RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 PHF14O94880 888 aa21.47■■□□□ 1.03
RNF43-206ENST00000582293 SSFA2P28290 1259 aa21.47■■□□□ 1.03
RNF43-206ENST00000582293 CCDC87Q9NVE4 849 aa21.47■■□□□ 1.03
RNF43-206ENST00000582293 ZBTB1Q9Y2K1 713 aa21.47■■□□□ 1.03
RNF43-206ENST00000582293 LAS1LQ9Y4W2 734 aaKnown RBP21.47■■□□□ 1.03
RNF43-206ENST00000582293 C4AP0C0L4 1744 aa21.46■■□□□ 1.03
RNF43-206ENST00000582293 SNRPA1P09661 255 aaKnown RBP21.46■■□□□ 1.03
RNF43-206ENST00000582293 KRT24Q2M2I5 525 aa21.46■■□□□ 1.03
RNF43-206ENST00000582293 MBIPQ9NS73 344 aa21.46■■□□□ 1.03
RNF43-206ENST00000582293 IFT57Q9NWB7 429 aa21.46■■□□□ 1.03
RNF43-206ENST00000582293 LRP5O75197 1615 aa21.45■■□□□ 1.02
RNF43-206ENST00000582293 ZBTB7AO95365 584 aa21.45■■□□□ 1.02
RNF43-206ENST00000582293 TEX13AQ9BXU3 409 aaPredicted RBP21.45■■□□□ 1.02
RNF43-206ENST00000582293 SOS1Q07889 1333 aaPredicted RBP21.45■■□□□ 1.02
RNF43-206ENST00000582293 ZNF521Q96K83 1311 aa21.45■■□□□ 1.02
RNF43-206ENST00000582293 A1BGP04217 495 aa21.44■■□□□ 1.02
RNF43-206ENST00000582293 RTCBQ9Y3I0 505 aaKnown RBP21.44■■□□□ 1.02
RNF43-206ENST00000582293 STARD3NLO95772 234 aa21.43■■□□□ 1.02
RNF43-206ENST00000582293 ARHGEF1Q92888 912 aaKnown RBP21.43■■□□□ 1.02
RNF43-206ENST00000582293 FLAD1Q8NFF5 587 aa21.42■■□□□ 1.02
RNF43-206ENST00000582293 SGIP1Q9BQI5 828 aa21.42■■□□□ 1.02
RNF43-206ENST00000582293 SPINK5Q9NQ38 1064 aaPredicted RBP21.42■■□□□ 1.02
RNF43-206ENST00000582293 IL16Q14005 1332 aa21.41■■□□□ 1.02
RNF43-206ENST00000582293 NBPF26B4DH59 902 aa21.41■■□□□ 1.02
RNF43-206ENST00000582293 ADRA2BP18089 450 aa21.41■■□□□ 1.02
RNF43-206ENST00000582293 PTGER2P43116 358 aa21.41■■□□□ 1.02
RNF43-206ENST00000582293 PIP4K2AP48426 406 aaPredicted RBP21.41■■□□□ 1.02
RNF43-206ENST00000582293 EIF5P55010 431 aaKnown RBP21.41■■□□□ 1.02
RNF43-206ENST00000582293 GNAI1P63096 354 aa21.41■■□□□ 1.02
RNF43-206ENST00000582293 CALD1Q05682 793 aaKnown RBP21.41■■□□□ 1.02
RNF43-206ENST00000582293 NBPF10Q6P3W6 841 aaKnown RBP21.41■■□□□ 1.02
RNF43-206ENST00000582293 NBPF15Q8N660 670 aa21.41■■□□□ 1.02
RNF43-206ENST00000582293 MTFR1LQ9H019 292 aa21.41■■□□□ 1.02
RNF43-206ENST00000582293 ATF5Q9Y2D1 282 aaPredicted RBP21.41■■□□□ 1.02
RNF43-206ENST00000582293 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
RNF43-206ENST00000582293 TRAPPC3LQ5T215 181 aa21.4■■□□□ 1.02
RNF43-206ENST00000582293 WDR63Q8IWG1 891 aa21.4■■□□□ 1.02
RNF43-206ENST00000582293 NGEFQ8N5V2 710 aa21.4■■□□□ 1.02
RNF43-206ENST00000582293 SLC16A10Q8TF71 515 aa21.4■■□□□ 1.02
RNF43-206ENST00000582293 COL15A1P39059 1388 aa21.39■■□□□ 1.02
RNF43-206ENST00000582293 MSH5O43196 834 aa21.39■■□□□ 1.01
RNF43-206ENST00000582293 TSR2Q969E8 191 aaKnown RBP21.39■■□□□ 1.01
RNF43-206ENST00000582293 SRCAPQ6ZRS2 3230 aa21.38■■□□□ 1.01
RNF43-206ENST00000582293 SRP68Q9UHB9 627 aaKnown RBP21.38■■□□□ 1.01
RNF43-206ENST00000582293 MSL1Q68DK7 614 aa21.37■■□□□ 1.01
RNF43-206ENST00000582293 SPON1Q9HCB6 807 aa21.37■■□□□ 1.01
RNF43-206ENST00000582293 USP42Q9H9J4 1324 aaKnown RBP21.36■■□□□ 1.01
RNF43-206ENST00000582293 IL6STP40189 918 aaPredicted RBP21.36■■□□□ 1.01
RNF43-206ENST00000582293 GYS1P13807 737 aa21.35■■□□□ 1.01
RNF43-206ENST00000582293 PDIA6Q15084 440 aa21.35■■□□□ 1.01
RNF43-206ENST00000582293 LRP10Q7Z4F1 713 aa21.35■■□□□ 1.01
RNF43-206ENST00000582293 C8orf58Q8NAV2 365 aa21.35■■□□□ 1.01
RNF43-206ENST00000582293 FANCIQ9NVI1 1328 aa21.34■■□□□ 1.01
RNF43-206ENST00000582293 RFC4P35249 363 aa21.34■■□□□ 1.01
RNF43-206ENST00000582293 TSPYL6Q8N831 410 aa21.34■■□□□ 1.01
RNF43-206ENST00000582293 BCL2L12Q9HB09 334 aa21.34■■□□□ 1.01
RNF43-206ENST00000582293 SCN7AQ01118 1682 aa21.34■■□□□ 1.01
RNF43-206ENST00000582293 PROSER3Q2NL68 480 aa21.33■■□□□ 1.01
RNF43-206ENST00000582293 DUSP27Q5VZP5 1158 aa21.33■■□□□ 1.01
RNF43-206ENST00000582293 NARFQ9UHQ1 456 aa21.33■■□□□ 1.01
RNF43-206ENST00000582293 BCORQ6W2J9 1755 aa21.33■■□□□ 1
RNF43-206ENST00000582293 HOXB7P09629 217 aa21.32■■□□□ 1
RNF43-206ENST00000582293 EIF2S2P20042 333 aaKnown RBP21.32■■□□□ 1
RNF43-206ENST00000582293 USPL1Q5W0Q7 1092 aa21.32■■□□□ 1
RNF43-206ENST00000582293 ELL2O00472 640 aaPredicted RBP21.31■■□□□ 1
RNF43-206ENST00000582293 FKBP8Q14318 412 aa21.31■■□□□ 1
RNF43-206ENST00000582293 NECTIN2Q92692 538 aa21.31■■□□□ 1
RNF43-206ENST00000582293 ERBB4Q15303 1308 aa21.3■■□□□ 1
RNF43-206ENST00000582293 ANXA1P04083 346 aa21.3■■□□□ 1
RNF43-206ENST00000582293 TBC1D2BQ9UPU7 963 aa21.3■■□□□ 1
RNF43-206ENST00000582293 ZNF330Q9Y3S2 320 aaPredicted RBP21.3■■□□□ 1
RNF43-206ENST00000582293 CAMTA2O94983 1202 aa21.29■■□□□ 1
RNF43-206ENST00000582293 A0A087WZG4 1122 aa21.28■■□□□ 1
RNF43-206ENST00000582293 MYL6BP14649 208 aa21.28■■□□□ 1
RNF43-206ENST00000582293 HDGFL1Q5TGJ6 251 aa21.28■■□□□ 1
RNF43-206ENST00000582293 CDCA7LQ96GN5 454 aa21.28■■□□□ 1
RNF43-206ENST00000582293 GOLGA2Q08379 1002 aa21.27■■□□□ 1
RNF43-206ENST00000582293 DZIP3Q86Y13 1208 aaKnown RBP21.27■■□□□ 1
RNF43-206ENST00000582293 CHPF2Q9P2E5 772 aa21.27■■□□□ 1
RNF43-206ENST00000582293 ZPR1O75312 459 aa21.26■□□□□ 0.99
RNF43-206ENST00000582293 TM4SF1P30408 202 aa21.26■□□□□ 0.99
RNF43-206ENST00000582293 EXOSC9Q06265 439 aaKnown RBP21.26■□□□□ 0.99
RNF43-206ENST00000582293 SLFN5Q08AF3 891 aa21.26■□□□□ 0.99
RNF43-206ENST00000582293 TTLL7Q6ZT98 887 aa21.26■□□□□ 0.99
RNF43-206ENST00000582293 NLGN1Q8N2Q7 840 aa21.26■□□□□ 0.99
RNF43-206ENST00000582293 ARXQ96QS3 562 aa21.26■□□□□ 0.99
RNF43-206ENST00000582293 DDX21Q9NR30 783 aaKnown RBP eCLIP21.26■□□□□ 0.99
RNF43-206ENST00000582293 MMP10P09238 476 aa21.25■□□□□ 0.99
RNF43-206ENST00000582293 DDR1Q08345 913 aa21.25■□□□□ 0.99
RNF43-206ENST00000582293 TRMT2AQ8IZ69 625 aaKnown RBP21.25■□□□□ 0.99
RNF43-206ENST00000582293 POLD1P28340 1107 aa21.24■□□□□ 0.99
RNF43-206ENST00000582293 TWISTNBQ3B726 338 aaPredicted RBP21.24■□□□□ 0.99
RNF43-206ENST00000582293 MYH16Q9H6N6 1097 aa21.24■□□□□ 0.99
RNF43-206ENST00000582293 E9PSI1 815 aa21.23■□□□□ 0.99
RNF43-206ENST00000582293 VAMP4O75379 141 aa21.23■□□□□ 0.99
RNF43-206ENST00000582293 HNRNPUQ00839 825 aaKnown RBP eCLIP21.23■□□□□ 0.99
RNF43-206ENST00000582293 NFIXQ14938 502 aa21.23■□□□□ 0.99
RNF43-206ENST00000582293 HLFQ16534 295 aa21.22■□□□□ 0.99
RNF43-206ENST00000582293 TBC1D9BQ66K14 1250 aa21.22■□□□□ 0.99
RNF43-206ENST00000582293 NRXN2Q9P2S2 1712 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms