENST00000592871	DCAF8L1	A6NGE4	600 aa		13.48	□□□□□ -0.25
LIN37-208	ENST00000592871	TBC1D2B	Q9UPU7	963 aa		13.48	□□□□□ -0.25
LIN37-208	ENST00000592871	CD2AP	Q9Y5K6	639 aa		13.48	□□□□□ -0.25
LIN37-208	ENST00000592871	PARP3	Q9Y6F1	533 aa		13.48	□□□□□ -0.25
LIN37-208	ENST00000592871	KIF13B	Q9NQT8	1826 aa		13.48	□□□□□ -0.25
LIN37-208	ENST00000592871	C10orf71	Q711Q0	1435 aa		13.47	□□□□□ -0.25
LIN37-208	ENST00000592871	SENP3-EIF4A1	A0A087X0R7	540 aa		13.47	□□□□□ -0.25
LIN37-208	ENST00000592871	NBPF26	B4DH59	902 aa		13.47	□□□□□ -0.25
LIN37-208	ENST00000592871	CHL1	O00533	1208 aa		13.47	□□□□□ -0.25
LIN37-208	ENST00000592871	DDR1	Q08345	913 aa		13.47	□□□□□ -0.25
LIN37-208	ENST00000592871	NBPF10	Q6P3W6	841 aa	Known RBP	13.47	□□□□□ -0.25
LIN37-208	ENST00000592871	NBPF15	Q8N660	670 aa		13.47	□□□□□ -0.25
LIN37-208	ENST00000592871	BCL2L12	Q9HB09	334 aa		13.47	□□□□□ -0.25
LIN37-208	ENST00000592871	AFDN	P55196	1824 aa	Known RBP	13.46	□□□□□ -0.25
LIN37-208	ENST00000592871	UTRN	P46939	3433 aa		13.46	□□□□□ -0.25
LIN37-208	ENST00000592871	DZIP3	Q86Y13	1208 aa	Known RBP	13.46	□□□□□ -0.25
LIN37-208	ENST00000592871	POLRMT	O00411	1230 aa	Known RBP	13.45	□□□□□ -0.26
LIN37-208	ENST00000592871	CAMTA2	O94983	1202 aa		13.45	□□□□□ -0.26
LIN37-208	ENST00000592871	TM4SF1	P30408	202 aa		13.45	□□□□□ -0.26
LIN37-208	ENST00000592871	CALD1	Q05682	793 aa	Known RBP	13.45	□□□□□ -0.26
LIN37-208	ENST00000592871	NFIX	Q14938	502 aa		13.45	□□□□□ -0.26
LIN37-208	ENST00000592871	PELP1	Q8IZL8	1130 aa	Known RBP	13.45	□□□□□ -0.26
LIN37-208	ENST00000592871	FAM9B	Q8IZU0	186 aa		13.45	□□□□□ -0.26
LIN37-208	ENST00000592871	CFAP44	Q96MT7	982 aa		13.45	□□□□□ -0.26
LIN37-208	ENST00000592871	KIAA1551	Q9HCM1	1747 aa		13.44	□□□□□ -0.26
LIN37-208	ENST00000592871	PXDNL	A1KZ92	1463 aa		13.44	□□□□□ -0.26
LIN37-208	ENST00000592871	GPR162	Q16538	588 aa		13.44	□□□□□ -0.26
LIN37-208	ENST00000592871	KRT24	Q2M2I5	525 aa		13.44	□□□□□ -0.26
LIN37-208	ENST00000592871	BICDL1	Q6ZP65	573 aa		13.44	□□□□□ -0.26
LIN37-208	ENST00000592871	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.44	□□□□□ -0.26
LIN37-208	ENST00000592871	NRXN2	Q9P2S2	1712 aa		13.44	□□□□□ -0.26
LIN37-208	ENST00000592871	EIF2S2	P20042	333 aa	Known RBP	13.43	□□□□□ -0.26
LIN37-208	ENST00000592871	TBC1D9B	Q66K14	1250 aa		13.43	□□□□□ -0.26
LIN37-208	ENST00000592871	NGEF	Q8N5V2	710 aa		13.43	□□□□□ -0.26
LIN37-208	ENST00000592871	MBIP	Q9NS73	344 aa		13.43	□□□□□ -0.26
LIN37-208	ENST00000592871	IFT57	Q9NWB7	429 aa		13.43	□□□□□ -0.26
LIN37-208	ENST00000592871	ERBB4	Q15303	1308 aa		13.42	□□□□□ -0.26
LIN37-208	ENST00000592871	ZNF853	P0CG23	659 aa		13.42	□□□□□ -0.26
LIN37-208	ENST00000592871	MYL6B	P14649	208 aa		13.42	□□□□□ -0.26
LIN37-208	ENST00000592871	GNAI1	P63096	354 aa		13.42	□□□□□ -0.26
LIN37-208	ENST00000592871	WWC3	Q9ULE0	1092 aa		13.42	□□□□□ -0.26
LIN37-208	ENST00000592871	SERPINB2	P05120	415 aa		13.41	□□□□□ -0.26
LIN37-208	ENST00000592871	CCDC27	Q2M243	656 aa		13.41	□□□□□ -0.26
LIN37-208	ENST00000592871	WWC1	Q8IX03	1113 aa		13.41	□□□□□ -0.26
LIN37-208	ENST00000592871	NECTIN2	Q92692	538 aa		13.41	□□□□□ -0.26
LIN37-208	ENST00000592871	ZNF652	Q9Y2D9	606 aa		13.41	□□□□□ -0.26
LIN37-208	ENST00000592871	CARMIL3	Q8ND23	1372 aa		13.41	□□□□□ -0.26
LIN37-208	ENST00000592871	CHD4	Q14839	1912 aa		13.41	□□□□□ -0.26
LIN37-208	ENST00000592871	YBX3	P16989	372 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
LIN37-208	ENST00000592871	TGFB2	P61812	414 aa		13.4	□□□□□ -0.26
LIN37-208	ENST00000592871	PROSER3	Q2NL68	480 aa		13.4	□□□□□ -0.26
LIN37-208	ENST00000592871	SALL2	Q9Y467	1007 aa	Predicted RBP	13.4	□□□□□ -0.26
LIN37-208	ENST00000592871	NUP98	P52948	1817 aa		13.4	□□□□□ -0.26
LIN37-208	ENST00000592871	BRCA1	P38398	1863 aa	Known RBP	13.4	□□□□□ -0.26
LIN37-208	ENST00000592871		A0A0G2JLW4	131 aa		13.39	□□□□□ -0.27
LIN37-208	ENST00000592871	ANXA1	P04083	346 aa		13.39	□□□□□ -0.27
LIN37-208	ENST00000592871	HOXB7	P09629	217 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms