RNA–Protein interactions for RNA: ENST00000585843.1

DNMT1-204, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 911 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-204ENST00000585843 TSPYL4Q9UJ04 414 aa18.31■□□□□ 0.52
DNMT1-204ENST00000585843 RFC4P35249 363 aa18.3■□□□□ 0.52
DNMT1-204ENST00000585843 ARHGEF1Q92888 912 aaKnown RBP18.3■□□□□ 0.52
DNMT1-204ENST00000585843 MSL1Q68DK7 614 aa18.29■□□□□ 0.52
DNMT1-204ENST00000585843 FAM9BQ8IZU0 186 aa18.29■□□□□ 0.52
DNMT1-204ENST00000585843 SGIP1Q9BQI5 828 aa18.29■□□□□ 0.52
DNMT1-204ENST00000585843 MYH14Q7Z406 1995 aaKnown RBP18.28■□□□□ 0.52
DNMT1-204ENST00000585843 CANXP27824 592 aaKnown RBP18.28■□□□□ 0.52
DNMT1-204ENST00000585843 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
DNMT1-204ENST00000585843 DIEXFQ68CQ4 756 aaKnown RBP18.28■□□□□ 0.52
DNMT1-204ENST00000585843 ZBTB1Q9Y2K1 713 aa18.28■□□□□ 0.52
DNMT1-204ENST00000585843 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
DNMT1-204ENST00000585843 SOS1Q07889 1333 aaPredicted RBP18.27■□□□□ 0.52
DNMT1-204ENST00000585843 CALD1Q05682 793 aaKnown RBP18.27■□□□□ 0.52
DNMT1-204ENST00000585843 ARXQ96QS3 562 aa18.27■□□□□ 0.52
DNMT1-204ENST00000585843 USP16Q9Y5T5 823 aa18.27■□□□□ 0.52
DNMT1-204ENST00000585843 PRAMEF22A3QJZ6 481 aa18.26■□□□□ 0.51
DNMT1-204ENST00000585843 CHL1O00533 1208 aa18.26■□□□□ 0.51
DNMT1-204ENST00000585843 KDM3BQ7LBC6 1761 aa18.25■□□□□ 0.51
DNMT1-204ENST00000585843 CCER2I3L3R5 266 aa18.25■□□□□ 0.51
DNMT1-204ENST00000585843 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
DNMT1-204ENST00000585843 A1BGP04217 495 aa18.25■□□□□ 0.51
DNMT1-204ENST00000585843 A0A087WZG4 1122 aa18.24■□□□□ 0.51
DNMT1-204ENST00000585843 ZPR1O75312 459 aa18.24■□□□□ 0.51
DNMT1-204ENST00000585843 EIF5P55010 431 aaKnown RBP18.24■□□□□ 0.51
DNMT1-204ENST00000585843 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
DNMT1-204ENST00000585843 NLGN1Q8N2Q7 840 aa18.24■□□□□ 0.51
DNMT1-204ENST00000585843 CFAP44Q96MT7 982 aa18.24■□□□□ 0.51
DNMT1-204ENST00000585843 COL15A1P39059 1388 aa18.23■□□□□ 0.51
DNMT1-204ENST00000585843 SENP3-EIF4A1A0A087X0R7 540 aa18.23■□□□□ 0.51
DNMT1-204ENST00000585843 GYS1P13807 737 aa18.23■□□□□ 0.51
DNMT1-204ENST00000585843 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
DNMT1-204ENST00000585843 CCDC27Q2M243 656 aa18.23■□□□□ 0.51
DNMT1-204ENST00000585843 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
DNMT1-204ENST00000585843 SRP68Q9UHB9 627 aaKnown RBP18.23■□□□□ 0.51
DNMT1-204ENST00000585843 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
DNMT1-204ENST00000585843 IFT57Q9NWB7 429 aa18.22■□□□□ 0.51
DNMT1-204ENST00000585843 ZNF330Q9Y3S2 320 aaPredicted RBP18.22■□□□□ 0.51
DNMT1-204ENST00000585843 COL24A1Q17RW2 1714 aa18.22■□□□□ 0.51
DNMT1-204ENST00000585843 GNAI1P63096 354 aa18.21■□□□□ 0.51
DNMT1-204ENST00000585843 NARFQ9UHQ1 456 aa18.21■□□□□ 0.51
DNMT1-204ENST00000585843 ZNF853P0CG23 659 aa18.2■□□□□ 0.5
DNMT1-204ENST00000585843 USPL1Q5W0Q7 1092 aa18.2■□□□□ 0.5
DNMT1-204ENST00000585843 WWC1Q8IX03 1113 aa18.2■□□□□ 0.5
DNMT1-204ENST00000585843 FHDC1Q9C0D6 1143 aaPredicted RBP18.2■□□□□ 0.5
DNMT1-204ENST00000585843 MMP10P09238 476 aa18.19■□□□□ 0.5
DNMT1-204ENST00000585843 PIP4K2AP48426 406 aaPredicted RBP18.19■□□□□ 0.5
DNMT1-204ENST00000585843 KLHL34Q8N239 644 aa18.19■□□□□ 0.5
DNMT1-204ENST00000585843 MBIPQ9NS73 344 aa18.19■□□□□ 0.5
DNMT1-204ENST00000585843 SALL2Q9Y467 1007 aaPredicted RBP18.19■□□□□ 0.5
DNMT1-204ENST00000585843 C4AP0C0L4 1744 aa18.18■□□□□ 0.5
DNMT1-204ENST00000585843 NBPF26B4DH59 902 aa18.18■□□□□ 0.5
DNMT1-204ENST00000585843 FKBP8Q14318 412 aa18.18■□□□□ 0.5
DNMT1-204ENST00000585843 NBPF10Q6P3W6 841 aaKnown RBP18.18■□□□□ 0.5
DNMT1-204ENST00000585843 NGEFQ8N5V2 710 aa18.18■□□□□ 0.5
DNMT1-204ENST00000585843 NBPF15Q8N660 670 aa18.18■□□□□ 0.5
DNMT1-204ENST00000585843 EIF2S2P20042 333 aaKnown RBP18.17■□□□□ 0.5
DNMT1-204ENST00000585843 MIER1Q8N108 512 aa18.17■□□□□ 0.5
DNMT1-204ENST00000585843 SYT17Q9BSW7 474 aa18.17■□□□□ 0.5
DNMT1-204ENST00000585843 TBC1D2BQ9UPU7 963 aa18.17■□□□□ 0.5
DNMT1-204ENST00000585843 DZIP3Q86Y13 1208 aaKnown RBP18.16■□□□□ 0.5
DNMT1-204ENST00000585843 PARP3Q9Y6F1 533 aa18.16■□□□□ 0.5
DNMT1-204ENST00000585843 ERBB4Q15303 1308 aa18.16■□□□□ 0.5
DNMT1-204ENST00000585843 LAMB4A4D0S4 1761 aa18.15■□□□□ 0.5
DNMT1-204ENST00000585843 KRT24Q2M2I5 525 aa18.15■□□□□ 0.5
DNMT1-204ENST00000585843 WDR63Q8IWG1 891 aa18.15■□□□□ 0.5
DNMT1-204ENST00000585843 IL16Q14005 1332 aa18.15■□□□□ 0.5
DNMT1-204ENST00000585843 HOXB7P09629 217 aa18.14■□□□□ 0.49
DNMT1-204ENST00000585843 MYL6BP14649 208 aa18.14■□□□□ 0.49
DNMT1-204ENST00000585843 TM4SF1P30408 202 aa18.14■□□□□ 0.49
DNMT1-204ENST00000585843 BCL2L12Q9HB09 334 aa18.14■□□□□ 0.49
DNMT1-204ENST00000585843 CD2APQ9Y5K6 639 aa18.14■□□□□ 0.49
DNMT1-204ENST00000585843 CAMTA2O94983 1202 aa18.13■□□□□ 0.49
DNMT1-204ENST00000585843 DUSP27Q5VZP5 1158 aa18.13■□□□□ 0.49
DNMT1-204ENST00000585843 NECTIN2Q92692 538 aa18.12■□□□□ 0.49
DNMT1-204ENST00000585843 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
DNMT1-204ENST00000585843 DDR1Q08345 913 aa18.11■□□□□ 0.49
DNMT1-204ENST00000585843 NFIXQ14938 502 aa18.11■□□□□ 0.49
DNMT1-204ENST00000585843 HDGFL1Q5TGJ6 251 aa18.11■□□□□ 0.49
DNMT1-204ENST00000585843 TSR2Q969E8 191 aaKnown RBP18.11■□□□□ 0.49
DNMT1-204ENST00000585843 ZNF652Q9Y2D9 606 aa18.11■□□□□ 0.49
DNMT1-204ENST00000585843 POLRMTO00411 1230 aaKnown RBP18.1■□□□□ 0.49
DNMT1-204ENST00000585843 PDIA6Q15084 440 aa18.1■□□□□ 0.49
DNMT1-204ENST00000585843 CLEC4GQ6UXB4 293 aa18.1■□□□□ 0.49
DNMT1-204ENST00000585843 KIF6Q6ZMV9 814 aa18.1■□□□□ 0.49
DNMT1-204ENST00000585843 BICDL1Q6ZP65 573 aa18.1■□□□□ 0.49
DNMT1-204ENST00000585843 ELL2O00472 640 aaPredicted RBP18.09■□□□□ 0.49
DNMT1-204ENST00000585843 RGL2O15211 777 aa18.09■□□□□ 0.49
DNMT1-204ENST00000585843 TBC1D9BQ66K14 1250 aa18.09■□□□□ 0.49
DNMT1-204ENST00000585843 C8orf58Q8NAV2 365 aa18.09■□□□□ 0.49
DNMT1-204ENST00000585843 NLGN2Q8NFZ4 835 aa18.09■□□□□ 0.49
DNMT1-204ENST00000585843 CHMP4AQ9BY43 222 aa18.09■□□□□ 0.49
DNMT1-204ENST00000585843 DDX21Q9NR30 783 aaKnown RBP eCLIP18.09■□□□□ 0.49
DNMT1-204ENST00000585843 PROSER3Q2NL68 480 aa18.08■□□□□ 0.48
DNMT1-204ENST00000585843 TTLL7Q6ZT98 887 aa18.08■□□□□ 0.48
DNMT1-204ENST00000585843 SETDB2Q96T68 719 aa18.08■□□□□ 0.48
DNMT1-204ENST00000585843 SCN7AQ01118 1682 aa18.07■□□□□ 0.48
DNMT1-204ENST00000585843 ERVV-1B6SEH8 477 aa18.07■□□□□ 0.48
DNMT1-204ENST00000585843 ANXA1P04083 346 aa18.07■□□□□ 0.48
DNMT1-204ENST00000585843 SERPINB2P05120 415 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms