RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 SPON1Q9HCB6 807 aa10.63□□□□□ -0.71
APOC1-202ENST00000588750 COL5A3P25940 1745 aaPredicted RBP10.63□□□□□ -0.71
APOC1-202ENST00000588750 ERBB4Q15303 1308 aa10.62□□□□□ -0.71
APOC1-202ENST00000588750 TJP1Q07157 1748 aa10.62□□□□□ -0.71
APOC1-202ENST00000588750 CYP19A1P11511 503 aaPredicted RBP10.62□□□□□ -0.71
APOC1-202ENST00000588750 EIF4A1P60842 406 aaKnown RBP10.62□□□□□ -0.71
APOC1-202ENST00000588750 SLC4A9Q96Q91 983 aa10.62□□□□□ -0.71
APOC1-202ENST00000588750 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.61□□□□□ -0.71
APOC1-202ENST00000588750 GIGYF1O75420 1035 aaPredicted RBP10.61□□□□□ -0.71
APOC1-202ENST00000588750 PHF14O94880 888 aa10.61□□□□□ -0.71
APOC1-202ENST00000588750 POLD1P28340 1107 aa10.61□□□□□ -0.71
APOC1-202ENST00000588750 IL6STP40189 918 aaPredicted RBP10.61□□□□□ -0.71
APOC1-202ENST00000588750 PIAS4Q8N2W9 510 aaPredicted RBP10.61□□□□□ -0.71
APOC1-202ENST00000588750 MIS18AQ9NYP9 233 aa10.61□□□□□ -0.71
APOC1-202ENST00000588750 PNPLA7Q6ZV29 1317 aa10.6□□□□□ -0.71
APOC1-202ENST00000588750 LAMB4A4D0S4 1761 aa10.6□□□□□ -0.71
APOC1-202ENST00000588750 KCNQ3O43525 872 aa10.6□□□□□ -0.71
APOC1-202ENST00000588750 ZPR1O75312 459 aa10.6□□□□□ -0.71
APOC1-202ENST00000588750 ZNF853P0CG23 659 aa10.6□□□□□ -0.71
APOC1-202ENST00000588750 UBR3Q6ZT12 1888 aa10.59□□□□□ -0.71
APOC1-202ENST00000588750 CANXP27824 592 aaKnown RBP10.59□□□□□ -0.71
APOC1-202ENST00000588750 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
APOC1-202ENST00000588750 INTS5Q6P9B9 1019 aaKnown RBP10.59□□□□□ -0.71
APOC1-202ENST00000588750 COL23A1Q86Y22 540 aaPredicted RBP10.59□□□□□ -0.71
APOC1-202ENST00000588750 NLGN1Q8N2Q7 840 aa10.59□□□□□ -0.71
APOC1-202ENST00000588750 MBIPQ9NS73 344 aa10.59□□□□□ -0.71
APOC1-202ENST00000588750 PPP1R1BQ9UD71 204 aaPredicted RBP10.59□□□□□ -0.71
APOC1-202ENST00000588750 SALL2Q9Y467 1007 aaPredicted RBP10.59□□□□□ -0.71
APOC1-202ENST00000588750 COL15A1P39059 1388 aa10.59□□□□□ -0.71
APOC1-202ENST00000588750 CASZ1Q86V15 1759 aa10.59□□□□□ -0.71
APOC1-202ENST00000588750 RGL2O15211 777 aa10.58□□□□□ -0.72
APOC1-202ENST00000588750 ARHGEF1Q92888 912 aaKnown RBP10.58□□□□□ -0.72
APOC1-202ENST00000588750 ZNF652Q9Y2D9 606 aa10.58□□□□□ -0.72
APOC1-202ENST00000588750 ZBTB1Q9Y2K1 713 aa10.58□□□□□ -0.72
APOC1-202ENST00000588750 USP16Q9Y5T5 823 aa10.58□□□□□ -0.72
APOC1-202ENST00000588750 TUBGCP6Q96RT7 1819 aa10.58□□□□□ -0.72
APOC1-202ENST00000588750 E9PSI1 815 aa10.57□□□□□ -0.72
APOC1-202ENST00000588750 ZBTB7AO95365 584 aa10.57□□□□□ -0.72
APOC1-202ENST00000588750 EIF2S2P20042 333 aaKnown RBP10.57□□□□□ -0.72
APOC1-202ENST00000588750 HDGFL1Q5TGJ6 251 aa10.57□□□□□ -0.72
APOC1-202ENST00000588750 KIF6Q6ZMV9 814 aa10.57□□□□□ -0.72
APOC1-202ENST00000588750 DBF4Q9UBU7 674 aaPredicted RBP10.57□□□□□ -0.72
APOC1-202ENST00000588750 NARFQ9UHQ1 456 aa10.57□□□□□ -0.72
APOC1-202ENST00000588750 ZNF330Q9Y3S2 320 aaPredicted RBP10.57□□□□□ -0.72
APOC1-202ENST00000588750 LRP5O75197 1615 aa10.57□□□□□ -0.72
APOC1-202ENST00000588750 A1BGP04217 495 aa10.56□□□□□ -0.72
APOC1-202ENST00000588750 EIF5P55010 431 aaKnown RBP10.56□□□□□ -0.72
APOC1-202ENST00000588750 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
APOC1-202ENST00000588750 DUSP27Q5VZP5 1158 aa10.56□□□□□ -0.72
APOC1-202ENST00000588750 ARXQ96QS3 562 aa10.56□□□□□ -0.72
APOC1-202ENST00000588750 STK31Q9BXU1 1019 aa10.56□□□□□ -0.72
APOC1-202ENST00000588750 USP42Q9H9J4 1324 aaKnown RBP10.56□□□□□ -0.72
APOC1-202ENST00000588750 MYH14Q7Z406 1995 aaKnown RBP10.56□□□□□ -0.72
APOC1-202ENST00000588750 CLEC4GQ6UXB4 293 aa10.55□□□□□ -0.72
APOC1-202ENST00000588750 DZIP3Q86Y13 1208 aaKnown RBP10.55□□□□□ -0.72
APOC1-202ENST00000588750 ZNF428Q96B54 188 aa10.55□□□□□ -0.72
APOC1-202ENST00000588750 DDX21Q9NR30 783 aaKnown RBP eCLIP10.55□□□□□ -0.72
APOC1-202ENST00000588750 HYPKQ9NX55 129 aa10.55□□□□□ -0.72
APOC1-202ENST00000588750 ATF5Q9Y2D1 282 aaPredicted RBP10.55□□□□□ -0.72
APOC1-202ENST00000588750 HNRNPUQ00839 825 aaKnown RBP eCLIP10.54□□□□□ -0.72
APOC1-202ENST00000588750 TWISTNBQ3B726 338 aaPredicted RBP10.54□□□□□ -0.72
APOC1-202ENST00000588750 PARP3Q9Y6F1 533 aa10.54□□□□□ -0.72
APOC1-202ENST00000588750 ZNF521Q96K83 1311 aa10.54□□□□□ -0.72
APOC1-202ENST00000588750 FANCIQ9NVI1 1328 aa10.54□□□□□ -0.72
APOC1-202ENST00000588750 C4AP0C0L4 1744 aa10.53□□□□□ -0.72
APOC1-202ENST00000588750 PRAMEF22A3QJZ6 481 aa10.53□□□□□ -0.72
APOC1-202ENST00000588750 DCAF8L1A6NGE4 600 aa10.53□□□□□ -0.72
APOC1-202ENST00000588750 ERVV-1B6SEH8 477 aa10.53□□□□□ -0.72
APOC1-202ENST00000588750 CT47B1P0C2W7 299 aaPredicted RBP10.53□□□□□ -0.72
APOC1-202ENST00000588750 GYS1P13807 737 aa10.53□□□□□ -0.72
APOC1-202ENST00000588750 MYL6BP14649 208 aa10.53□□□□□ -0.72
APOC1-202ENST00000588750 USPL1Q5W0Q7 1092 aa10.53□□□□□ -0.72
APOC1-202ENST00000588750 TSR2Q969E8 191 aaKnown RBP10.53□□□□□ -0.72
APOC1-202ENST00000588750 NPHP1O15259 732 aa10.52□□□□□ -0.73
APOC1-202ENST00000588750 DDX58O95786 925 aaKnown RBP10.52□□□□□ -0.73
APOC1-202ENST00000588750 HSP90AB3PQ58FF7 597 aa10.52□□□□□ -0.73
APOC1-202ENST00000588750 PDGFDQ9GZP0 370 aaPredicted RBP10.52□□□□□ -0.73
APOC1-202ENST00000588750 TBC1D2BQ9UPU7 963 aa10.52□□□□□ -0.73
APOC1-202ENST00000588750 COL24A1Q17RW2 1714 aa10.52□□□□□ -0.73
APOC1-202ENST00000588750 SENP3-EIF4A1A0A087X0R7 540 aa10.51□□□□□ -0.73
APOC1-202ENST00000588750 ELL2O00472 640 aaPredicted RBP10.51□□□□□ -0.73
APOC1-202ENST00000588750 MMP10P09238 476 aa10.51□□□□□ -0.73
APOC1-202ENST00000588750 PTGER2P43116 358 aa10.51□□□□□ -0.73
APOC1-202ENST00000588750 SLFN5Q08AF3 891 aa10.51□□□□□ -0.73
APOC1-202ENST00000588750 MSL1Q68DK7 614 aa10.51□□□□□ -0.73
APOC1-202ENST00000588750 C8orf58Q8NAV2 365 aa10.51□□□□□ -0.73
APOC1-202ENST00000588750 SETDB2Q96T68 719 aa10.51□□□□□ -0.73
APOC1-202ENST00000588750 MAP3K15Q6ZN16 1313 aa10.51□□□□□ -0.73
APOC1-202ENST00000588750 NBPF26B4DH59 902 aa10.5□□□□□ -0.73
APOC1-202ENST00000588750 EXOSC9Q06265 439 aaKnown RBP10.5□□□□□ -0.73
APOC1-202ENST00000588750 NBPF10Q6P3W6 841 aaKnown RBP10.5□□□□□ -0.73
APOC1-202ENST00000588750 AMIGO3Q86WK7 504 aa10.5□□□□□ -0.73
APOC1-202ENST00000588750 NBPF15Q8N660 670 aa10.5□□□□□ -0.73
APOC1-202ENST00000588750 NECTIN2Q92692 538 aa10.5□□□□□ -0.73
APOC1-202ENST00000588750 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
APOC1-202ENST00000588750 CHPF2Q9P2E5 772 aa10.5□□□□□ -0.73
APOC1-202ENST00000588750 PDZRN3Q9UPQ7 1066 aa10.5□□□□□ -0.73
APOC1-202ENST00000588750 ZBED9Q6R2W3 1325 aa10.5□□□□□ -0.73
APOC1-202ENST00000588750 CACNA1FO60840 1977 aa10.5□□□□□ -0.73
APOC1-202ENST00000588750 SCN7AQ01118 1682 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms