RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 PELP1Q8IZL8 1130 aaKnown RBP14.04□□□□□ -0.16
LAMA3-210ENST00000588770 MYT1Q01538 1121 aa13.92□□□□□ -0.18
LAMA3-210ENST00000588770 TTBK1Q5TCY1 1321 aaPredicted RBP13.19□□□□□ -0.3
LAMA3-210ENST00000588770 ERICH6Q7L0X2 663 aa12.82□□□□□ -0.36
LAMA3-210ENST00000588770 HRCP23327 699 aa12.73□□□□□ -0.37
LAMA3-210ENST00000588770 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
LAMA3-210ENST00000588770 CENPBP07199 599 aaPredicted RBP12.47□□□□□ -0.41
LAMA3-210ENST00000588770 BCL11AQ9H165 835 aa12.47□□□□□ -0.41
LAMA3-210ENST00000588770 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
LAMA3-210ENST00000588770 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
LAMA3-210ENST00000588770 PPARGC1BQ86YN6 1023 aaKnown RBP12.37□□□□□ -0.43
LAMA3-210ENST00000588770 PCGF6Q9BYE7 350 aa12.28□□□□□ -0.44
LAMA3-210ENST00000588770 FAM9AQ8IZU1 332 aaPredicted RBP12.16□□□□□ -0.46
LAMA3-210ENST00000588770 APLP2Q06481 763 aa12.14□□□□□ -0.47
LAMA3-210ENST00000588770 GTF3C3Q9Y5Q9 886 aa12.1□□□□□ -0.47
LAMA3-210ENST00000588770 ACIN1Q9UKV3 1341 aaKnown RBP12.06□□□□□ -0.48
LAMA3-210ENST00000588770 ZEB1P37275 1124 aaPredicted RBP12.05□□□□□ -0.48
LAMA3-210ENST00000588770 EIF5BO60841 1220 aaKnown RBP11.95□□□□□ -0.5
LAMA3-210ENST00000588770 ANP32EQ9BTT0 268 aa11.94□□□□□ -0.5
LAMA3-210ENST00000588770 SUPT5HO00267 1087 aaKnown RBP11.9□□□□□ -0.5
LAMA3-210ENST00000588770 NEUROD1Q13562 356 aa11.86□□□□□ -0.51
LAMA3-210ENST00000588770 DAXXQ9UER7 740 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-210ENST00000588770 CCER1Q8TC90 406 aaPredicted RBP11.77□□□□□ -0.53
LAMA3-210ENST00000588770 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
LAMA3-210ENST00000588770 CSRNP3Q8WYN3 585 aa11.71□□□□□ -0.53
LAMA3-210ENST00000588770 RANGAP1P46060 587 aaPredicted RBP11.6□□□□□ -0.55
LAMA3-210ENST00000588770 TRIM26Q12899 539 aaPredicted RBP11.59□□□□□ -0.55
LAMA3-210ENST00000588770 ANO8Q9HCE9 1232 aaPredicted RBP11.54□□□□□ -0.56
LAMA3-210ENST00000588770 DIEXFQ68CQ4 756 aaKnown RBP11.53□□□□□ -0.56
LAMA3-210ENST00000588770 PODXL2Q9NZ53 605 aa11.52□□□□□ -0.56
LAMA3-210ENST00000588770 SHROOM4Q9ULL8 1493 aa11.5□□□□□ -0.57
LAMA3-210ENST00000588770 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
LAMA3-210ENST00000588770 EHMT2Q96KQ7 1210 aa11.49□□□□□ -0.57
LAMA3-210ENST00000588770 UBE2Q2Q8WVN8 375 aa11.47□□□□□ -0.57
LAMA3-210ENST00000588770 DCAF8L2P0C7V8 631 aa11.45□□□□□ -0.58
LAMA3-210ENST00000588770 PKNOX2Q96KN3 472 aa11.45□□□□□ -0.58
LAMA3-210ENST00000588770 GLIPR1L2Q4G1C9 344 aa11.42□□□□□ -0.58
LAMA3-210ENST00000588770 CCDC136Q96JN2 1154 aa11.41□□□□□ -0.58
LAMA3-210ENST00000588770 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
LAMA3-210ENST00000588770 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
LAMA3-210ENST00000588770 NEFLP07196 543 aa11.35□□□□□ -0.59
LAMA3-210ENST00000588770 ERICH6BQ5W0A0 696 aa11.33□□□□□ -0.6
LAMA3-210ENST00000588770 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
LAMA3-210ENST00000588770 SALL2Q9Y467 1007 aaPredicted RBP11.29□□□□□ -0.6
LAMA3-210ENST00000588770 TSHZ2Q9NRE2 1034 aa11.29□□□□□ -0.6
LAMA3-210ENST00000588770 DEKP35659 375 aaKnown RBP11.26□□□□□ -0.61
LAMA3-210ENST00000588770 RTL5Q5HYW3 569 aaPredicted RBP11.26□□□□□ -0.61
LAMA3-210ENST00000588770 NISCHQ9Y2I1 1504 aa11.2□□□□□ -0.62
LAMA3-210ENST00000588770 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
LAMA3-210ENST00000588770 BCANQ96GW7 911 aa11.16□□□□□ -0.62
LAMA3-210ENST00000588770 SUPT16HQ9Y5B9 1047 aaKnown RBP11.16□□□□□ -0.62
LAMA3-210ENST00000588770 DCAF1Q9Y4B6 1507 aa11.14□□□□□ -0.63
LAMA3-210ENST00000588770 LOC105371045A0A1W2PR82 267 aa11.13□□□□□ -0.63
LAMA3-210ENST00000588770 A0A0U1RQG5 324 aaPredicted RBP11.09□□□□□ -0.63
LAMA3-210ENST00000588770 PDE4CQ08493 712 aa11.08□□□□□ -0.64
LAMA3-210ENST00000588770 RBM19Q9Y4C8 960 aaKnown RBP11.07□□□□□ -0.64
LAMA3-210ENST00000588770 NBR1Q14596 966 aa11.05□□□□□ -0.64
LAMA3-210ENST00000588770 CCDC180Q9P1Z9 1646 aa11.05□□□□□ -0.64
LAMA3-210ENST00000588770 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
LAMA3-210ENST00000588770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.04□□□□□ -0.64
LAMA3-210ENST00000588770 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
LAMA3-210ENST00000588770 CHIC1Q5VXU3 224 aa11.04□□□□□ -0.64
LAMA3-210ENST00000588770 CDK11AQ9UQ88 783 aaPredicted RBP11□□□□□ -0.65
LAMA3-210ENST00000588770 PDIA4P13667 645 aaKnown RBP10.98□□□□□ -0.65
LAMA3-210ENST00000588770 MYO15BQ96JP2 1530 aa10.98□□□□□ -0.65
LAMA3-210ENST00000588770 MIER1Q8N108 512 aa10.96□□□□□ -0.66
LAMA3-210ENST00000588770 FKBP8Q14318 412 aa10.95□□□□□ -0.66
LAMA3-210ENST00000588770 ZMYND15Q9H091 742 aa10.89□□□□□ -0.67
LAMA3-210ENST00000588770 TIMELESSQ9UNS1 1208 aa10.89□□□□□ -0.67
LAMA3-210ENST00000588770 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
LAMA3-210ENST00000588770 RSPH6AQ9H0K4 717 aa10.87□□□□□ -0.67
LAMA3-210ENST00000588770 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
LAMA3-210ENST00000588770 ITGAEP38570 1179 aa10.83□□□□□ -0.68
LAMA3-210ENST00000588770 NCBP3Q53F19 620 aaKnown RBP10.82□□□□□ -0.68
LAMA3-210ENST00000588770 FANCIQ9NVI1 1328 aa10.81□□□□□ -0.68
LAMA3-210ENST00000588770 KLHL34Q8N239 644 aa10.8□□□□□ -0.68
LAMA3-210ENST00000588770 NOP58Q9Y2X3 529 aaKnown RBP10.8□□□□□ -0.68
LAMA3-210ENST00000588770 POLR3GLQ9BT43 218 aa10.8□□□□□ -0.68
LAMA3-210ENST00000588770 BCL11BQ9C0K0 894 aaPredicted RBP10.79□□□□□ -0.68
LAMA3-210ENST00000588770 ANP32AP39687 249 aaKnown RBP10.78□□□□□ -0.68
LAMA3-210ENST00000588770 MSH5O43196 834 aa10.77□□□□□ -0.69
LAMA3-210ENST00000588770 FGD1P98174 961 aa10.77□□□□□ -0.69
LAMA3-210ENST00000588770 ZNF326Q5BKZ1 582 aaKnown RBP10.77□□□□□ -0.69
LAMA3-210ENST00000588770 RBM10P98175 930 aaKnown RBP10.77□□□□□ -0.69
LAMA3-210ENST00000588770 TAF7LQ5H9L4 462 aa10.77□□□□□ -0.69
LAMA3-210ENST00000588770 NEFMP07197 916 aa10.76□□□□□ -0.69
LAMA3-210ENST00000588770 HSP90AA2PQ14568 343 aaPredicted RBP10.75□□□□□ -0.69
LAMA3-210ENST00000588770 ARXQ96QS3 562 aa10.74□□□□□ -0.69
LAMA3-210ENST00000588770 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
LAMA3-210ENST00000588770 HSP90AA1P07900 732 aaKnown RBP10.69□□□□□ -0.7
LAMA3-210ENST00000588770 NAP1L5Q96NT1 182 aaPredicted RBP10.69□□□□□ -0.7
LAMA3-210ENST00000588770 HNRNPUL2Q1KMD3 747 aaKnown RBP10.68□□□□□ -0.7
LAMA3-210ENST00000588770 AAMPQ13685 434 aa10.66□□□□□ -0.7
LAMA3-210ENST00000588770 NCLP19338 710 aaKnown RBP10.63□□□□□ -0.71
LAMA3-210ENST00000588770 AEBP2Q6ZN18 517 aaPredicted RBP10.62□□□□□ -0.71
LAMA3-210ENST00000588770 PAXIP1Q6ZW49 1069 aaPredicted RBP10.61□□□□□ -0.71
LAMA3-210ENST00000588770 CNGB1Q14028 1251 aaPredicted RBP10.6□□□□□ -0.71
LAMA3-210ENST00000588770 HAP1P54257 671 aaPredicted RBP10.57□□□□□ -0.72
LAMA3-210ENST00000588770 RRP9O43818 475 aaKnown RBP10.56□□□□□ -0.72
LAMA3-210ENST00000588770 CANXP27824 592 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms