RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CYP19A1P11511 503 aaPredicted RBP10.37□□□□□ -0.75
CCDC40-215ENST00000576033 NBPF14Q5TI25 921 aa10.37□□□□□ -0.75
CCDC40-215ENST00000576033 USP16Q9Y5T5 823 aa10.37□□□□□ -0.75
CCDC40-215ENST00000576033 CNTNAP4Q9C0A0 1308 aa10.36□□□□□ -0.75
CCDC40-215ENST00000576033 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.36□□□□□ -0.75
CCDC40-215ENST00000576033 EIF4A1P60842 406 aaKnown RBP10.36□□□□□ -0.75
CCDC40-215ENST00000576033 WWC1Q8IX03 1113 aa10.36□□□□□ -0.75
CCDC40-215ENST00000576033 NECTIN2Q92692 538 aa10.36□□□□□ -0.75
CCDC40-215ENST00000576033 FMNL2Q96PY5 1086 aa10.36□□□□□ -0.75
CCDC40-215ENST00000576033 MBIPQ9NS73 344 aa10.36□□□□□ -0.75
CCDC40-215ENST00000576033 SRP68Q9UHB9 627 aaKnown RBP10.36□□□□□ -0.75
CCDC40-215ENST00000576033 ATF5Q9Y2D1 282 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-215ENST00000576033 ANXA1P04083 346 aa10.35□□□□□ -0.75
CCDC40-215ENST00000576033 CANXP27824 592 aaKnown RBP10.35□□□□□ -0.75
CCDC40-215ENST00000576033 LMOD3Q0VAK6 560 aa10.35□□□□□ -0.75
CCDC40-215ENST00000576033 COL15A1P39059 1388 aa10.35□□□□□ -0.75
CCDC40-215ENST00000576033 SOS1Q07889 1333 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-215ENST00000576033 NBPF26B4DH59 902 aa10.34□□□□□ -0.75
CCDC40-215ENST00000576033 CHL1O00533 1208 aa10.34□□□□□ -0.75
CCDC40-215ENST00000576033 ZNF853P0CG23 659 aa10.34□□□□□ -0.75
CCDC40-215ENST00000576033 PROSER3Q2NL68 480 aa10.34□□□□□ -0.75
CCDC40-215ENST00000576033 NBPF10Q6P3W6 841 aaKnown RBP10.34□□□□□ -0.75
CCDC40-215ENST00000576033 NBPF15Q8N660 670 aa10.34□□□□□ -0.75
CCDC40-215ENST00000576033 CCDC87Q9NVE4 849 aa10.34□□□□□ -0.75
CCDC40-215ENST00000576033 ZNF330Q9Y3S2 320 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-215ENST00000576033 ZNF521Q96K83 1311 aa10.33□□□□□ -0.76
CCDC40-215ENST00000576033 FANCIQ9NVI1 1328 aa10.33□□□□□ -0.76
CCDC40-215ENST00000576033 AFDNP55196 1824 aaKnown RBP10.33□□□□□ -0.76
CCDC40-215ENST00000576033 ELL2O00472 640 aaPredicted RBP10.33□□□□□ -0.76
CCDC40-215ENST00000576033 GIGYF1O75420 1035 aaPredicted RBP10.33□□□□□ -0.76
CCDC40-215ENST00000576033 PTGER2P43116 358 aa10.33□□□□□ -0.76
CCDC40-215ENST00000576033 TSPYL6Q8N831 410 aa10.33□□□□□ -0.76
CCDC40-215ENST00000576033 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
CCDC40-215ENST00000576033 KIAA1551Q9HCM1 1747 aa10.33□□□□□ -0.76
CCDC40-215ENST00000576033 TCERG1O14776 1098 aaKnown RBP10.32□□□□□ -0.76
CCDC40-215ENST00000576033 RPS6KA4O75676 772 aa10.32□□□□□ -0.76
CCDC40-215ENST00000576033 VSIG10Q8N0Z9 540 aa10.32□□□□□ -0.76
CCDC40-215ENST00000576033 C8orf58Q8NAV2 365 aa10.32□□□□□ -0.76
CCDC40-215ENST00000576033 CFAP44Q96MT7 982 aa10.32□□□□□ -0.76
CCDC40-215ENST00000576033 YTHDC1Q96MU7 727 aaKnown RBP10.32□□□□□ -0.76
CCDC40-215ENST00000576033 IFT57Q9NWB7 429 aa10.32□□□□□ -0.76
CCDC40-215ENST00000576033 RTCBQ9Y3I0 505 aaKnown RBP10.32□□□□□ -0.76
CCDC40-215ENST00000576033 ARFGEF2Q9Y6D5 1785 aa10.31□□□□□ -0.76
CCDC40-215ENST00000576033 SNRPA1P09661 255 aaKnown RBP10.31□□□□□ -0.76
CCDC40-215ENST00000576033 MYL6BP14649 208 aa10.31□□□□□ -0.76
CCDC40-215ENST00000576033 EIF2S2P20042 333 aaKnown RBP10.31□□□□□ -0.76
CCDC40-215ENST00000576033 SSFA2P28290 1259 aa10.31□□□□□ -0.76
CCDC40-215ENST00000576033 CCDC27Q2M243 656 aa10.31□□□□□ -0.76
CCDC40-215ENST00000576033 RC3H1Q5TC82 1133 aaKnown RBP10.31□□□□□ -0.76
CCDC40-215ENST00000576033 NGEFQ8N5V2 710 aa10.31□□□□□ -0.76
CCDC40-215ENST00000576033 CDCA7LQ96GN5 454 aa10.31□□□□□ -0.76
CCDC40-215ENST00000576033 SGIP1Q9BQI5 828 aa10.31□□□□□ -0.76
CCDC40-215ENST00000576033 BCL2L12Q9HB09 334 aa10.31□□□□□ -0.76
CCDC40-215ENST00000576033 ANKRD36CQ5JPF3 1778 aa10.31□□□□□ -0.76
CCDC40-215ENST00000576033 USP42Q9H9J4 1324 aaKnown RBP10.31□□□□□ -0.76
CCDC40-215ENST00000576033 NUP98P52948 1817 aa10.3□□□□□ -0.76
CCDC40-215ENST00000576033 N4BP2Q86UW6 1770 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-215ENST00000576033 GYS1P13807 737 aa10.3□□□□□ -0.76
CCDC40-215ENST00000576033 FKBP8Q14318 412 aa10.3□□□□□ -0.76
CCDC40-215ENST00000576033 PDIA6Q15084 440 aa10.3□□□□□ -0.76
CCDC40-215ENST00000576033 USPL1Q5W0Q7 1092 aa10.3□□□□□ -0.76
CCDC40-215ENST00000576033 ZNF428Q96B54 188 aa10.3□□□□□ -0.76
CCDC40-215ENST00000576033 TBC1D2BQ9UPU7 963 aa10.3□□□□□ -0.76
CCDC40-215ENST00000576033 COL11A2P13942 1736 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-215ENST00000576033 ANKRD31Q8N7Z5 1873 aa10.3□□□□□ -0.76
CCDC40-215ENST00000576033 TNRC6CQ9HCJ0 1690 aaKnown RBP10.29□□□□□ -0.76
CCDC40-215ENST00000576033 STARD3NLO95772 234 aa10.29□□□□□ -0.76
CCDC40-215ENST00000576033 EIF5P55010 431 aaKnown RBP10.29□□□□□ -0.76
CCDC40-215ENST00000576033 TRAPPC3LQ5T215 181 aa10.29□□□□□ -0.76
CCDC40-215ENST00000576033 DUSP27Q5VZP5 1158 aa10.29□□□□□ -0.76
CCDC40-215ENST00000576033 TTLL7Q6ZT98 887 aa10.29□□□□□ -0.76
CCDC40-215ENST00000576033 LRP10Q7Z4F1 713 aa10.29□□□□□ -0.76
CCDC40-215ENST00000576033 MTFR1LQ9H019 292 aa10.29□□□□□ -0.76
CCDC40-215ENST00000576033 CHPF2Q9P2E5 772 aa10.29□□□□□ -0.76
CCDC40-215ENST00000576033 NRXN2Q9P2S2 1712 aa10.29□□□□□ -0.76
CCDC40-215ENST00000576033 KIF13BQ9NQT8 1826 aa10.28□□□□□ -0.76
CCDC40-215ENST00000576033 CARMIL3Q8ND23 1372 aa10.28□□□□□ -0.76
CCDC40-215ENST00000576033 GNAI1P63096 354 aa10.28□□□□□ -0.76
CCDC40-215ENST00000576033 HNRNPUQ00839 825 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCDC40-215ENST00000576033 EXOSC9Q06265 439 aaKnown RBP10.28□□□□□ -0.76
CCDC40-215ENST00000576033 DDR1Q08345 913 aa10.28□□□□□ -0.76
CCDC40-215ENST00000576033 ARXQ96QS3 562 aa10.28□□□□□ -0.76
CCDC40-215ENST00000576033 CAMTA2O94983 1202 aa10.27□□□□□ -0.77
CCDC40-215ENST00000576033 RFC4P35249 363 aa10.27□□□□□ -0.77
CCDC40-215ENST00000576033 HLFQ16534 295 aa10.27□□□□□ -0.77
CCDC40-215ENST00000576033 HDGFL1Q5TGJ6 251 aa10.27□□□□□ -0.77
CCDC40-215ENST00000576033 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
CCDC40-215ENST00000576033 CCDC24Q8N4L8 307 aa10.27□□□□□ -0.77
CCDC40-215ENST00000576033 SPON1Q9HCB6 807 aa10.27□□□□□ -0.77
CCDC40-215ENST00000576033 CACNA1SQ13698 1873 aa10.27□□□□□ -0.77
CCDC40-215ENST00000576033 IL16Q14005 1332 aa10.27□□□□□ -0.77
CCDC40-215ENST00000576033 MMP10P09238 476 aa10.26□□□□□ -0.77
CCDC40-215ENST00000576033 IL6STP40189 918 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-215ENST00000576033 TBC1D9BQ66K14 1250 aa10.26□□□□□ -0.77
CCDC40-215ENST00000576033 BICDL1Q6ZP65 573 aa10.26□□□□□ -0.77
CCDC40-215ENST00000576033 DZIP3Q86Y13 1208 aaKnown RBP10.26□□□□□ -0.77
CCDC40-215ENST00000576033 WDR63Q8IWG1 891 aa10.26□□□□□ -0.77
CCDC40-215ENST00000576033 ZBTB3Q9H5J0 574 aa10.26□□□□□ -0.77
CCDC40-215ENST00000576033 BABAM1Q9NWV8 329 aa10.26□□□□□ -0.77
CCDC40-215ENST00000576033 WWC3Q9ULE0 1092 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms