RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-215ENST00000575857 POLD1P28340 1107 aa14.18□□□□□ -0.14
SLC12A4-215ENST00000575857 EIF4A1P60842 406 aaKnown RBP14.18□□□□□ -0.14
SLC12A4-215ENST00000575857 COL23A1Q86Y22 540 aaPredicted RBP14.18□□□□□ -0.14
SLC12A4-215ENST00000575857 SLC16A10Q8TF71 515 aa14.18□□□□□ -0.14
SLC12A4-215ENST00000575857 MSH5O43196 834 aa14.17□□□□□ -0.14
SLC12A4-215ENST00000575857 YBX3P16989 372 aaKnown RBP eCLIP14.17□□□□□ -0.14
SLC12A4-215ENST00000575857 C1QTNF8P60827 252 aa14.17□□□□□ -0.14
SLC12A4-215ENST00000575857 RC3H1Q5TC82 1133 aaKnown RBP14.17□□□□□ -0.14
SLC12A4-215ENST00000575857 NGEFQ8N5V2 710 aa14.17□□□□□ -0.14
SLC12A4-215ENST00000575857 CFAP44Q96MT7 982 aa14.17□□□□□ -0.14
SLC12A4-215ENST00000575857 TSPYL4Q9UJ04 414 aa14.17□□□□□ -0.14
SLC12A4-215ENST00000575857 TUBGCP6Q96RT7 1819 aa14.17□□□□□ -0.14
SLC12A4-215ENST00000575857 ZNF521Q96K83 1311 aa14.16□□□□□ -0.14
SLC12A4-215ENST00000575857 PRAMEF22A3QJZ6 481 aa14.16□□□□□ -0.14
SLC12A4-215ENST00000575857 CRKLP46109 303 aaKnown RBP14.16□□□□□ -0.14
SLC12A4-215ENST00000575857 CALD1Q05682 793 aaKnown RBP14.16□□□□□ -0.14
SLC12A4-215ENST00000575857 INTS5Q6P9B9 1019 aaKnown RBP14.16□□□□□ -0.14
SLC12A4-215ENST00000575857 SMIM5Q71RC9 77 aa14.16□□□□□ -0.14
SLC12A4-215ENST00000575857 IFT57Q9NWB7 429 aa14.16□□□□□ -0.14
SLC12A4-215ENST00000575857 IL16Q14005 1332 aa14.15□□□□□ -0.14
SLC12A4-215ENST00000575857 MYH14Q7Z406 1995 aaKnown RBP14.15□□□□□ -0.14
SLC12A4-215ENST00000575857 GIGYF1O75420 1035 aaPredicted RBP14.15□□□□□ -0.14
SLC12A4-215ENST00000575857 TEX13AQ9BXU3 409 aaPredicted RBP14.15□□□□□ -0.14
SLC12A4-215ENST00000575857 SALL2Q9Y467 1007 aaPredicted RBP14.15□□□□□ -0.14
SLC12A4-215ENST00000575857 QSER1Q2KHR3 1735 aa14.15□□□□□ -0.14
SLC12A4-215ENST00000575857 RPS6KA4O75676 772 aa14.14□□□□□ -0.15
SLC12A4-215ENST00000575857 SNRPA1P09661 255 aaKnown RBP14.14□□□□□ -0.15
SLC12A4-215ENST00000575857 WDR63Q8IWG1 891 aa14.14□□□□□ -0.15
SLC12A4-215ENST00000575857 AK7Q96M32 723 aa14.14□□□□□ -0.15
SLC12A4-215ENST00000575857 MBIPQ9NS73 344 aa14.14□□□□□ -0.15
SLC12A4-215ENST00000575857 USP16Q9Y5T5 823 aa14.14□□□□□ -0.15
SLC12A4-215ENST00000575857 UBR3Q6ZT12 1888 aa14.13□□□□□ -0.15
SLC12A4-215ENST00000575857 GNPATO15228 680 aa14.13□□□□□ -0.15
SLC12A4-215ENST00000575857 SSFA2P28290 1259 aa14.13□□□□□ -0.15
SLC12A4-215ENST00000575857 GNAI1P63096 354 aa14.13□□□□□ -0.15
SLC12A4-215ENST00000575857 CCDC87Q9NVE4 849 aa14.13□□□□□ -0.15
SLC12A4-215ENST00000575857 ZBTB1Q9Y2K1 713 aa14.13□□□□□ -0.15
SLC12A4-215ENST00000575857 LAS1LQ9Y4W2 734 aaKnown RBP14.13□□□□□ -0.15
SLC12A4-215ENST00000575857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
SLC12A4-215ENST00000575857 STARD3NLO95772 234 aa14.12□□□□□ -0.15
SLC12A4-215ENST00000575857 KRT24Q2M2I5 525 aa14.12□□□□□ -0.15
SLC12A4-215ENST00000575857 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
SLC12A4-215ENST00000575857 COL24A1Q17RW2 1714 aa14.12□□□□□ -0.15
SLC12A4-215ENST00000575857 SOS1Q07889 1333 aaPredicted RBP14.12□□□□□ -0.15
SLC12A4-215ENST00000575857 FLAD1Q8NFF5 587 aa14.11□□□□□ -0.15
SLC12A4-215ENST00000575857 WWC3Q9ULE0 1092 aa14.11□□□□□ -0.15
SLC12A4-215ENST00000575857 RTCBQ9Y3I0 505 aaKnown RBP14.11□□□□□ -0.15
SLC12A4-215ENST00000575857 A1BGP04217 495 aa14.1□□□□□ -0.15
SLC12A4-215ENST00000575857 ADRA2BP18089 450 aa14.1□□□□□ -0.15
SLC12A4-215ENST00000575857 EIF5P55010 431 aaKnown RBP14.1□□□□□ -0.15
SLC12A4-215ENST00000575857 NBPF26B4DH59 902 aa14.09□□□□□ -0.15
SLC12A4-215ENST00000575857 PHF14O94880 888 aa14.09□□□□□ -0.15
SLC12A4-215ENST00000575857 NBPF10Q6P3W6 841 aaKnown RBP14.09□□□□□ -0.15
SLC12A4-215ENST00000575857 NBPF15Q8N660 670 aa14.09□□□□□ -0.15
SLC12A4-215ENST00000575857 ARHGEF1Q92888 912 aaKnown RBP14.09□□□□□ -0.15
SLC12A4-215ENST00000575857 TSR2Q969E8 191 aaKnown RBP14.09□□□□□ -0.15
SLC12A4-215ENST00000575857 LAMB4A4D0S4 1761 aa14.09□□□□□ -0.15
SLC12A4-215ENST00000575857 CHD4Q14839 1912 aa14.08□□□□□ -0.16
SLC12A4-215ENST00000575857 HOXB7P09629 217 aa14.08□□□□□ -0.16
SLC12A4-215ENST00000575857 CANXP27824 592 aaKnown RBP14.08□□□□□ -0.16
SLC12A4-215ENST00000575857 IL6STP40189 918 aaPredicted RBP14.08□□□□□ -0.16
SLC12A4-215ENST00000575857 TRAPPC3LQ5T215 181 aa14.08□□□□□ -0.16
SLC12A4-215ENST00000575857 C8orf58Q8NAV2 365 aa14.08□□□□□ -0.16
SLC12A4-215ENST00000575857 FANCIQ9NVI1 1328 aa14.08□□□□□ -0.16
SLC12A4-215ENST00000575857 DUSP27Q5VZP5 1158 aa14.07□□□□□ -0.16
SLC12A4-215ENST00000575857 LRP10Q7Z4F1 713 aa14.07□□□□□ -0.16
SLC12A4-215ENST00000575857 COL15A1P39059 1388 aa14.07□□□□□ -0.16
SLC12A4-215ENST00000575857 CEP350Q5VT06 3117 aa14.06□□□□□ -0.16
SLC12A4-215ENST00000575857 PIP4K2AP48426 406 aaPredicted RBP14.06□□□□□ -0.16
SLC12A4-215ENST00000575857 PDIA6Q15084 440 aa14.06□□□□□ -0.16
SLC12A4-215ENST00000575857 ERBB4Q15303 1308 aa14.06□□□□□ -0.16
SLC12A4-215ENST00000575857 C4AP0C0L4 1744 aa14.05□□□□□ -0.16
SLC12A4-215ENST00000575857 TSPYL6Q8N831 410 aa14.05□□□□□ -0.16
SLC12A4-215ENST00000575857 SRP68Q9UHB9 627 aaKnown RBP14.05□□□□□ -0.16
SLC12A4-215ENST00000575857 USP42Q9H9J4 1324 aaKnown RBP14.05□□□□□ -0.16
SLC12A4-215ENST00000575857 ATP10DQ9P241 1426 aa14.05□□□□□ -0.16
SLC12A4-215ENST00000575857 GRIN3BO60391 1043 aa14.04□□□□□ -0.16
SLC12A4-215ENST00000575857 GYS1P13807 737 aa14.04□□□□□ -0.16
SLC12A4-215ENST00000575857 EIF2S2P20042 333 aaKnown RBP14.04□□□□□ -0.16
SLC12A4-215ENST00000575857 GOLGA2Q08379 1002 aa14.04□□□□□ -0.16
SLC12A4-215ENST00000575857 SLFN5Q08AF3 891 aa14.04□□□□□ -0.16
SLC12A4-215ENST00000575857 TRMT2AQ8IZ69 625 aaKnown RBP14.04□□□□□ -0.16
SLC12A4-215ENST00000575857 ZNF526Q8TF50 670 aaPredicted RBP14.04□□□□□ -0.16
SLC12A4-215ENST00000575857 MYH16Q9H6N6 1097 aa14.04□□□□□ -0.16
SLC12A4-215ENST00000575857 BCL2L12Q9HB09 334 aa14.04□□□□□ -0.16
SLC12A4-215ENST00000575857 NARFQ9UHQ1 456 aa14.04□□□□□ -0.16
SLC12A4-215ENST00000575857 E9PSI1 815 aa14.03□□□□□ -0.16
SLC12A4-215ENST00000575857 ELL2O00472 640 aaPredicted RBP14.03□□□□□ -0.16
SLC12A4-215ENST00000575857 RFC4P35249 363 aa14.03□□□□□ -0.16
SLC12A4-215ENST00000575857 HNRNPUQ00839 825 aaKnown RBP eCLIP14.03□□□□□ -0.16
SLC12A4-215ENST00000575857 PROSER3Q2NL68 480 aa14.03□□□□□ -0.16
SLC12A4-215ENST00000575857 HDGFL1Q5TGJ6 251 aa14.03□□□□□ -0.16
SLC12A4-215ENST00000575857 CDCA7LQ96GN5 454 aa14.03□□□□□ -0.16
SLC12A4-215ENST00000575857 CD2APQ9Y5K6 639 aa14.03□□□□□ -0.16
SLC12A4-215ENST00000575857 A0A087WZG4 1122 aa14.02□□□□□ -0.17
SLC12A4-215ENST00000575857 EXOSC9Q06265 439 aaKnown RBP14.02□□□□□ -0.17
SLC12A4-215ENST00000575857 CAMTA2O94983 1202 aa14.01□□□□□ -0.17
SLC12A4-215ENST00000575857 ANXA1P04083 346 aa14.01□□□□□ -0.17
SLC12A4-215ENST00000575857 FKBP8Q14318 412 aa14.01□□□□□ -0.17
SLC12A4-215ENST00000575857 TWISTNBQ3B726 338 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms