RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 COL23A1Q86Y22 540 aaPredicted RBP20.07■□□□□ 0.8
IFT20-208ENST00000578985 IFT57Q9NWB7 429 aa20.07■□□□□ 0.8
IFT20-208ENST00000578985 RTCBQ9Y3I0 505 aaKnown RBP20.07■□□□□ 0.8
IFT20-208ENST00000578985 MSH5O43196 834 aa20.06■□□□□ 0.8
IFT20-208ENST00000578985 PHF14O94880 888 aa20.06■□□□□ 0.8
IFT20-208ENST00000578985 ZNF853P0CG23 659 aa20.06■□□□□ 0.8
IFT20-208ENST00000578985 SSFA2P28290 1259 aa20.06■□□□□ 0.8
IFT20-208ENST00000578985 GNAI1P63096 354 aa20.06■□□□□ 0.8
IFT20-208ENST00000578985 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
IFT20-208ENST00000578985 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.05■□□□□ 0.8
IFT20-208ENST00000578985 PRAMEF22A3QJZ6 481 aa20.05■□□□□ 0.8
IFT20-208ENST00000578985 USP16Q9Y5T5 823 aa20.05■□□□□ 0.8
IFT20-208ENST00000578985 LAMB4A4D0S4 1761 aa20.04■□□□□ 0.8
IFT20-208ENST00000578985 GIGYF1O75420 1035 aaPredicted RBP20.04■□□□□ 0.8
IFT20-208ENST00000578985 IL16Q14005 1332 aa20.03■□□□□ 0.8
IFT20-208ENST00000578985 ZBTB7AO95365 584 aa20.03■□□□□ 0.8
IFT20-208ENST00000578985 A1BGP04217 495 aa20.03■□□□□ 0.8
IFT20-208ENST00000578985 ADRA2BP18089 450 aa20.03■□□□□ 0.8
IFT20-208ENST00000578985 TRAPPC3LQ5T215 181 aa20.03■□□□□ 0.8
IFT20-208ENST00000578985 WDR63Q8IWG1 891 aa20.03■□□□□ 0.8
IFT20-208ENST00000578985 MBIPQ9NS73 344 aa20.03■□□□□ 0.8
IFT20-208ENST00000578985 ZBTB1Q9Y2K1 713 aa20.03■□□□□ 0.8
IFT20-208ENST00000578985 CANXP27824 592 aaKnown RBP20.02■□□□□ 0.8
IFT20-208ENST00000578985 SLC16A10Q8TF71 515 aa20.02■□□□□ 0.8
IFT20-208ENST00000578985 SOS1Q07889 1333 aaPredicted RBP20.02■□□□□ 0.79
IFT20-208ENST00000578985 MTFR1LQ9H019 292 aa20.01■□□□□ 0.79
IFT20-208ENST00000578985 ARHGEF1Q92888 912 aaKnown RBP20■□□□□ 0.79
IFT20-208ENST00000578985 SPON1Q9HCB6 807 aa20■□□□□ 0.79
IFT20-208ENST00000578985 ATF5Q9Y2D1 282 aaPredicted RBP20■□□□□ 0.79
IFT20-208ENST00000578985 C4AP0C0L4 1744 aa19.99■□□□□ 0.79
IFT20-208ENST00000578985 RFC4P35249 363 aa19.99■□□□□ 0.79
IFT20-208ENST00000578985 KRT24Q2M2I5 525 aa19.99■□□□□ 0.79
IFT20-208ENST00000578985 PIP4K2AP48426 406 aaPredicted RBP19.97■□□□□ 0.79
IFT20-208ENST00000578985 EIF5P55010 431 aaKnown RBP19.97■□□□□ 0.79
IFT20-208ENST00000578985 TSR2Q969E8 191 aaKnown RBP19.97■□□□□ 0.79
IFT20-208ENST00000578985 LRP5O75197 1615 aa19.97■□□□□ 0.79
IFT20-208ENST00000578985 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
IFT20-208ENST00000578985 COL15A1P39059 1388 aa19.96■□□□□ 0.79
IFT20-208ENST00000578985 A0A087WZG4 1122 aa19.96■□□□□ 0.79
IFT20-208ENST00000578985 NBPF26B4DH59 902 aa19.96■□□□□ 0.79
IFT20-208ENST00000578985 EIF2S2P20042 333 aaKnown RBP19.96■□□□□ 0.79
IFT20-208ENST00000578985 IL6STP40189 918 aaPredicted RBP19.96■□□□□ 0.79
IFT20-208ENST00000578985 DUSP27Q5VZP5 1158 aa19.96■□□□□ 0.79
IFT20-208ENST00000578985 NBPF10Q6P3W6 841 aaKnown RBP19.96■□□□□ 0.79
IFT20-208ENST00000578985 NBPF15Q8N660 670 aa19.96■□□□□ 0.79
IFT20-208ENST00000578985 ZNF330Q9Y3S2 320 aaPredicted RBP19.96■□□□□ 0.79
IFT20-208ENST00000578985 COL24A1Q17RW2 1714 aa19.96■□□□□ 0.79
IFT20-208ENST00000578985 HOXB7P09629 217 aa19.95■□□□□ 0.78
IFT20-208ENST00000578985 MSL1Q68DK7 614 aa19.95■□□□□ 0.78
IFT20-208ENST00000578985 NPM2Q86SE8 214 aaKnown RBP19.95■□□□□ 0.78
IFT20-208ENST00000578985 SPINK5Q9NQ38 1064 aaPredicted RBP19.94■□□□□ 0.78
IFT20-208ENST00000578985 SRP68Q9UHB9 627 aaKnown RBP19.94■□□□□ 0.78
IFT20-208ENST00000578985 ERBB4Q15303 1308 aa19.94■□□□□ 0.78
IFT20-208ENST00000578985 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
IFT20-208ENST00000578985 ZPR1O75312 459 aa19.93■□□□□ 0.78
IFT20-208ENST00000578985 PTGER2P43116 358 aa19.93■□□□□ 0.78
IFT20-208ENST00000578985 C8orf58Q8NAV2 365 aa19.93■□□□□ 0.78
IFT20-208ENST00000578985 NECTIN2Q92692 538 aa19.93■□□□□ 0.78
IFT20-208ENST00000578985 MYH16Q9H6N6 1097 aa19.93■□□□□ 0.78
IFT20-208ENST00000578985 USP42Q9H9J4 1324 aaKnown RBP19.93■□□□□ 0.78
IFT20-208ENST00000578985 FANCIQ9NVI1 1328 aa19.93■□□□□ 0.78
IFT20-208ENST00000578985 GOLGA2Q08379 1002 aa19.92■□□□□ 0.78
IFT20-208ENST00000578985 ARXQ96QS3 562 aa19.92■□□□□ 0.78
IFT20-208ENST00000578985 NARFQ9UHQ1 456 aa19.92■□□□□ 0.78
IFT20-208ENST00000578985 GYS1P13807 737 aa19.91■□□□□ 0.78
IFT20-208ENST00000578985 POLD1P28340 1107 aa19.91■□□□□ 0.78
IFT20-208ENST00000578985 HDGFL1Q5TGJ6 251 aa19.91■□□□□ 0.78
IFT20-208ENST00000578985 SGIP1Q9BQI5 828 aa19.91■□□□□ 0.78
IFT20-208ENST00000578985 TBC1D2BQ9UPU7 963 aa19.91■□□□□ 0.78
IFT20-208ENST00000578985 MYL6BP14649 208 aa19.9■□□□□ 0.78
IFT20-208ENST00000578985 HNRNPUQ00839 825 aaKnown RBP eCLIP19.9■□□□□ 0.78
IFT20-208ENST00000578985 USPL1Q5W0Q7 1092 aa19.9■□□□□ 0.78
IFT20-208ENST00000578985 NLGN1Q8N2Q7 840 aa19.9■□□□□ 0.78
IFT20-208ENST00000578985 TSPYL6Q8N831 410 aa19.9■□□□□ 0.78
IFT20-208ENST00000578985 PDIA6Q15084 440 aa19.89■□□□□ 0.77
IFT20-208ENST00000578985 DZIP3Q86Y13 1208 aaKnown RBP19.89■□□□□ 0.77
IFT20-208ENST00000578985 E9PSI1 815 aa19.88■□□□□ 0.77
IFT20-208ENST00000578985 EXOSC9Q06265 439 aaKnown RBP19.88■□□□□ 0.77
IFT20-208ENST00000578985 FKBP8Q14318 412 aa19.88■□□□□ 0.77
IFT20-208ENST00000578985 DDX21Q9NR30 783 aaKnown RBP eCLIP19.88■□□□□ 0.77
IFT20-208ENST00000578985 PPP1R1BQ9UD71 204 aaPredicted RBP19.88■□□□□ 0.77
IFT20-208ENST00000578985 SCN7AQ01118 1682 aa19.87■□□□□ 0.77
IFT20-208ENST00000578985 ANXA1P04083 346 aa19.87■□□□□ 0.77
IFT20-208ENST00000578985 SLFN5Q08AF3 891 aa19.87■□□□□ 0.77
IFT20-208ENST00000578985 PROSER3Q2NL68 480 aa19.87■□□□□ 0.77
IFT20-208ENST00000578985 TWISTNBQ3B726 338 aaPredicted RBP19.87■□□□□ 0.77
IFT20-208ENST00000578985 CHMP4AQ9BY43 222 aa19.87■□□□□ 0.77
IFT20-208ENST00000578985 BCL2L12Q9HB09 334 aa19.87■□□□□ 0.77
IFT20-208ENST00000578985 CHPF2Q9P2E5 772 aa19.87■□□□□ 0.77
IFT20-208ENST00000578985 BCORQ6W2J9 1755 aa19.87■□□□□ 0.77
IFT20-208ENST00000578985 CAMTA2O94983 1202 aa19.86■□□□□ 0.77
IFT20-208ENST00000578985 MMP10P09238 476 aa19.86■□□□□ 0.77
IFT20-208ENST00000578985 CDCA7LQ96GN5 454 aa19.86■□□□□ 0.77
IFT20-208ENST00000578985 DBF4Q9UBU7 674 aaPredicted RBP19.86■□□□□ 0.77
IFT20-208ENST00000578985 CCDC30Q5VVM6 783 aa19.85■□□□□ 0.77
IFT20-208ENST00000578985 LRP10Q7Z4F1 713 aa19.85■□□□□ 0.77
IFT20-208ENST00000578985 KIF6Q6ZMV9 814 aa19.84■□□□□ 0.77
IFT20-208ENST00000578985 TTLL7Q6ZT98 887 aa19.84■□□□□ 0.77
IFT20-208ENST00000578985 VAMP4O75379 141 aa19.83■□□□□ 0.77
IFT20-208ENST00000578985 TM4SF1P30408 202 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms