RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 CCDC192P0DO97 292 aa9.06□□□□□ -0.96
LAMA3-210ENST00000588770 CCDC26Q8TAB7 109 aa9.06□□□□□ -0.96
LAMA3-210ENST00000588770 ANKRD18BA2A2Z9 1011 aa9.06□□□□□ -0.96
LAMA3-210ENST00000588770 BCAR3O75815 825 aa9.06□□□□□ -0.96
LAMA3-210ENST00000588770 PRPHP41219 470 aa9.06□□□□□ -0.96
LAMA3-210ENST00000588770 ATP8B1O43520 1251 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 KIF4AO95239 1232 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 ERCC6LQ2NKX8 1250 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 IQCA1Q86XH1 822 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 CEP112Q8N8E3 955 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 TRIM4Q9C037 500 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 CHUKO15111 745 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 SPTY2D1Q68D10 685 aaPredicted RBP9.05□□□□□ -0.96
LAMA3-210ENST00000588770 FAM177A1Q8N128 213 aaPredicted RBP9.05□□□□□ -0.96
LAMA3-210ENST00000588770 ATL2Q8NHH9 583 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 STAG1Q8WVM7 1258 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 MYBL2P10244 700 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 TPP2P29144 1249 aaPredicted RBP9.05□□□□□ -0.96
LAMA3-210ENST00000588770 CLCN6P51797 869 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 GOLGA6L7A0A1B0GV03 622 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 RBM26Q5T8P6 1007 aaKnown RBP9.05□□□□□ -0.96
LAMA3-210ENST00000588770 CWC27Q6UX04 472 aaKnown RBP9.05□□□□□ -0.96
LAMA3-210ENST00000588770 ZBTB10Q96DT7 871 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 SWAP70Q9UH65 585 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 ADAM21Q9UKJ8 722 aa9.05□□□□□ -0.96
LAMA3-210ENST00000588770 NPC1L1Q9UHC9 1359 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 NEMFO60524 1076 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 SEPT14Q6ZU15 432 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.04□□□□□ -0.96
LAMA3-210ENST00000588770 FRMD4BQ9Y2L6 1034 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 RRBP1Q9P2E9 1410 aaKnown RBP9.04□□□□□ -0.96
LAMA3-210ENST00000588770 COQ9O75208 318 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 RBM6P78332 1123 aaKnown RBP9.04□□□□□ -0.96
LAMA3-210ENST00000588770 TCHPQ9BT92 498 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 SRRTQ9BXP5 876 aaKnown RBP9.04□□□□□ -0.96
LAMA3-210ENST00000588770 TEX13AQ9BXU3 409 aaPredicted RBP9.04□□□□□ -0.96
LAMA3-210ENST00000588770 KIF9Q9HAQ2 790 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 FMN1Q68DA7 1419 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 HDGFP51858 240 aaKnown RBP9.04□□□□□ -0.96
LAMA3-210ENST00000588770 WDR78Q5VTH9 848 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 MAP3K1Q13233 1512 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 HNRNPH1P31943 449 aaKnown RBP9.04□□□□□ -0.96
LAMA3-210ENST00000588770 RPS6KL1Q9Y6S9 549 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 CAPN7Q9Y6W3 813 aa9.04□□□□□ -0.96
LAMA3-210ENST00000588770 SNW1Q13573 536 aaKnown RBP9.03□□□□□ -0.96
LAMA3-210ENST00000588770 PDE3AQ14432 1141 aa9.03□□□□□ -0.96
LAMA3-210ENST00000588770 CEP85LQ5SZL2 805 aa9.03□□□□□ -0.96
LAMA3-210ENST00000588770 GAS2L2Q8NHY3 880 aa9.03□□□□□ -0.96
LAMA3-210ENST00000588770 GOLGA6L9A6NEM1 432 aa9.03□□□□□ -0.96
LAMA3-210ENST00000588770 CCDC175P0C221 793 aa9.03□□□□□ -0.96
LAMA3-210ENST00000588770 C11orf91Q3C1V1 193 aa9.03□□□□□ -0.96
LAMA3-210ENST00000588770 SPDL1Q96EA4 605 aa9.03□□□□□ -0.96
LAMA3-210ENST00000588770 ZNF396Q96N95 335 aaPredicted RBP9.03□□□□□ -0.96
LAMA3-210ENST00000588770 ZCCHC17Q9NP64 241 aaKnown RBP9.03□□□□□ -0.96
LAMA3-210ENST00000588770 PRDM2Q13029 1718 aa9.03□□□□□ -0.96
LAMA3-210ENST00000588770 PABPN1Q86U42 306 aaKnown RBP eCLIP9.03□□□□□ -0.96
LAMA3-210ENST00000588770 TRIM42Q8IWZ5 723 aa9.03□□□□□ -0.96
LAMA3-210ENST00000588770 USP47Q96K76 1375 aa9.03□□□□□ -0.96
LAMA3-210ENST00000588770 URI1O94763 535 aaPredicted RBP9.02□□□□□ -0.96
LAMA3-210ENST00000588770 ZKSCAN2Q63HK3 967 aa9.02□□□□□ -0.96
LAMA3-210ENST00000588770 SMARCC1Q92922 1105 aaPredicted RBP9.02□□□□□ -0.96
LAMA3-210ENST00000588770 SCLT1Q96NL6 688 aa9.02□□□□□ -0.96
LAMA3-210ENST00000588770 NAT10Q9H0A0 1025 aaKnown RBP9.02□□□□□ -0.96
LAMA3-210ENST00000588770 ENO4A6NNW6 628 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 KIF3BO15066 747 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 ARMC3Q5W041 872 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 GET4Q7L5D6 327 aaPredicted RBP9.02□□□□□ -0.97
LAMA3-210ENST00000588770 MICAL1Q8TDZ2 1067 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 BAG1Q99933 345 aaPredicted RBP9.02□□□□□ -0.97
LAMA3-210ENST00000588770 ZNHIT6Q9NWK9 470 aaKnown RBP9.02□□□□□ -0.97
LAMA3-210ENST00000588770 ATP6V1DQ9Y5K8 247 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 CA8P35219 290 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 RPS6KA3P51812 740 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 RNF187Q5TA31 235 aaPredicted RBP9.02□□□□□ -0.97
LAMA3-210ENST00000588770 BICD1Q96G01 975 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 ADAMTS8Q9UP79 889 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.02□□□□□ -0.97
LAMA3-210ENST00000588770 FYB1O15117 783 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 SESN3P58005 492 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 ATP2B2Q01814 1243 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 GPT2Q8TD30 523 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 PSD3Q9NYI0 1048 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 ARHGAP35Q9NRY4 1499 aa9.02□□□□□ -0.97
LAMA3-210ENST00000588770 OATP04181 439 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 LUZP1Q86V48 1076 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 GBP3Q9H0R5 595 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 SRGAP3O43295 1099 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 ACBD5Q5T8D3 534 aaPredicted RBP9.01□□□□□ -0.97
LAMA3-210ENST00000588770 CCDC50Q8IVM0 306 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 CAGE1Q8TC20 777 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 TSPY4P0CV99 314 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 TSPY10P0CW01 314 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 LAMB3Q13751 1172 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 FBXW7Q969H0 707 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 MAGEA8P43361 318 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 TMEM165Q9HC07 324 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 ELP1O95163 1332 aa9.01□□□□□ -0.97
LAMA3-210ENST00000588770 RAD21O60216 631 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 PPFIA4O75335 1185 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 PDE6BP35913 854 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms