RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 RTCBQ9Y3I0 505 aaKnown RBP24.5■■□□□ 1.51
MBD1-223ENST00000590215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.49■■□□□ 1.51
MBD1-223ENST00000590215 ADRA2BP18089 450 aa24.49■■□□□ 1.51
MBD1-223ENST00000590215 IFT57Q9NWB7 429 aa24.49■■□□□ 1.51
MBD1-223ENST00000590215 GIGYF1O75420 1035 aaPredicted RBP24.48■■□□□ 1.51
MBD1-223ENST00000590215 PRAMEF22A3QJZ6 481 aa24.47■■□□□ 1.51
MBD1-223ENST00000590215 SMIM5Q71RC9 77 aa24.47■■□□□ 1.51
MBD1-223ENST00000590215 MTFR1LQ9H019 292 aa24.47■■□□□ 1.51
MBD1-223ENST00000590215 USP16Q9Y5T5 823 aa24.47■■□□□ 1.51
MBD1-223ENST00000590215 IL16Q14005 1332 aa24.46■■□□□ 1.51
MBD1-223ENST00000590215 SENP3-EIF4A1A0A087X0R7 540 aa24.46■■□□□ 1.51
MBD1-223ENST00000590215 GNAI1P63096 354 aa24.46■■□□□ 1.51
MBD1-223ENST00000590215 ZBTB1Q9Y2K1 713 aa24.46■■□□□ 1.51
MBD1-223ENST00000590215 SRCAPQ6ZRS2 3230 aa24.45■■□□□ 1.5
MBD1-223ENST00000590215 SOS1Q07889 1333 aaPredicted RBP24.45■■□□□ 1.5
MBD1-223ENST00000590215 PHF14O94880 888 aa24.45■■□□□ 1.5
MBD1-223ENST00000590215 TRAPPC3LQ5T215 181 aa24.45■■□□□ 1.5
MBD1-223ENST00000590215 ZBTB7AO95365 584 aa24.44■■□□□ 1.5
MBD1-223ENST00000590215 ARHGEF1Q92888 912 aaKnown RBP24.44■■□□□ 1.5
MBD1-223ENST00000590215 SPON1Q9HCB6 807 aa24.44■■□□□ 1.5
MBD1-223ENST00000590215 MBIPQ9NS73 344 aa24.44■■□□□ 1.5
MBD1-223ENST00000590215 LAS1LQ9Y4W2 734 aaKnown RBP24.44■■□□□ 1.5
MBD1-223ENST00000590215 WDR63Q8IWG1 891 aa24.43■■□□□ 1.5
MBD1-223ENST00000590215 LRP5O75197 1615 aa24.43■■□□□ 1.5
MBD1-223ENST00000590215 EIF5P55010 431 aaKnown RBP24.42■■□□□ 1.5
MBD1-223ENST00000590215 SGIP1Q9BQI5 828 aa24.42■■□□□ 1.5
MBD1-223ENST00000590215 ZNF521Q96K83 1311 aa24.41■■□□□ 1.5
MBD1-223ENST00000590215 A1BGP04217 495 aa24.41■■□□□ 1.5
MBD1-223ENST00000590215 MSH5O43196 834 aa24.4■■□□□ 1.5
MBD1-223ENST00000590215 IL6STP40189 918 aaPredicted RBP24.4■■□□□ 1.5
MBD1-223ENST00000590215 PTGER2P43116 358 aa24.4■■□□□ 1.5
MBD1-223ENST00000590215 SALL2Q9Y467 1007 aaPredicted RBP24.4■■□□□ 1.5
MBD1-223ENST00000590215 COL24A1Q17RW2 1714 aa24.4■■□□□ 1.5
MBD1-223ENST00000590215 CANXP27824 592 aaKnown RBP24.39■■□□□ 1.49
MBD1-223ENST00000590215 ATF5Q9Y2D1 282 aaPredicted RBP24.39■■□□□ 1.49
MBD1-223ENST00000590215 LAMB4A4D0S4 1761 aa24.39■■□□□ 1.49
MBD1-223ENST00000590215 HOXB7P09629 217 aa24.38■■□□□ 1.49
MBD1-223ENST00000590215 COL15A1P39059 1388 aa24.38■■□□□ 1.49
MBD1-223ENST00000590215 NBPF26B4DH59 902 aa24.37■■□□□ 1.49
MBD1-223ENST00000590215 RFC4P35249 363 aa24.37■■□□□ 1.49
MBD1-223ENST00000590215 KRT24Q2M2I5 525 aa24.37■■□□□ 1.49
MBD1-223ENST00000590215 NBPF10Q6P3W6 841 aaKnown RBP24.37■■□□□ 1.49
MBD1-223ENST00000590215 NBPF15Q8N660 670 aa24.37■■□□□ 1.49
MBD1-223ENST00000590215 ERBB4Q15303 1308 aa24.35■■□□□ 1.49
MBD1-223ENST00000590215 USP42Q9H9J4 1324 aaKnown RBP24.35■■□□□ 1.49
MBD1-223ENST00000590215 C4AP0C0L4 1744 aa24.35■■□□□ 1.49
MBD1-223ENST00000590215 A0A087WZG4 1122 aa24.35■■□□□ 1.49
MBD1-223ENST00000590215 GYS1P13807 737 aa24.34■■□□□ 1.49
MBD1-223ENST00000590215 NARFQ9UHQ1 456 aa24.34■■□□□ 1.49
MBD1-223ENST00000590215 DUSP27Q5VZP5 1158 aa24.33■■□□□ 1.49
MBD1-223ENST00000590215 PIP4K2AP48426 406 aaPredicted RBP24.32■■□□□ 1.48
MBD1-223ENST00000590215 MSL1Q68DK7 614 aa24.32■■□□□ 1.48
MBD1-223ENST00000590215 NLGN1Q8N2Q7 840 aa24.32■■□□□ 1.48
MBD1-223ENST00000590215 TSR2Q969E8 191 aaKnown RBP24.32■■□□□ 1.48
MBD1-223ENST00000590215 SPINK5Q9NQ38 1064 aaPredicted RBP24.32■■□□□ 1.48
MBD1-223ENST00000590215 SRP68Q9UHB9 627 aaKnown RBP24.32■■□□□ 1.48
MBD1-223ENST00000590215 ZPR1O75312 459 aa24.31■■□□□ 1.48
MBD1-223ENST00000590215 C8orf58Q8NAV2 365 aa24.31■■□□□ 1.48
MBD1-223ENST00000590215 EIF2S2P20042 333 aaKnown RBP24.3■■□□□ 1.48
MBD1-223ENST00000590215 POLD1P28340 1107 aa24.3■■□□□ 1.48
MBD1-223ENST00000590215 PDIA6Q15084 440 aa24.3■■□□□ 1.48
MBD1-223ENST00000590215 LRP10Q7Z4F1 713 aa24.3■■□□□ 1.48
MBD1-223ENST00000590215 FANCIQ9NVI1 1328 aa24.3■■□□□ 1.48
MBD1-223ENST00000590215 USPL1Q5W0Q7 1092 aa24.29■■□□□ 1.48
MBD1-223ENST00000590215 NPM2Q86SE8 214 aaKnown RBP24.28■■□□□ 1.48
MBD1-223ENST00000590215 MYH16Q9H6N6 1097 aa24.28■■□□□ 1.48
MBD1-223ENST00000590215 BCL2L12Q9HB09 334 aa24.28■■□□□ 1.48
MBD1-223ENST00000590215 RGL2O15211 777 aa24.27■■□□□ 1.48
MBD1-223ENST00000590215 CAMTA2O94983 1202 aa24.27■■□□□ 1.48
MBD1-223ENST00000590215 FKBP8Q14318 412 aa24.27■■□□□ 1.48
MBD1-223ENST00000590215 HDGFL1Q5TGJ6 251 aa24.27■■□□□ 1.48
MBD1-223ENST00000590215 TSPYL6Q8N831 410 aa24.27■■□□□ 1.48
MBD1-223ENST00000590215 ARXQ96QS3 562 aa24.27■■□□□ 1.48
MBD1-223ENST00000590215 TBC1D2BQ9UPU7 963 aa24.27■■□□□ 1.48
MBD1-223ENST00000590215 ZNF330Q9Y3S2 320 aaPredicted RBP24.27■■□□□ 1.48
MBD1-223ENST00000590215 GOLGA2Q08379 1002 aa24.26■■□□□ 1.47
MBD1-223ENST00000590215 DZIP3Q86Y13 1208 aaKnown RBP24.26■■□□□ 1.47
MBD1-223ENST00000590215 DDX21Q9NR30 783 aaKnown RBP eCLIP24.26■■□□□ 1.47
MBD1-223ENST00000590215 ELL2O00472 640 aaPredicted RBP24.25■■□□□ 1.47
MBD1-223ENST00000590215 CHMP4AQ9BY43 222 aa24.25■■□□□ 1.47
MBD1-223ENST00000590215 E9PSI1 815 aa24.24■■□□□ 1.47
MBD1-223ENST00000590215 MMP10P09238 476 aa24.24■■□□□ 1.47
MBD1-223ENST00000590215 TM4SF1P30408 202 aa24.24■■□□□ 1.47
MBD1-223ENST00000590215 PROSER3Q2NL68 480 aa24.24■■□□□ 1.47
MBD1-223ENST00000590215 NECTIN2Q92692 538 aa24.24■■□□□ 1.47
MBD1-223ENST00000590215 PPP1R1BQ9UD71 204 aaPredicted RBP24.24■■□□□ 1.47
MBD1-223ENST00000590215 MYL6BP14649 208 aa24.23■■□□□ 1.47
MBD1-223ENST00000590215 CLEC4GQ6UXB4 293 aa24.23■■□□□ 1.47
MBD1-223ENST00000590215 CHPF2Q9P2E5 772 aa24.23■■□□□ 1.47
MBD1-223ENST00000590215 DBF4Q9UBU7 674 aaPredicted RBP24.23■■□□□ 1.47
MBD1-223ENST00000590215 SCN7AQ01118 1682 aa24.23■■□□□ 1.47
MBD1-223ENST00000590215 SLFN5Q08AF3 891 aa24.22■■□□□ 1.47
MBD1-223ENST00000590215 TWISTNBQ3B726 338 aaPredicted RBP24.22■■□□□ 1.47
MBD1-223ENST00000590215 ERVV-1B6SEH8 477 aa24.21■■□□□ 1.47
MBD1-223ENST00000590215 ANXA1P04083 346 aa24.21■■□□□ 1.47
MBD1-223ENST00000590215 EXOSC9Q06265 439 aaKnown RBP24.21■■□□□ 1.47
MBD1-223ENST00000590215 TTLL7Q6ZT98 887 aa24.21■■□□□ 1.47
MBD1-223ENST00000590215 DDR1Q08345 913 aa24.2■■□□□ 1.46
MBD1-223ENST00000590215 NFIXQ14938 502 aa24.2■■□□□ 1.46
MBD1-223ENST00000590215 CCDC30Q5VVM6 783 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms